RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 K7EIL1 84 aa1.8□□□□□ -2.12
VPS8-217ENST00000465213 MRPL33O75394 65 aaKnown RBP1.8□□□□□ -2.12
VPS8-217ENST00000465213 PLNP26678 52 aa1.8□□□□□ -2.12
VPS8-217ENST00000465213 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
VPS8-217ENST00000465213 MGAQ8IWI9 3026 aa1.8□□□□□ -2.12
VPS8-217ENST00000465213 TNCP24821 2201 aa1.8□□□□□ -2.12
VPS8-217ENST00000465213 AHCTF1Q8WYP5 2266 aa1.8□□□□□ -2.12
VPS8-217ENST00000465213 SPTBN1Q01082 2364 aaKnown RBP1.8□□□□□ -2.12
VPS8-217ENST00000465213 LAMA1P25391 3075 aa1.8□□□□□ -2.12
VPS8-217ENST00000465213 ETDCA0A1B0GVM5 59 aa1.79□□□□□ -2.12
VPS8-217ENST00000465213 KRTAP12-3P60328 96 aa1.79□□□□□ -2.12
VPS8-217ENST00000465213 IGIPA6NJ69 53 aa1.78□□□□□ -2.12
VPS8-217ENST00000465213 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
VPS8-217ENST00000465213 CUBNO60494 3623 aa1.78□□□□□ -2.12
VPS8-217ENST00000465213 COL6A6A6NMZ7 2263 aa1.78□□□□□ -2.13
VPS8-217ENST00000465213 FAT4Q6V0I7 4981 aa1.77□□□□□ -2.13
VPS8-217ENST00000465213 SVEP1Q4LDE5 3571 aa1.77□□□□□ -2.13
VPS8-217ENST00000465213 SONP18583 2426 aaKnown RBP1.77□□□□□ -2.13
VPS8-217ENST00000465213 KNTC1P50748 2209 aa1.77□□□□□ -2.13
VPS8-217ENST00000465213 DEFB131BA0A096LNP1 70 aa1.77□□□□□ -2.13
VPS8-217ENST00000465213 KRTAP4-1Q9BYQ7 146 aa1.77□□□□□ -2.13
VPS8-217ENST00000465213 ABRACLQ9P1F3 81 aa1.77□□□□□ -2.13
VPS8-217ENST00000465213 FLG2Q5D862 2391 aaPredicted RBP1.77□□□□□ -2.13
VPS8-217ENST00000465213 FAM208AQ9UK61 1670 aaKnown RBP1.77□□□□□ -2.13
VPS8-217ENST00000465213 AKAP9Q99996 3911 aa1.76□□□□□ -2.13
VPS8-217ENST00000465213 M0R1W7 72 aa1.76□□□□□ -2.13
VPS8-217ENST00000465213 DDX60LQ5H9U9 1706 aaKnown RBP1.76□□□□□ -2.13
VPS8-217ENST00000465213 URB1O60287 2271 aaKnown RBP1.75□□□□□ -2.13
VPS8-217ENST00000465213 GOLGA4Q13439 2230 aaKnown RBP1.75□□□□□ -2.13
VPS8-217ENST00000465213 FCGBPQ9Y6R7 5405 aaPredicted RBP1.75□□□□□ -2.13
VPS8-217ENST00000465213 SMIM27A0A1W2PRY6 76 aa1.75□□□□□ -2.13
VPS8-217ENST00000465213 ARL14EPLP0DKL9 152 aa1.75□□□□□ -2.13
VPS8-217ENST00000465213 USMG5Q96IX5 58 aa1.75□□□□□ -2.13
VPS8-217ENST00000465213 CRIPTQ9P021 101 aa1.75□□□□□ -2.13
VPS8-217ENST00000465213 APC2O95996 2303 aa1.75□□□□□ -2.13
VPS8-217ENST00000465213 I3L3M4 83 aa1.74□□□□□ -2.13
VPS8-217ENST00000465213 NEBP20929 6669 aa1.74□□□□□ -2.13
VPS8-217ENST00000465213 COX6B1P14854 86 aa1.73□□□□□ -2.13
VPS8-217ENST00000465213 KRTAP6-3Q3LI67 103 aa1.73□□□□□ -2.13
VPS8-217ENST00000465213 PIGYQ3MUY2 71 aa1.73□□□□□ -2.13
VPS8-217ENST00000465213 TP53AIP1Q9HCN2 124 aa1.73□□□□□ -2.13
VPS8-217ENST00000465213 C4AP0C0L4 1744 aa1.73□□□□□ -2.13
VPS8-217ENST00000465213 DMBT1Q9UGM3 2413 aaPredicted RBP1.72□□□□□ -2.13
VPS8-217ENST00000465213 ACACAQ13085 2346 aa1.72□□□□□ -2.13
VPS8-217ENST00000465213 CNTRLQ7Z7A1 2325 aa1.72□□□□□ -2.13
VPS8-217ENST00000465213 I3L2K1 104 aa1.72□□□□□ -2.13
VPS8-217ENST00000465213 COX6B2Q6YFQ2 88 aa1.72□□□□□ -2.13
VPS8-217ENST00000465213 LINC01546A6NGU7 62 aa1.71□□□□□ -2.14
VPS8-217ENST00000465213 H0YGX0 51 aa1.71□□□□□ -2.14
VPS8-217ENST00000465213 LYNX1P0DP58 116 aa1.71□□□□□ -2.14
VPS8-217ENST00000465213 CNFNQ9BYD5 112 aa1.71□□□□□ -2.14
VPS8-217ENST00000465213 TOGARAM1Q9Y4F4 1720 aa1.71□□□□□ -2.14
VPS8-217ENST00000465213 NFAT5O94916 1531 aa1.71□□□□□ -2.14
VPS8-217ENST00000465213 LOC730098B7Z3J9 87 aa1.7□□□□□ -2.14
VPS8-217ENST00000465213 ANK2Q01484 3957 aa1.7□□□□□ -2.14
VPS8-217ENST00000465213 K7EQZ3 153 aa1.69□□□□□ -2.14
VPS8-217ENST00000465213 CCL22O00626 93 aa1.69□□□□□ -2.14
VPS8-217ENST00000465213 SSPOA2VEC9 5147 aa1.68□□□□□ -2.14
VPS8-217ENST00000465213 VPS13CQ709C8 3753 aa1.68□□□□□ -2.14
VPS8-217ENST00000465213 RNF213Q63HN8 5207 aa1.68□□□□□ -2.14
VPS8-217ENST00000465213 TACC2O95359 2948 aa1.67□□□□□ -2.14
VPS8-217ENST00000465213 SYNE2Q8WXH0 6885 aaKnown RBP1.67□□□□□ -2.14
VPS8-217ENST00000465213 MRPL34Q9BQ48 92 aaKnown RBP1.67□□□□□ -2.14
VPS8-217ENST00000465213 PRKDCP78527 4128 aaKnown RBP1.67□□□□□ -2.14
VPS8-217ENST00000465213 C4BP0C0L5 1744 aa1.66□□□□□ -2.14
VPS8-217ENST00000465213 CDC42BPAQ5VT25 1732 aa1.66□□□□□ -2.14
VPS8-217ENST00000465213 SPINK9Q5DT21 86 aa1.66□□□□□ -2.14
VPS8-217ENST00000465213 CRIP1P50238 77 aa1.65□□□□□ -2.15
VPS8-217ENST00000465213 COL7A1Q02388 2944 aa1.65□□□□□ -2.15
VPS8-217ENST00000465213 STAB2Q8WWQ8 2551 aa1.64□□□□□ -2.15
VPS8-217ENST00000465213 Q8IZM0 81 aa1.63□□□□□ -2.15
VPS8-217ENST00000465213 C10orf95Q9H7T3 257 aa1.63□□□□□ -2.15
VPS8-217ENST00000465213 CDKN2A-AS1Q9UH64 79 aa1.63□□□□□ -2.15
VPS8-217ENST00000465213 LYNX1G3V0Z9 82 aa1.62□□□□□ -2.15
VPS8-217ENST00000465213 COX6A2Q02221 97 aa1.62□□□□□ -2.15
VPS8-217ENST00000465213 TMEM167BQ9NRX6 74 aa1.62□□□□□ -2.15
VPS8-217ENST00000465213 LINC00158P58513 81 aa1.61□□□□□ -2.15
VPS8-217ENST00000465213 GCC2Q8IWJ2 1684 aa1.61□□□□□ -2.15
VPS8-217ENST00000465213 MACF1Q9UPN3 7388 aaKnown RBP1.61□□□□□ -2.15
VPS8-217ENST00000465213 KRTAP20-1Q3LI63 56 aa1.6□□□□□ -2.15
VPS8-217ENST00000465213 PRO0255Q9UI72 69 aa1.6□□□□□ -2.15
VPS8-217ENST00000465213 SORL1Q92673 2214 aa1.6□□□□□ -2.15
VPS8-217ENST00000465213 DDX60Q8IY21 1712 aaKnown RBP1.6□□□□□ -2.15
VPS8-217ENST00000465213 Q5VSD8 79 aa1.58□□□□□ -2.16
VPS8-217ENST00000465213 DEFB124Q8NES8 71 aa1.58□□□□□ -2.16
VPS8-217ENST00000465213 DNAH1Q9P2D7 4330 aa1.58□□□□□ -2.16
VPS8-217ENST00000465213 SACSQ9NZJ4 4579 aa1.57□□□□□ -2.16
VPS8-217ENST00000465213 DYNC2H1Q8NCM8 4307 aaKnown RBP1.57□□□□□ -2.16
VPS8-217ENST00000465213 NDUFA3O95167 84 aa1.57□□□□□ -2.16
VPS8-217ENST00000465213 HMCN2Q8NDA2 5059 aa1.56□□□□□ -2.16
VPS8-217ENST00000465213 Q6ZSA8 131 aa1.56□□□□□ -2.16
VPS8-217ENST00000465213 SMR3AQ99954 134 aa1.56□□□□□ -2.16
VPS8-217ENST00000465213 DUOX1Q9NRD9 1551 aa1.55□□□□□ -2.16
VPS8-217ENST00000465213 SPINK4O60575 86 aa1.55□□□□□ -2.16
VPS8-217ENST00000465213 SNRPGP62308 76 aaKnown RBP1.55□□□□□ -2.16
VPS8-217ENST00000465213 TIMM8BQ9Y5J9 83 aaPredicted RBP1.55□□□□□ -2.16
VPS8-217ENST00000465213 SRRM2Q9UQ35 2752 aaKnown RBP1.55□□□□□ -2.16
VPS8-217ENST00000465213 ALMS1Q8TCU4 4167 aa1.54□□□□□ -2.16
VPS8-217ENST00000465213 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
VPS8-217ENST00000465213 LINC00308Q8TCZ7 52 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms