RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 CSMD3Q7Z407 3707 aa1.07□□□□□ -2.24
CKAP2-204ENST00000459902 SACSQ9NZJ4 4579 aa1.07□□□□□ -2.24
CKAP2-204ENST00000459902 BSNQ9UPA5 3926 aa1.07□□□□□ -2.24
CKAP2-204ENST00000459902 CRYBG3Q68DQ2 2970 aa1.06□□□□□ -2.24
CKAP2-204ENST00000459902 A0A096LNI7 61 aa1.06□□□□□ -2.24
CKAP2-204ENST00000459902 ZFHX4Q86UP3 3567 aa1.06□□□□□ -2.24
CKAP2-204ENST00000459902 TENM3Q9P273 2699 aa1.06□□□□□ -2.24
CKAP2-204ENST00000459902 FRYQ5TBA9 3013 aa1.06□□□□□ -2.24
CKAP2-204ENST00000459902 PKD1L2Q7Z442 2459 aa1.06□□□□□ -2.24
CKAP2-204ENST00000459902 TTC28Q96AY4 2481 aa1.06□□□□□ -2.24
CKAP2-204ENST00000459902 SPENQ96T58 3664 aaKnown RBP1.05□□□□□ -2.24
CKAP2-204ENST00000459902 AKAP9Q99996 3911 aa1.05□□□□□ -2.24
CKAP2-204ENST00000459902 RANBP2P49792 3224 aaKnown RBP1.05□□□□□ -2.24
CKAP2-204ENST00000459902 M0R2T5 61 aa1.05□□□□□ -2.24
CKAP2-204ENST00000459902 SPART-AS1P0CW21 52 aa1.05□□□□□ -2.24
CKAP2-204ENST00000459902 DEFB108BQ8NET1 73 aa1.05□□□□□ -2.24
CKAP2-204ENST00000459902 PDZD2O15018 2839 aa1.05□□□□□ -2.24
CKAP2-204ENST00000459902 TENM4Q6N022 2769 aa1.04□□□□□ -2.24
CKAP2-204ENST00000459902 VPS13BQ7Z7G8 4022 aa1.04□□□□□ -2.24
CKAP2-204ENST00000459902 PRKDCP78527 4128 aaKnown RBP1.04□□□□□ -2.24
CKAP2-204ENST00000459902 CCDC168Q8NDH2 2452 aa1.04□□□□□ -2.24
CKAP2-204ENST00000459902 POLQO75417 2590 aa1.03□□□□□ -2.24
CKAP2-204ENST00000459902 KMT2AQ03164 3969 aa1.03□□□□□ -2.24
CKAP2-204ENST00000459902 WDR87Q6ZQQ6 2873 aa1.03□□□□□ -2.24
CKAP2-204ENST00000459902 C9orf92A6NGG3 77 aa1.02□□□□□ -2.25
CKAP2-204ENST00000459902 NAV2Q8IVL1 2488 aa1.02□□□□□ -2.25
CKAP2-204ENST00000459902 ANK2Q01484 3957 aa1.02□□□□□ -2.25
CKAP2-204ENST00000459902 DCHS2Q6V1P9 2916 aa1.02□□□□□ -2.25
CKAP2-204ENST00000459902 DNAH8Q96JB1 4490 aa1.01□□□□□ -2.25
CKAP2-204ENST00000459902 KRTAP2-3P0C7H8 128 aa1.01□□□□□ -2.25
CKAP2-204ENST00000459902 DEFB110Q30KQ9 67 aa1.01□□□□□ -2.25
CKAP2-204ENST00000459902 KRTAP2-4Q9BYR9 128 aa1.01□□□□□ -2.25
CKAP2-204ENST00000459902 KRTAP2-1Q9BYU5 128 aa1.01□□□□□ -2.25
CKAP2-204ENST00000459902 DEFB124Q8NES8 71 aa1□□□□□ -2.25
CKAP2-204ENST00000459902 RELNP78509 3460 aa1□□□□□ -2.25
CKAP2-204ENST00000459902 CFAP54Q96N23 3096 aa1□□□□□ -2.25
CKAP2-204ENST00000459902 SMR3AQ99954 134 aa0.99□□□□□ -2.25
CKAP2-204ENST00000459902 DYNC2H1Q8NCM8 4307 aaKnown RBP0.99□□□□□ -2.25
CKAP2-204ENST00000459902 NCOR1O75376 2440 aa0.98□□□□□ -2.25
CKAP2-204ENST00000459902 APC2O95996 2303 aa0.98□□□□□ -2.25
CKAP2-204ENST00000459902 ATRQ13535 2644 aa0.98□□□□□ -2.25
CKAP2-204ENST00000459902 HECTD1Q9ULT8 2610 aa0.98□□□□□ -2.25
CKAP2-204ENST00000459902 H3BNG1 76 aa0.98□□□□□ -2.25
CKAP2-204ENST00000459902 FAT2Q9NYQ8 4349 aa0.98□□□□□ -2.25
CKAP2-204ENST00000459902 DMBT1Q9UGM3 2413 aaPredicted RBP0.98□□□□□ -2.25
CKAP2-204ENST00000459902 FRYLO94915 3013 aa0.97□□□□□ -2.25
CKAP2-204ENST00000459902 PKHD1L1Q86WI1 4243 aa0.97□□□□□ -2.25
CKAP2-204ENST00000459902 ITPR3Q14573 2671 aa0.97□□□□□ -2.25
CKAP2-204ENST00000459902 CREBBPQ92793 2442 aa0.97□□□□□ -2.25
CKAP2-204ENST00000459902 DNAH7Q8WXX0 4024 aa0.96□□□□□ -2.26
CKAP2-204ENST00000459902 C5orf42Q9H799 3197 aa0.96□□□□□ -2.26
CKAP2-204ENST00000459902 CEP350Q5VT06 3117 aa0.96□□□□□ -2.26
CKAP2-204ENST00000459902 NF1P21359 2839 aa0.96□□□□□ -2.26
CKAP2-204ENST00000459902 NBEAQ8NFP9 2946 aa0.95□□□□□ -2.26
CKAP2-204ENST00000459902 DNAH3Q8TD57 4116 aa0.95□□□□□ -2.26
CKAP2-204ENST00000459902 A0A096LPF7 62 aa0.95□□□□□ -2.26
CKAP2-204ENST00000459902 SETD2Q9BYW2 2564 aaPredicted RBP0.95□□□□□ -2.26
CKAP2-204ENST00000459902 DNAH2Q9P225 4427 aa0.94□□□□□ -2.26
CKAP2-204ENST00000459902 PRUNE2Q8WUY3 3088 aa0.94□□□□□ -2.26
CKAP2-204ENST00000459902 Q9Y3F1 56 aa0.94□□□□□ -2.26
CKAP2-204ENST00000459902 COL7A1Q02388 2944 aa0.94□□□□□ -2.26
CKAP2-204ENST00000459902 PIEZO1Q92508 2521 aa0.93□□□□□ -2.26
CKAP2-204ENST00000459902 COL12A1Q99715 3063 aa0.93□□□□□ -2.26
CKAP2-204ENST00000459902 NBASA2RRP1 2371 aa0.93□□□□□ -2.26
CKAP2-204ENST00000459902 HECTD4Q9Y4D8 3996 aa0.93□□□□□ -2.26
CKAP2-204ENST00000459902 SMG1Q96Q15 3661 aaKnown RBP0.93□□□□□ -2.26
CKAP2-204ENST00000459902 ANK3Q12955 4377 aaKnown RBP0.92□□□□□ -2.26
CKAP2-204ENST00000459902 APCP25054 2843 aa0.92□□□□□ -2.26
CKAP2-204ENST00000459902 USP24Q9UPU5 2620 aa0.92□□□□□ -2.26
CKAP2-204ENST00000459902 BOD1L1Q8NFC6 3051 aa0.92□□□□□ -2.26
CKAP2-204ENST00000459902 FLGP20930 4061 aaPredicted RBP0.91□□□□□ -2.26
CKAP2-204ENST00000459902 ATMQ13315 3056 aa0.91□□□□□ -2.26
CKAP2-204ENST00000459902 DMXL1Q9Y485 3027 aa0.91□□□□□ -2.26
CKAP2-204ENST00000459902 PRM1P04553 51 aa0.91□□□□□ -2.26
CKAP2-204ENST00000459902 LINC01556Q5JQF7 62 aa0.91□□□□□ -2.26
CKAP2-204ENST00000459902 KRTAP19-3Q7Z4W3 81 aa0.91□□□□□ -2.26
CKAP2-204ENST00000459902 U3KQA8 63 aa0.91□□□□□ -2.26
CKAP2-204ENST00000459902 LRBAP50851 2863 aa0.91□□□□□ -2.26
CKAP2-204ENST00000459902 CELSR3Q9NYQ7 3312 aa0.91□□□□□ -2.26
CKAP2-204ENST00000459902 ZZEF1O43149 2961 aa0.91□□□□□ -2.26
CKAP2-204ENST00000459902 TNXBP22105 4242 aa0.91□□□□□ -2.26
CKAP2-204ENST00000459902 SZT2Q5T011 3432 aa0.9□□□□□ -2.26
CKAP2-204ENST00000459902 USP9YO00507 2555 aaPredicted RBP0.9□□□□□ -2.27
CKAP2-204ENST00000459902 FRAS1Q86XX4 4008 aa0.9□□□□□ -2.27
CKAP2-204ENST00000459902 SPTBN5Q9NRC6 3674 aaKnown RBP0.9□□□□□ -2.27
CKAP2-204ENST00000459902 TACC2O95359 2948 aa0.9□□□□□ -2.27
CKAP2-204ENST00000459902 DNAH12Q6ZR08 3092 aa0.9□□□□□ -2.27
CKAP2-204ENST00000459902 MKI67P46013 3256 aaKnown RBP0.9□□□□□ -2.27
CKAP2-204ENST00000459902 HSPG2P98160 4391 aa0.89□□□□□ -2.27
CKAP2-204ENST00000459902 FLNCQ14315 2725 aa0.89□□□□□ -2.27
CKAP2-204ENST00000459902 DNAH10Q8IVF4 4471 aa0.89□□□□□ -2.27
CKAP2-204ENST00000459902 GCN1Q92616 2671 aaKnown RBP0.89□□□□□ -2.27
CKAP2-204ENST00000459902 MAP1BP46821 2468 aaKnown RBP0.89□□□□□ -2.27
CKAP2-204ENST00000459902 DEFB133Q30KQ1 61 aa0.89□□□□□ -2.27
CKAP2-204ENST00000459902 KRTAP8-1Q8IUC2 63 aa0.89□□□□□ -2.27
CKAP2-204ENST00000459902 DMDP11532 3685 aa0.89□□□□□ -2.27
CKAP2-204ENST00000459902 TRIOO75962 3097 aa0.89□□□□□ -2.27
CKAP2-204ENST00000459902 DMXL2Q8TDJ6 3036 aa0.89□□□□□ -2.27
CKAP2-204ENST00000459902 DNAH6Q9C0G6 4158 aa0.88□□□□□ -2.27
CKAP2-204ENST00000459902 PKD1L1Q8TDX9 2849 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms