RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 EYSQ5T1H1 3165 aa7.74□□□□□ -1.17
CHRNA4-202ENST00000463705 RPL37P61927 97 aaKnown RBP7.74□□□□□ -1.17
CHRNA4-202ENST00000463705 NOTCH2NLQ7Z3S9 236 aa7.73□□□□□ -1.17
CHRNA4-202ENST00000463705 SPTBN5Q9NRC6 3674 aaKnown RBP7.73□□□□□ -1.17
CHRNA4-202ENST00000463705 NIPBLQ6KC79 2804 aaeCLIP7.7□□□□□ -1.18
CHRNA4-202ENST00000463705 ASH1LQ9NR48 2969 aaKnown RBP7.68□□□□□ -1.18
CHRNA4-202ENST00000463705 ROMO1P60602 79 aa7.66□□□□□ -1.18
CHRNA4-202ENST00000463705 ZANQ9Y493 2812 aa7.66□□□□□ -1.18
CHRNA4-202ENST00000463705 M0QZ58 72 aa7.65□□□□□ -1.18
CHRNA4-202ENST00000463705 DMBT1Q9UGM3 2413 aaPredicted RBP7.65□□□□□ -1.18
CHRNA4-202ENST00000463705 DMXL1Q9Y485 3027 aa7.65□□□□□ -1.18
CHRNA4-202ENST00000463705 KRTAP13-2Q52LG2 175 aa7.65□□□□□ -1.19
CHRNA4-202ENST00000463705 PRAC1Q96KF2 57 aa7.64□□□□□ -1.19
CHRNA4-202ENST00000463705 REV3LO60673 3130 aa7.63□□□□□ -1.19
CHRNA4-202ENST00000463705 CELSR2Q9HCU4 2923 aa7.62□□□□□ -1.19
CHRNA4-202ENST00000463705 ADM2Q7Z4H4 148 aa7.62□□□□□ -1.19
CHRNA4-202ENST00000463705 HRNRQ86YZ3 2850 aaPredicted RBP7.61□□□□□ -1.19
CHRNA4-202ENST00000463705 CFAP47Q6ZTR5 3102 aa7.61□□□□□ -1.19
CHRNA4-202ENST00000463705 H3BS24 57 aa7.61□□□□□ -1.19
CHRNA4-202ENST00000463705 TENM4Q6N022 2769 aa7.58□□□□□ -1.2
CHRNA4-202ENST00000463705 WDFY3Q8IZQ1 3526 aa7.58□□□□□ -1.2
CHRNA4-202ENST00000463705 SPATA8Q6RVD6 105 aa7.56□□□□□ -1.2
CHRNA4-202ENST00000463705 DCHS2Q6V1P9 2916 aa7.54□□□□□ -1.2
CHRNA4-202ENST00000463705 A8MU10 97 aa7.53□□□□□ -1.2
CHRNA4-202ENST00000463705 PLAC4Q8WY50 150 aa7.53□□□□□ -1.2
CHRNA4-202ENST00000463705 LOC400499M0QZD8 3231 aa7.51□□□□□ -1.21
CHRNA4-202ENST00000463705 CRYBG3Q68DQ2 2970 aa7.5□□□□□ -1.21
CHRNA4-202ENST00000463705 A8MUU9 505 aa7.45□□□□□ -1.22
CHRNA4-202ENST00000463705 FBN2P35556 2912 aa7.44□□□□□ -1.22
CHRNA4-202ENST00000463705 C20orf166-AS1Q96NR2 134 aa7.43□□□□□ -1.22
CHRNA4-202ENST00000463705 DCHS1Q96JQ0 3298 aa7.43□□□□□ -1.22
CHRNA4-202ENST00000463705 NF1P21359 2839 aa7.43□□□□□ -1.22
CHRNA4-202ENST00000463705 ZFHX4Q86UP3 3567 aa7.39□□□□□ -1.23
CHRNA4-202ENST00000463705 A6NN06 94 aa7.37□□□□□ -1.23
CHRNA4-202ENST00000463705 KRTAP1-4P0C5Y4 121 aa7.34□□□□□ -1.23
CHRNA4-202ENST00000463705 CSMD1Q96PZ7 3565 aa7.32□□□□□ -1.24
CHRNA4-202ENST00000463705 MXRA5Q9NR99 2828 aa7.29□□□□□ -1.24
CHRNA4-202ENST00000463705 KRTAP25-1Q3LHN0 102 aa7.28□□□□□ -1.24
CHRNA4-202ENST00000463705 SMG1Q96Q15 3661 aaKnown RBP7.26□□□□□ -1.25
CHRNA4-202ENST00000463705 KRTAP16-1A8MUX0 517 aa7.25□□□□□ -1.25
CHRNA4-202ENST00000463705 ASPMQ8IZT6 3477 aa7.23□□□□□ -1.25
CHRNA4-202ENST00000463705 XP32Q5T750 250 aa7.22□□□□□ -1.25
CHRNA4-202ENST00000463705 RELNP78509 3460 aa7.18□□□□□ -1.26
CHRNA4-202ENST00000463705 CELSR1Q9NYQ6 3014 aa7.17□□□□□ -1.26
CHRNA4-202ENST00000463705 TPRXLQ17RH7 258 aa7.16□□□□□ -1.26
CHRNA4-202ENST00000463705 TENM3Q9P273 2699 aa7.16□□□□□ -1.26
CHRNA4-202ENST00000463705 DMDP11532 3685 aa7.15□□□□□ -1.26
CHRNA4-202ENST00000463705 TENM1Q9UKZ4 2725 aa7.13□□□□□ -1.27
CHRNA4-202ENST00000463705 TNP1P09430 55 aa7.13□□□□□ -1.27
CHRNA4-202ENST00000463705 SPENQ96T58 3664 aaKnown RBP7.09□□□□□ -1.27
CHRNA4-202ENST00000463705 PDZD2O15018 2839 aa7.08□□□□□ -1.28
CHRNA4-202ENST00000463705 TENM2Q9NT68 2774 aa7.08□□□□□ -1.28
CHRNA4-202ENST00000463705 LAMA5O15230 3695 aa7.05□□□□□ -1.28
CHRNA4-202ENST00000463705 SVEP1Q4LDE5 3571 aa7.03□□□□□ -1.28
CHRNA4-202ENST00000463705 KRTAP13-3Q3SY46 172 aa7.03□□□□□ -1.28
CHRNA4-202ENST00000463705 A0A1B0GVY2 172 aa7.02□□□□□ -1.29
CHRNA4-202ENST00000463705 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
CHRNA4-202ENST00000463705 NDUFAF8A1L188 74 aa6.99□□□□□ -1.29
CHRNA4-202ENST00000463705 H0YAA0 97 aa6.94□□□□□ -1.3
CHRNA4-202ENST00000463705 KRTAP10-8P60410 259 aa6.94□□□□□ -1.3
CHRNA4-202ENST00000463705 PKD1L1Q8TDX9 2849 aa6.92□□□□□ -1.3
CHRNA4-202ENST00000463705 TGP01266 2768 aa6.91□□□□□ -1.3
CHRNA4-202ENST00000463705 OTOGQ6ZRI0 2925 aa6.89□□□□□ -1.31
CHRNA4-202ENST00000463705 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
CHRNA4-202ENST00000463705 VWFP04275 2813 aa6.84□□□□□ -1.31
CHRNA4-202ENST00000463705 MUC3AQ02505 3323 aa6.83□□□□□ -1.32
CHRNA4-202ENST00000463705 FBN1P35555 2871 aaKnown RBP6.83□□□□□ -1.32
CHRNA4-202ENST00000463705 NBPF19A0A087WUL8 3843 aa6.82□□□□□ -1.32
CHRNA4-202ENST00000463705 KRTAP10-10P60014 251 aa6.79□□□□□ -1.32
CHRNA4-202ENST00000463705 ZFHX3Q15911 3703 aa6.79□□□□□ -1.32
CHRNA4-202ENST00000463705 P0C880 135 aa6.79□□□□□ -1.32
CHRNA4-202ENST00000463705 CUBNO60494 3623 aa6.78□□□□□ -1.32
CHRNA4-202ENST00000463705 PRO2289Q9P1D8 64 aa6.76□□□□□ -1.33
CHRNA4-202ENST00000463705 ANK3Q12955 4377 aaKnown RBP6.73□□□□□ -1.33
CHRNA4-202ENST00000463705 KRTAP3-1Q9BYR8 98 aa6.57□□□□□ -1.36
CHRNA4-202ENST00000463705 FBN3Q75N90 2809 aa6.56□□□□□ -1.36
CHRNA4-202ENST00000463705 BSNQ9UPA5 3926 aa6.55□□□□□ -1.36
CHRNA4-202ENST00000463705 CSMD2Q7Z408 3487 aa6.54□□□□□ -1.36
CHRNA4-202ENST00000463705 KRTAP12-2P59991 146 aa6.53□□□□□ -1.36
CHRNA4-202ENST00000463705 TRRAPQ9Y4A5 3859 aa6.49□□□□□ -1.37
CHRNA4-202ENST00000463705 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
CHRNA4-202ENST00000463705 KRTAP12-1P59990 96 aa6.46□□□□□ -1.38
CHRNA4-202ENST00000463705 SRRM2Q9UQ35 2752 aaKnown RBP6.46□□□□□ -1.38
CHRNA4-202ENST00000463705 MEGF8Q7Z7M0 2845 aa6.45□□□□□ -1.38
CHRNA4-202ENST00000463705 VPS13CQ709C8 3753 aa6.4□□□□□ -1.38
CHRNA4-202ENST00000463705 MT1HL1P0DM35 61 aa6.35□□□□□ -1.39
CHRNA4-202ENST00000463705 KRTAP10-6P60371 365 aaPredicted RBP6.35□□□□□ -1.39
CHRNA4-202ENST00000463705 COL7A1Q02388 2944 aa6.32□□□□□ -1.4
CHRNA4-202ENST00000463705 HUWE1Q7Z6Z7 4374 aaKnown RBP6.31□□□□□ -1.4
CHRNA4-202ENST00000463705 KRTAP10-4P60372 401 aaPredicted RBP6.29□□□□□ -1.4
CHRNA4-202ENST00000463705 ALMS1Q8TCU4 4167 aa6.18□□□□□ -1.42
CHRNA4-202ENST00000463705 KRTAP3-3Q9BYR6 98 aa6.17□□□□□ -1.42
CHRNA4-202ENST00000463705 KRTAP4-5Q9BYR2 181 aa6.15□□□□□ -1.42
CHRNA4-202ENST00000463705 KRTAP3-2Q9BYR7 98 aa6.15□□□□□ -1.42
CHRNA4-202ENST00000463705 AKAP9Q99996 3911 aa6.15□□□□□ -1.43
CHRNA4-202ENST00000463705 KRTAP15-1Q3LI76 137 aa6.1□□□□□ -1.43
CHRNA4-202ENST00000463705 DNAH9Q9NYC9 4486 aa6.03□□□□□ -1.44
CHRNA4-202ENST00000463705 CSMD3Q7Z407 3707 aa5.98□□□□□ -1.45
CHRNA4-202ENST00000463705 ZNF469Q96JG9 3925 aaPredicted RBP5.97□□□□□ -1.45
CHRNA4-202ENST00000463705 KRTAP10-12P60413 245 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms