RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 H0YGG7 62 aa0.56□□□□□ -2.32
CCDC58-202ENST00000460810 K7EIM0 57 aa0.56□□□□□ -2.32
CCDC58-202ENST00000460810 M0R2T5 61 aa0.56□□□□□ -2.32
CCDC58-202ENST00000460810 NOP10Q9NPE3 64 aaKnown RBP0.56□□□□□ -2.32
CCDC58-202ENST00000460810 COL6A5A8TX70 2615 aa0.56□□□□□ -2.32
CCDC58-202ENST00000460810 TNRC18O15417 2968 aaPredicted RBP0.56□□□□□ -2.32
CCDC58-202ENST00000460810 LRP1Q07954 4544 aaKnown RBP0.56□□□□□ -2.32
CCDC58-202ENST00000460810 TENM4Q6N022 2769 aa0.55□□□□□ -2.32
CCDC58-202ENST00000460810 TENM2Q9NT68 2774 aa0.55□□□□□ -2.32
CCDC58-202ENST00000460810 MAP1BP46821 2468 aaKnown RBP0.55□□□□□ -2.32
CCDC58-202ENST00000460810 CCDC168Q8NDH2 2452 aa0.55□□□□□ -2.32
CCDC58-202ENST00000460810 DEFB135Q30KP9 77 aa0.55□□□□□ -2.32
CCDC58-202ENST00000460810 TMEM167AQ8TBQ9 72 aa0.55□□□□□ -2.32
CCDC58-202ENST00000460810 SPTBN4Q9H254 2564 aa0.55□□□□□ -2.32
CCDC58-202ENST00000460810 CEP250Q9BV73 2442 aa0.55□□□□□ -2.32
CCDC58-202ENST00000460810 RIF1Q5UIP0 2472 aaKnown RBP0.55□□□□□ -2.32
CCDC58-202ENST00000460810 BSNQ9UPA5 3926 aa0.54□□□□□ -2.32
CCDC58-202ENST00000460810 EPG5Q9HCE0 2579 aa0.54□□□□□ -2.32
CCDC58-202ENST00000460810 ZFYVE26Q68DK2 2539 aa0.54□□□□□ -2.32
CCDC58-202ENST00000460810 RPL39P5Q59GN2 51 aa0.53□□□□□ -2.32
CCDC58-202ENST00000460810 PDZD2O15018 2839 aa0.53□□□□□ -2.32
CCDC58-202ENST00000460810 FAT2Q9NYQ8 4349 aa0.53□□□□□ -2.32
CCDC58-202ENST00000460810 CRYBG3Q68DQ2 2970 aa0.53□□□□□ -2.33
CCDC58-202ENST00000460810 LYSTQ99698 3801 aa0.52□□□□□ -2.33
CCDC58-202ENST00000460810 FAM186AA6NE01 2351 aa0.52□□□□□ -2.33
CCDC58-202ENST00000460810 PRKDCP78527 4128 aaKnown RBP0.52□□□□□ -2.33
CCDC58-202ENST00000460810 DCHS2Q6V1P9 2916 aa0.52□□□□□ -2.33
CCDC58-202ENST00000460810 APC2O95996 2303 aa0.52□□□□□ -2.33
CCDC58-202ENST00000460810 NF1P21359 2839 aa0.51□□□□□ -2.33
CCDC58-202ENST00000460810 DEFB108AA8MXU0 73 aa0.51□□□□□ -2.33
CCDC58-202ENST00000460810 M0QZ58 72 aa0.51□□□□□ -2.33
CCDC58-202ENST00000460810 FLNCQ14315 2725 aa0.51□□□□□ -2.33
CCDC58-202ENST00000460810 HIVEP3Q5T1R4 2406 aa0.51□□□□□ -2.33
CCDC58-202ENST00000460810 USP24Q9UPU5 2620 aa0.51□□□□□ -2.33
CCDC58-202ENST00000460810 LRRK2Q5S007 2527 aa0.5□□□□□ -2.33
CCDC58-202ENST00000460810 HUWE1Q7Z6Z7 4374 aaKnown RBP0.5□□□□□ -2.33
CCDC58-202ENST00000460810 GCN1Q92616 2671 aaKnown RBP0.5□□□□□ -2.33
CCDC58-202ENST00000460810 UNC79Q9P2D8 2635 aa0.5□□□□□ -2.33
CCDC58-202ENST00000460810 COL12A1Q99715 3063 aa0.5□□□□□ -2.33
CCDC58-202ENST00000460810 ZZEF1O43149 2961 aa0.5□□□□□ -2.33
CCDC58-202ENST00000460810 USP9YO00507 2555 aaPredicted RBP0.5□□□□□ -2.33
CCDC58-202ENST00000460810 FRYQ5TBA9 3013 aa0.49□□□□□ -2.33
CCDC58-202ENST00000460810 NBEAL2Q6ZNJ1 2754 aa0.49□□□□□ -2.33
CCDC58-202ENST00000460810 DNAH11Q96DT5 4516 aa0.49□□□□□ -2.33
CCDC58-202ENST00000460810 PKD1L1Q8TDX9 2849 aa0.49□□□□□ -2.33
CCDC58-202ENST00000460810 SETXQ7Z333 2677 aaKnown RBP0.49□□□□□ -2.33
CCDC58-202ENST00000460810 TNXBP22105 4242 aa0.49□□□□□ -2.33
CCDC58-202ENST00000460810 C9orf92A6NGG3 77 aa0.48□□□□□ -2.33
CCDC58-202ENST00000460810 MTORP42345 2549 aa0.48□□□□□ -2.33
CCDC58-202ENST00000460810 PTPN13Q12923 2485 aa0.48□□□□□ -2.33
CCDC58-202ENST00000460810 ACANP16112 2415 aa0.48□□□□□ -2.33
CCDC58-202ENST00000460810 SPG11Q96JI7 2443 aa0.48□□□□□ -2.33
CCDC58-202ENST00000460810 KMT2AQ03164 3969 aa0.48□□□□□ -2.33
CCDC58-202ENST00000460810 UTP20O75691 2785 aaKnown RBP0.47□□□□□ -2.33
CCDC58-202ENST00000460810 TACC2O95359 2948 aa0.47□□□□□ -2.33
CCDC58-202ENST00000460810 ZFHX4Q86UP3 3567 aa0.47□□□□□ -2.33
CCDC58-202ENST00000460810 NCOR2Q9Y618 2525 aa0.47□□□□□ -2.33
CCDC58-202ENST00000460810 FAT4Q6V0I7 4981 aa0.47□□□□□ -2.33
CCDC58-202ENST00000460810 ITPR3Q14573 2671 aa0.47□□□□□ -2.33
CCDC58-202ENST00000460810 NBPF19A0A087WUL8 3843 aa0.47□□□□□ -2.33
CCDC58-202ENST00000460810 VPS13BQ7Z7G8 4022 aa0.47□□□□□ -2.33
CCDC58-202ENST00000460810 ANKHD1Q8IWZ3 2542 aaKnown RBP0.46□□□□□ -2.34
CCDC58-202ENST00000460810 AHNAKQ09666 5890 aaKnown RBP0.46□□□□□ -2.34
CCDC58-202ENST00000460810 DMXL1Q9Y485 3027 aa0.46□□□□□ -2.34
CCDC58-202ENST00000460810 PRM1P04553 51 aa0.46□□□□□ -2.34
CCDC58-202ENST00000460810 TNP1P09430 55 aa0.46□□□□□ -2.34
CCDC58-202ENST00000460810 SPENQ96T58 3664 aaKnown RBP0.46□□□□□ -2.34
CCDC58-202ENST00000460810 VPS13DQ5THJ4 4388 aa0.46□□□□□ -2.34
CCDC58-202ENST00000460810 CFAP54Q96N23 3096 aa0.46□□□□□ -2.34
CCDC58-202ENST00000460810 STAB1Q9NY15 2570 aa0.46□□□□□ -2.34
CCDC58-202ENST00000460810 NSD1Q96L73 2696 aaPredicted RBP0.45□□□□□ -2.34
CCDC58-202ENST00000460810 SACSQ9NZJ4 4579 aa0.45□□□□□ -2.34
CCDC58-202ENST00000460810 HIVEP1P15822 2718 aa0.45□□□□□ -2.34
CCDC58-202ENST00000460810 USP9XQ93008 2570 aaPredicted RBP0.45□□□□□ -2.34
CCDC58-202ENST00000460810 FLNBO75369 2602 aaKnown RBP0.44□□□□□ -2.34
CCDC58-202ENST00000460810 NBEAQ8NFP9 2946 aa0.44□□□□□ -2.34
CCDC58-202ENST00000460810 APELAP0DMC3 54 aa0.44□□□□□ -2.34
CCDC58-202ENST00000460810 SPRR2DP22532 72 aa0.44□□□□□ -2.34
CCDC58-202ENST00000460810 DEFB1P60022 68 aa0.44□□□□□ -2.34
CCDC58-202ENST00000460810 ANKRD11Q6UB99 2663 aaPredicted RBP0.43□□□□□ -2.34
CCDC58-202ENST00000460810 SPTBN5Q9NRC6 3674 aaKnown RBP0.43□□□□□ -2.34
CCDC58-202ENST00000460810 ZANQ9Y493 2812 aa0.43□□□□□ -2.34
CCDC58-202ENST00000460810 ATMQ13315 3056 aa0.43□□□□□ -2.34
CCDC58-202ENST00000460810 MYCBP2O75592 4640 aa0.43□□□□□ -2.34
CCDC58-202ENST00000460810 H3BNG1 76 aa0.43□□□□□ -2.34
CCDC58-202ENST00000460810 SPART-AS1P0CW21 52 aa0.43□□□□□ -2.34
CCDC58-202ENST00000460810 FASNP49327 2511 aaKnown RBP0.43□□□□□ -2.34
CCDC58-202ENST00000460810 CUBNO60494 3623 aa0.43□□□□□ -2.34
CCDC58-202ENST00000460810 KALRNO60229 2985 aa0.43□□□□□ -2.34
CCDC58-202ENST00000460810 ACACBO00763 2458 aa0.43□□□□□ -2.34
CCDC58-202ENST00000460810 RANBP2P49792 3224 aaKnown RBP0.43□□□□□ -2.34
CCDC58-202ENST00000460810 MYO18BQ8IUG5 2567 aa0.43□□□□□ -2.34
CCDC58-202ENST00000460810 DMXL2Q8TDJ6 3036 aa0.43□□□□□ -2.34
CCDC58-202ENST00000460810 CELSR3Q9NYQ7 3312 aa0.43□□□□□ -2.34
CCDC58-202ENST00000460810 CACNA1AO00555 2505 aa0.42□□□□□ -2.34
CCDC58-202ENST00000460810 TLN2Q9Y4G6 2542 aa0.42□□□□□ -2.34
CCDC58-202ENST00000460810 COL7A1Q02388 2944 aa0.42□□□□□ -2.34
CCDC58-202ENST00000460810 ITPR1Q14643 2758 aa0.42□□□□□ -2.34
CCDC58-202ENST00000460810 MAST4O15021 2626 aa0.42□□□□□ -2.34
CCDC58-202ENST00000460810 TEP1Q99973 2627 aaKnown RBP0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms