RNA–Protein interactions for RNA: ENST00000460207.1

RUNX1-209, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-209ENST00000460207 DEFB116Q30KQ4 102 aa8.08□□□□□ -1.12
RUNX1-209ENST00000460207 TRACP01848 142 aa8.07□□□□□ -1.12
RUNX1-209ENST00000460207 M0R143 59 aa8.06□□□□□ -1.12
RUNX1-209ENST00000460207 KRTAP19-1Q8IUB9 90 aa8.06□□□□□ -1.12
RUNX1-209ENST00000460207 MTURNQ8N3F0 131 aa8.06□□□□□ -1.12
RUNX1-209ENST00000460207 C8orf87E5RJ46 101 aa8.05□□□□□ -1.12
RUNX1-209ENST00000460207 COX6CP09669 75 aa8.05□□□□□ -1.12
RUNX1-209ENST00000460207 UBE2V1Q13404 147 aa8.05□□□□□ -1.12
RUNX1-209ENST00000460207 PSMB2P49721 201 aa8.04□□□□□ -1.12
RUNX1-209ENST00000460207 A0A1B0GV72 72 aa8.03□□□□□ -1.12
RUNX1-209ENST00000460207 A0A1B0GV90 55 aa8.03□□□□□ -1.12
RUNX1-209ENST00000460207 A0A1B0GVX0 72 aa8.03□□□□□ -1.12
RUNX1-209ENST00000460207 HSD52Q0P140 79 aa7.99□□□□□ -1.13
RUNX1-209ENST00000460207 ZCCHC13Q8WW36 166 aaKnown RBP7.99□□□□□ -1.13
RUNX1-209ENST00000460207 J3KT08 172 aa7.98□□□□□ -1.13
RUNX1-209ENST00000460207 SPINK7P58062 85 aa7.98□□□□□ -1.13
RUNX1-209ENST00000460207 RBM3P98179 157 aaKnown RBP7.98□□□□□ -1.13
RUNX1-209ENST00000460207 C21orf62-AS1Q17RA5 79 aa7.98□□□□□ -1.13
RUNX1-209ENST00000460207 DSCR8Q96T75 97 aa7.96□□□□□ -1.14
RUNX1-209ENST00000460207 K7ERJ3 54 aa7.95□□□□□ -1.14
RUNX1-209ENST00000460207 VPS25Q9BRG1 176 aa7.95□□□□□ -1.14
RUNX1-209ENST00000460207 LINC00846Q9NV44 126 aa7.95□□□□□ -1.14
RUNX1-209ENST00000460207 COL5A1-AS1Q5SY13 56 aa7.94□□□□□ -1.14
RUNX1-209ENST00000460207 Q8N9P0 234 aaPredicted RBP7.94□□□□□ -1.14
RUNX1-209ENST00000460207 NDUFB1O75438 58 aa7.91□□□□□ -1.14
RUNX1-209ENST00000460207 Q6ZQT0 140 aa7.91□□□□□ -1.14
RUNX1-209ENST00000460207 C9JAW5 83 aa7.9□□□□□ -1.14
RUNX1-209ENST00000460207 SCGB1C2P0DMR2 95 aa7.9□□□□□ -1.14
RUNX1-209ENST00000460207 A8MWP4 228 aa7.89□□□□□ -1.15
RUNX1-209ENST00000460207 KRTAP19-6Q3LI70 58 aa7.89□□□□□ -1.15
RUNX1-209ENST00000460207 BAALC-AS2P0C853 105 aa7.88□□□□□ -1.15
RUNX1-209ENST00000460207 UQCR10Q9UDW1 63 aa7.88□□□□□ -1.15
RUNX1-209ENST00000460207 MACF1Q9UPN3 7388 aaKnown RBP7.87□□□□□ -1.15
RUNX1-209ENST00000460207 A0A1B0GW54 56 aa7.86□□□□□ -1.15
RUNX1-209ENST00000460207 WFDC13Q8IUB5 93 aa7.84□□□□□ -1.15
RUNX1-209ENST00000460207 LYRM7Q5U5X0 104 aa7.83□□□□□ -1.16
RUNX1-209ENST00000460207 C8orf17Q9NRJ1 99 aa7.83□□□□□ -1.16
RUNX1-209ENST00000460207 JMJD7-PLA2G4BH0Y9G9 81 aa7.8□□□□□ -1.16
RUNX1-209ENST00000460207 PCP4P48539 62 aa7.8□□□□□ -1.16
RUNX1-209ENST00000460207 IGKV3D-7A0A0C4DH55 119 aa7.79□□□□□ -1.16
RUNX1-209ENST00000460207 PDE6GP18545 87 aa7.79□□□□□ -1.16
RUNX1-209ENST00000460207 LOC110117498A0A087WWA1 95 aa7.78□□□□□ -1.16
RUNX1-209ENST00000460207 Q6ZVQ6 151 aa7.78□□□□□ -1.16
RUNX1-209ENST00000460207 SYNE2Q8WXH0 6885 aaKnown RBP7.77□□□□□ -1.17
RUNX1-209ENST00000460207 PRR15Q8IV56 129 aa7.75□□□□□ -1.17
RUNX1-209ENST00000460207 ATXN8Q156A1 80 aa7.73□□□□□ -1.17
RUNX1-209ENST00000460207 BATFQ16520 125 aa7.73□□□□□ -1.17
RUNX1-209ENST00000460207 H1FX-AS1Q4G0G2 97 aa7.73□□□□□ -1.17
RUNX1-209ENST00000460207 K7ERU9 68 aa7.71□□□□□ -1.18
RUNX1-209ENST00000460207 NREPQ16612 68 aa7.7□□□□□ -1.18
RUNX1-209ENST00000460207 TMEM254Q8TBM7 123 aa7.7□□□□□ -1.18
RUNX1-209ENST00000460207 MRPL34Q9BQ48 92 aaKnown RBP7.7□□□□□ -1.18
RUNX1-209ENST00000460207 KRTAP6-3Q3LI67 103 aa7.67□□□□□ -1.18
RUNX1-209ENST00000460207 MMP24-AS1A0A0U1RRL7 71 aa7.66□□□□□ -1.18
RUNX1-209ENST00000460207 GTF2H5Q6ZYL4 71 aa7.66□□□□□ -1.18
RUNX1-209ENST00000460207 C14orf132Q9NPU4 83 aa7.66□□□□□ -1.18
RUNX1-209ENST00000460207 hDV103S1A0JD37 113 aa7.64□□□□□ -1.19
RUNX1-209ENST00000460207 NAA38Q9BRA0 125 aaKnown RBP7.61□□□□□ -1.19
RUNX1-209ENST00000460207 NDUFS5O43920 106 aa7.6□□□□□ -1.19
RUNX1-209ENST00000460207 TAX1BP3O14907 124 aa7.58□□□□□ -1.2
RUNX1-209ENST00000460207 SCGB1A1P11684 91 aa7.58□□□□□ -1.2
RUNX1-209ENST00000460207 IGKV2D-30A0A075B6S6 120 aa7.57□□□□□ -1.2
RUNX1-209ENST00000460207 K7EQZ3 153 aa7.57□□□□□ -1.2
RUNX1-209ENST00000460207 IGKV2-30P06310 120 aa7.57□□□□□ -1.2
RUNX1-209ENST00000460207 C7orf65Q6ZTY9 151 aa7.57□□□□□ -1.2
RUNX1-209ENST00000460207 J3QR89 54 aa7.56□□□□□ -1.2
RUNX1-209ENST00000460207 Q5W150 140 aa7.56□□□□□ -1.2
RUNX1-209ENST00000460207 C9orf118A6NHY6 69 aa7.55□□□□□ -1.2
RUNX1-209ENST00000460207 BPY2O14599 106 aa7.52□□□□□ -1.21
RUNX1-209ENST00000460207 K7EP34 96 aa7.51□□□□□ -1.21
RUNX1-209ENST00000460207 H3BT86 120 aa7.48□□□□□ -1.21
RUNX1-209ENST00000460207 C4orf26Q17RF5 130 aa7.48□□□□□ -1.21
RUNX1-209ENST00000460207 F8W1H4 67 aa7.47□□□□□ -1.21
RUNX1-209ENST00000460207 A0A1W2PPM0 123 aa7.46□□□□□ -1.22
RUNX1-209ENST00000460207 CASC2Q6XLA1 102 aa7.46□□□□□ -1.22
RUNX1-209ENST00000460207 CXCL6P80162 114 aa7.45□□□□□ -1.22
RUNX1-209ENST00000460207 HCG22E2RYF7 251 aa7.44□□□□□ -1.22
RUNX1-209ENST00000460207 SPCS1Q9Y6A9 102 aa7.44□□□□□ -1.22
RUNX1-209ENST00000460207 A6NN06 94 aa7.41□□□□□ -1.22
RUNX1-209ENST00000460207 C5orf47Q569G3 176 aa7.41□□□□□ -1.22
RUNX1-209ENST00000460207 FAM236AA0A1B0GUQ0 79 aa7.4□□□□□ -1.22
RUNX1-209ENST00000460207 FAM236BA0A1B0GV22 79 aa7.4□□□□□ -1.22
RUNX1-209ENST00000460207 Q8N9L7 120 aa7.4□□□□□ -1.22
RUNX1-209ENST00000460207 MT1BP07438 61 aa7.39□□□□□ -1.23
RUNX1-209ENST00000460207 CSAG1Q6PB30 78 aa7.39□□□□□ -1.23
RUNX1-209ENST00000460207 SPRR2GQ9BYE4 73 aa7.39□□□□□ -1.23
RUNX1-209ENST00000460207 KRTAP19-8Q3LI54 63 aa7.38□□□□□ -1.23
RUNX1-209ENST00000460207 Q5VV11 94 aa7.38□□□□□ -1.23
RUNX1-209ENST00000460207 KRTAP3-1Q9BYR8 98 aa7.38□□□□□ -1.23
RUNX1-209ENST00000460207 NEBP20929 6669 aa7.35□□□□□ -1.23
RUNX1-209ENST00000460207 S4R3F8 94 aa7.35□□□□□ -1.23
RUNX1-209ENST00000460207 SVIPQ8NHG7 77 aa7.34□□□□□ -1.23
RUNX1-209ENST00000460207 C1orf64Q8NEQ6 169 aa7.33□□□□□ -1.24
RUNX1-209ENST00000460207 LCA10Q71F78 164 aa7.3□□□□□ -1.24
RUNX1-209ENST00000460207 MUC12Q9UKN1 5478 aa7.29□□□□□ -1.24
RUNX1-209ENST00000460207 KRTAP10-5P60370 271 aa7.29□□□□□ -1.24
RUNX1-209ENST00000460207 UBL5Q9BZL1 73 aa7.28□□□□□ -1.24
RUNX1-209ENST00000460207 KLKP1Q107X0 134 aa7.26□□□□□ -1.25
RUNX1-209ENST00000460207 TP53AIP1Q9HCN2 124 aa7.25□□□□□ -1.25
RUNX1-209ENST00000460207 SMCPP49901 116 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms