RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 COX6B2Q6YFQ2 88 aa11.43□□□□□ -0.58
UBA3-206ENST00000464605 IGHV6-1A0A0B4J1U7 121 aa11.42□□□□□ -0.58
UBA3-206ENST00000464605 LORP23490 312 aaPredicted RBP11.42□□□□□ -0.58
UBA3-206ENST00000464605 LYRM7Q5U5X0 104 aa11.42□□□□□ -0.58
UBA3-206ENST00000464605 C9orf118A6NHY6 69 aa11.4□□□□□ -0.58
UBA3-206ENST00000464605 TAX1BP3O14907 124 aa11.4□□□□□ -0.58
UBA3-206ENST00000464605 C21orf62-AS1Q17RA5 79 aa11.4□□□□□ -0.58
UBA3-206ENST00000464605 A0A1B0GVX0 72 aa11.39□□□□□ -0.59
UBA3-206ENST00000464605 KRTAP10-6P60371 365 aaPredicted RBP11.39□□□□□ -0.59
UBA3-206ENST00000464605 C14orf132Q9NPU4 83 aa11.36□□□□□ -0.59
UBA3-206ENST00000464605 A0A1B0GW54 56 aa11.35□□□□□ -0.59
UBA3-206ENST00000464605 J3KT08 172 aa11.35□□□□□ -0.59
UBA3-206ENST00000464605 PDE6GP18545 87 aa11.35□□□□□ -0.59
UBA3-206ENST00000464605 C8orf87E5RJ46 101 aa11.34□□□□□ -0.59
UBA3-206ENST00000464605 A0A1W2PPM0 123 aa11.33□□□□□ -0.6
UBA3-206ENST00000464605 M0R2T5 61 aa11.29□□□□□ -0.6
UBA3-206ENST00000464605 H3BT86 120 aa11.27□□□□□ -0.61
UBA3-206ENST00000464605 MTURNQ8N3F0 131 aa11.27□□□□□ -0.61
UBA3-206ENST00000464605 A8MWP4 228 aa11.24□□□□□ -0.61
UBA3-206ENST00000464605 IGKV3D-7A0A0C4DH55 119 aa11.23□□□□□ -0.61
UBA3-206ENST00000464605 NDUFB1O75438 58 aa11.23□□□□□ -0.61
UBA3-206ENST00000464605 Q8N9P0 234 aaPredicted RBP11.21□□□□□ -0.61
UBA3-206ENST00000464605 HRES1P13985 223 aa11.2□□□□□ -0.62
UBA3-206ENST00000464605 MPLKIPQ8TAP9 179 aa11.2□□□□□ -0.62
UBA3-206ENST00000464605 C8orf17Q9NRJ1 99 aa11.2□□□□□ -0.62
UBA3-206ENST00000464605 NREPQ16612 68 aa11.18□□□□□ -0.62
UBA3-206ENST00000464605 ZCCHC13Q8WW36 166 aaKnown RBP11.17□□□□□ -0.62
UBA3-206ENST00000464605 SPCS1Q9Y6A9 102 aa11.16□□□□□ -0.62
UBA3-206ENST00000464605 PRR15Q8IV56 129 aa11.15□□□□□ -0.62
UBA3-206ENST00000464605 SMCPP49901 116 aaPredicted RBP11.14□□□□□ -0.63
UBA3-206ENST00000464605 COL5A1-AS1Q5SY13 56 aa11.11□□□□□ -0.63
UBA3-206ENST00000464605 Q6ZVQ6 151 aa11.1□□□□□ -0.63
UBA3-206ENST00000464605 MMP24-AS1A0A0U1RRL7 71 aa11.08□□□□□ -0.64
UBA3-206ENST00000464605 PRO0461Q9UI25 63 aa11.07□□□□□ -0.64
UBA3-206ENST00000464605 RBM12B-AS1Q9P1G2 102 aa11.06□□□□□ -0.64
UBA3-206ENST00000464605 K7EQZ3 153 aa11.05□□□□□ -0.64
UBA3-206ENST00000464605 SPINK7P58062 85 aa11.05□□□□□ -0.64
UBA3-206ENST00000464605 FAM236DA0A1B0GTK5 79 aa11.04□□□□□ -0.64
UBA3-206ENST00000464605 FAM236CP0DP71 79 aa11.04□□□□□ -0.64
UBA3-206ENST00000464605 KRTAP9-8Q9BYQ0 159 aa11.03□□□□□ -0.64
UBA3-206ENST00000464605 TMEM254Q8TBM7 123 aa11.02□□□□□ -0.65
UBA3-206ENST00000464605 K7EP34 96 aa11.01□□□□□ -0.65
UBA3-206ENST00000464605 MRPL34Q9BQ48 92 aaKnown RBP11.01□□□□□ -0.65
UBA3-206ENST00000464605 BPY2O14599 106 aa10.99□□□□□ -0.65
UBA3-206ENST00000464605 hDV103S1A0JD37 113 aa10.97□□□□□ -0.65
UBA3-206ENST00000464605 Q8N9L7 120 aa10.91□□□□□ -0.66
UBA3-206ENST00000464605 LINC00846Q9NV44 126 aa10.9□□□□□ -0.66
UBA3-206ENST00000464605 PCP4L1A6NKN8 68 aa10.89□□□□□ -0.67
UBA3-206ENST00000464605 WFDC13Q8IUB5 93 aa10.87□□□□□ -0.67
UBA3-206ENST00000464605 MT2AP02795 61 aa10.86□□□□□ -0.67
UBA3-206ENST00000464605 NDUFS5O43920 106 aa10.85□□□□□ -0.67
UBA3-206ENST00000464605 Q5W150 140 aa10.84□□□□□ -0.67
UBA3-206ENST00000464605 GTF2H5Q6ZYL4 71 aa10.83□□□□□ -0.68
UBA3-206ENST00000464605 USH2AO75445 5202 aa10.81□□□□□ -0.68
UBA3-206ENST00000464605 CASC2Q6XLA1 102 aa10.81□□□□□ -0.68
UBA3-206ENST00000464605 UBL5Q9BZL1 73 aa10.81□□□□□ -0.68
UBA3-206ENST00000464605 F8W1H4 67 aa10.8□□□□□ -0.68
UBA3-206ENST00000464605 MT1FP04733 61 aa10.78□□□□□ -0.68
UBA3-206ENST00000464605 SSPOA2VEC9 5147 aa10.76□□□□□ -0.69
UBA3-206ENST00000464605 ETDBQ3ZM63 59 aa10.76□□□□□ -0.69
UBA3-206ENST00000464605 HCG22E2RYF7 251 aa10.75□□□□□ -0.69
UBA3-206ENST00000464605 KRTAP9-7A8MTY7 169 aa10.74□□□□□ -0.69
UBA3-206ENST00000464605 IGKV2D-30A0A075B6S6 120 aa10.7□□□□□ -0.7
UBA3-206ENST00000464605 IGKV2-30P06310 120 aa10.7□□□□□ -0.7
UBA3-206ENST00000464605 KRTAP9-3Q9BYQ3 159 aa10.69□□□□□ -0.7
UBA3-206ENST00000464605 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.68□□□□□ -0.7
UBA3-206ENST00000464605 C7orf65Q6ZTY9 151 aa10.68□□□□□ -0.7
UBA3-206ENST00000464605 KRTAP10-10P60014 251 aa10.67□□□□□ -0.7
UBA3-206ENST00000464605 CXCL6P80162 114 aa10.67□□□□□ -0.7
UBA3-206ENST00000464605 H1FX-AS1Q4G0G2 97 aa10.64□□□□□ -0.71
UBA3-206ENST00000464605 LCE2BO14633 110 aa10.62□□□□□ -0.71
UBA3-206ENST00000464605 FCGBPQ9Y6R7 5405 aaPredicted RBP10.54□□□□□ -0.72
UBA3-206ENST00000464605 C4orf26Q17RF5 130 aa10.54□□□□□ -0.72
UBA3-206ENST00000464605 KRTAP19-1Q8IUB9 90 aa10.51□□□□□ -0.73
UBA3-206ENST00000464605 TP53AIP1Q9HCN2 124 aa10.49□□□□□ -0.73
UBA3-206ENST00000464605 KRTAP3-1Q9BYR8 98 aa10.48□□□□□ -0.73
UBA3-206ENST00000464605 ACYP1P07311 99 aa10.47□□□□□ -0.73
UBA3-206ENST00000464605 FAM240AA0A1B0GVK7 77 aa10.45□□□□□ -0.74
UBA3-206ENST00000464605 ATP5EP2Q5VTU8 51 aa10.35□□□□□ -0.75
UBA3-206ENST00000464605 C1orf64Q8NEQ6 169 aa10.35□□□□□ -0.75
UBA3-206ENST00000464605 A0A1B0GV90 55 aa10.33□□□□□ -0.76
UBA3-206ENST00000464605 CYP4F30PQ9H0H9 118 aa10.32□□□□□ -0.76
UBA3-206ENST00000464605 HIST1H4AP62805 103 aaKnown RBP10.28□□□□□ -0.76
UBA3-206ENST00000464605 KRTAP19-6Q3LI70 58 aa10.28□□□□□ -0.76
UBA3-206ENST00000464605 C5orf47Q569G3 176 aa10.28□□□□□ -0.76
UBA3-206ENST00000464605 MACF1Q9UPN3 7388 aaKnown RBP10.28□□□□□ -0.76
UBA3-206ENST00000464605 TRAV22A0A0B4J277 110 aa10.27□□□□□ -0.77
UBA3-206ENST00000464605 S4R3F8 94 aa10.27□□□□□ -0.77
UBA3-206ENST00000464605 LCA10Q71F78 164 aa10.25□□□□□ -0.77
UBA3-206ENST00000464605 LINC00643Q86TS7 51 aa10.24□□□□□ -0.77
UBA3-206ENST00000464605 A0A087WVE0 104 aa10.22□□□□□ -0.77
UBA3-206ENST00000464605 SYNE2Q8WXH0 6885 aaKnown RBP10.21□□□□□ -0.77
UBA3-206ENST00000464605 LOC101927531A0A1B0GV80 90 aa10.21□□□□□ -0.77
UBA3-206ENST00000464605 UQCRQO14949 82 aa10.19□□□□□ -0.78
UBA3-206ENST00000464605 CSAG1Q6PB30 78 aa10.18□□□□□ -0.78
UBA3-206ENST00000464605 KRTAP3-3Q9BYR6 98 aa10.17□□□□□ -0.78
UBA3-206ENST00000464605 H0Y9P7 68 aa10.14□□□□□ -0.79
UBA3-206ENST00000464605 ATOX1O00244 68 aa10.1□□□□□ -0.79
UBA3-206ENST00000464605 FAM236AA0A1B0GUQ0 79 aa10.06□□□□□ -0.8
UBA3-206ENST00000464605 FAM236BA0A1B0GV22 79 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms