RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 TACC2O95359 2948 aa7.06□□□□□ -1.28
NUP58-206ENST00000463407 CRYBG3Q68DQ2 2970 aa7.06□□□□□ -1.28
NUP58-206ENST00000463407 FLG2Q5D862 2391 aaPredicted RBP7.04□□□□□ -1.28
NUP58-206ENST00000463407 FLNCQ14315 2725 aa7.03□□□□□ -1.28
NUP58-206ENST00000463407 DMBT1Q9UGM3 2413 aaPredicted RBP7.02□□□□□ -1.28
NUP58-206ENST00000463407 STAB2Q8WWQ8 2551 aa7.02□□□□□ -1.29
NUP58-206ENST00000463407 ADGRG4Q8IZF6 3080 aa7.02□□□□□ -1.29
NUP58-206ENST00000463407 REV3LO60673 3130 aa6.99□□□□□ -1.29
NUP58-206ENST00000463407 A8MU10 97 aa6.98□□□□□ -1.29
NUP58-206ENST00000463407 FREM2Q5SZK8 3169 aa6.98□□□□□ -1.29
NUP58-206ENST00000463407 APCP25054 2843 aa6.98□□□□□ -1.29
NUP58-206ENST00000463407 KRTAP1-4P0C5Y4 121 aa6.97□□□□□ -1.29
NUP58-206ENST00000463407 XP32Q5T750 250 aa6.95□□□□□ -1.3
NUP58-206ENST00000463407 TENM4Q6N022 2769 aa6.93□□□□□ -1.3
NUP58-206ENST00000463407 CFAP47Q6ZTR5 3102 aa6.93□□□□□ -1.3
NUP58-206ENST00000463407 DMXL1Q9Y485 3027 aa6.92□□□□□ -1.3
NUP58-206ENST00000463407 A0A1B0GVY2 172 aa6.91□□□□□ -1.3
NUP58-206ENST00000463407 NBEAQ8NFP9 2946 aa6.89□□□□□ -1.31
NUP58-206ENST00000463407 A0A0A0MQY5 61 aa6.86□□□□□ -1.31
NUP58-206ENST00000463407 SPEGQ15772 3267 aa6.86□□□□□ -1.31
NUP58-206ENST00000463407 TPRXLQ17RH7 258 aa6.86□□□□□ -1.31
NUP58-206ENST00000463407 ZZEF1O43149 2961 aa6.83□□□□□ -1.32
NUP58-206ENST00000463407 HRNRQ86YZ3 2850 aaPredicted RBP6.82□□□□□ -1.32
NUP58-206ENST00000463407 TNP1P09430 55 aa6.81□□□□□ -1.32
NUP58-206ENST00000463407 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
NUP58-206ENST00000463407 A6NN06 94 aa6.78□□□□□ -1.32
NUP58-206ENST00000463407 ASH1LQ9NR48 2969 aaKnown RBP6.76□□□□□ -1.33
NUP58-206ENST00000463407 KRTAP10-8P60410 259 aa6.75□□□□□ -1.33
NUP58-206ENST00000463407 MYO15AQ9UKN7 3530 aa6.75□□□□□ -1.33
NUP58-206ENST00000463407 KRTAP10-10P60014 251 aa6.74□□□□□ -1.33
NUP58-206ENST00000463407 CELSR2Q9HCU4 2923 aa6.74□□□□□ -1.33
NUP58-206ENST00000463407 LOC400499M0QZD8 3231 aa6.73□□□□□ -1.33
NUP58-206ENST00000463407 KRTAP13-3Q3SY46 172 aa6.72□□□□□ -1.33
NUP58-206ENST00000463407 NIPBLQ6KC79 2804 aaeCLIP6.72□□□□□ -1.33
NUP58-206ENST00000463407 H3BS24 57 aa6.72□□□□□ -1.33
NUP58-206ENST00000463407 DCHS2Q6V1P9 2916 aa6.69□□□□□ -1.34
NUP58-206ENST00000463407 KRTAP16-1A8MUX0 517 aa6.69□□□□□ -1.34
NUP58-206ENST00000463407 ZANQ9Y493 2812 aa6.67□□□□□ -1.34
NUP58-206ENST00000463407 ASPMQ8IZT6 3477 aa6.63□□□□□ -1.35
NUP58-206ENST00000463407 TENM2Q9NT68 2774 aa6.62□□□□□ -1.35
NUP58-206ENST00000463407 NF1P21359 2839 aa6.57□□□□□ -1.36
NUP58-206ENST00000463407 C10orf95Q9H7T3 257 aa6.57□□□□□ -1.36
NUP58-206ENST00000463407 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
NUP58-206ENST00000463407 RELNP78509 3460 aa6.56□□□□□ -1.36
NUP58-206ENST00000463407 NBPF19A0A087WUL8 3843 aa6.55□□□□□ -1.36
NUP58-206ENST00000463407 FBN2P35556 2912 aa6.54□□□□□ -1.36
NUP58-206ENST00000463407 WDFY3Q8IZQ1 3526 aa6.53□□□□□ -1.36
NUP58-206ENST00000463407 H0YAA0 97 aa6.52□□□□□ -1.37
NUP58-206ENST00000463407 TENM1Q9UKZ4 2725 aa6.52□□□□□ -1.37
NUP58-206ENST00000463407 CELSR1Q9NYQ6 3014 aa6.49□□□□□ -1.37
NUP58-206ENST00000463407 PP632Q6XCG6 107 aa6.48□□□□□ -1.37
NUP58-206ENST00000463407 ZFHX4Q86UP3 3567 aa6.45□□□□□ -1.38
NUP58-206ENST00000463407 P0C880 135 aa6.44□□□□□ -1.38
NUP58-206ENST00000463407 PDZD2O15018 2839 aa6.44□□□□□ -1.38
NUP58-206ENST00000463407 LAMA5O15230 3695 aa6.44□□□□□ -1.38
NUP58-206ENST00000463407 NDUFAF8A1L188 74 aa6.43□□□□□ -1.38
NUP58-206ENST00000463407 ANK3Q12955 4377 aaKnown RBP6.43□□□□□ -1.38
NUP58-206ENST00000463407 DMDP11532 3685 aa6.41□□□□□ -1.38
NUP58-206ENST00000463407 MXRA5Q9NR99 2828 aa6.39□□□□□ -1.39
NUP58-206ENST00000463407 TENM3Q9P273 2699 aa6.39□□□□□ -1.39
NUP58-206ENST00000463407 DCHS1Q96JQ0 3298 aa6.33□□□□□ -1.4
NUP58-206ENST00000463407 CSMD1Q96PZ7 3565 aa6.28□□□□□ -1.4
NUP58-206ENST00000463407 PKD1L1Q8TDX9 2849 aa6.26□□□□□ -1.41
NUP58-206ENST00000463407 SMG1Q96Q15 3661 aaKnown RBP6.24□□□□□ -1.41
NUP58-206ENST00000463407 OTOGQ6ZRI0 2925 aa6.22□□□□□ -1.41
NUP58-206ENST00000463407 KRTAP12-2P59991 146 aa6.2□□□□□ -1.42
NUP58-206ENST00000463407 ZFHX3Q15911 3703 aa6.2□□□□□ -1.42
NUP58-206ENST00000463407 TGP01266 2768 aa6.18□□□□□ -1.42
NUP58-206ENST00000463407 VWFP04275 2813 aa6.16□□□□□ -1.42
NUP58-206ENST00000463407 KRTAP3-1Q9BYR8 98 aa6.14□□□□□ -1.43
NUP58-206ENST00000463407 FBN1P35555 2871 aaKnown RBP6.13□□□□□ -1.43
NUP58-206ENST00000463407 BSNQ9UPA5 3926 aa6.11□□□□□ -1.43
NUP58-206ENST00000463407 MT1HL1P0DM35 61 aa6.11□□□□□ -1.43
NUP58-206ENST00000463407 SPENQ96T58 3664 aaKnown RBP6.1□□□□□ -1.43
NUP58-206ENST00000463407 MUC3AQ02505 3323 aa6.1□□□□□ -1.43
NUP58-206ENST00000463407 HUWE1Q7Z6Z7 4374 aaKnown RBP6.08□□□□□ -1.44
NUP58-206ENST00000463407 KRTAP4-5Q9BYR2 181 aa6.07□□□□□ -1.44
NUP58-206ENST00000463407 KRTAP12-1P59990 96 aa6.06□□□□□ -1.44
NUP58-206ENST00000463407 KRTAP13-4Q3LI77 160 aa6.06□□□□□ -1.44
NUP58-206ENST00000463407 SVEP1Q4LDE5 3571 aa6.06□□□□□ -1.44
NUP58-206ENST00000463407 CSMD2Q7Z408 3487 aa6.04□□□□□ -1.44
NUP58-206ENST00000463407 ALMS1Q8TCU4 4167 aa6.01□□□□□ -1.45
NUP58-206ENST00000463407 TRRAPQ9Y4A5 3859 aa5.98□□□□□ -1.45
NUP58-206ENST00000463407 KRTAP10-4P60372 401 aaPredicted RBP5.91□□□□□ -1.46
NUP58-206ENST00000463407 KRTAP10-6P60371 365 aaPredicted RBP5.91□□□□□ -1.46
NUP58-206ENST00000463407 KRTAP15-1Q3LI76 137 aa5.88□□□□□ -1.47
NUP58-206ENST00000463407 FBN3Q75N90 2809 aa5.81□□□□□ -1.48
NUP58-206ENST00000463407 VPS13CQ709C8 3753 aa5.81□□□□□ -1.48
NUP58-206ENST00000463407 KRTAP3-3Q9BYR6 98 aa5.76□□□□□ -1.49
NUP58-206ENST00000463407 AKAP9Q99996 3911 aa5.76□□□□□ -1.49
NUP58-206ENST00000463407 DNAH9Q9NYC9 4486 aa5.74□□□□□ -1.49
NUP58-206ENST00000463407 CUBNO60494 3623 aa5.73□□□□□ -1.49
NUP58-206ENST00000463407 MEGF8Q7Z7M0 2845 aa5.72□□□□□ -1.49
NUP58-206ENST00000463407 KRTAP3-2Q9BYR7 98 aa5.72□□□□□ -1.49
NUP58-206ENST00000463407 KRTAP10-12P60413 245 aa5.7□□□□□ -1.5
NUP58-206ENST00000463407 SRRM2Q9UQ35 2752 aaKnown RBP5.69□□□□□ -1.5
NUP58-206ENST00000463407 CRCT1Q9UGL9 99 aa5.67□□□□□ -1.5
NUP58-206ENST00000463407 COL7A1Q02388 2944 aa5.64□□□□□ -1.51
NUP58-206ENST00000463407 ZNF469Q96JG9 3925 aaPredicted RBP5.58□□□□□ -1.52
NUP58-206ENST00000463407 DNAH1Q9P2D7 4330 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms