RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 SIGMAR1Q99720 223 aa5.87□□□□□ -1.47
NEDD9-205ENST00000459670 IMUPQ9GZP8 106 aa5.87□□□□□ -1.47
NEDD9-205ENST00000459670 K7EQZ3 153 aa5.86□□□□□ -1.47
NEDD9-205ENST00000459670 BPY2O14599 106 aa5.86□□□□□ -1.47
NEDD9-205ENST00000459670 DEFB116Q30KQ4 102 aa5.86□□□□□ -1.47
NEDD9-205ENST00000459670 HERC1Q15751 4861 aa5.86□□□□□ -1.47
NEDD9-205ENST00000459670 A8MWP4 228 aa5.85□□□□□ -1.47
NEDD9-205ENST00000459670 J3KT08 172 aa5.85□□□□□ -1.47
NEDD9-205ENST00000459670 Q8N9L7 120 aa5.85□□□□□ -1.47
NEDD9-205ENST00000459670 HIST1H4AP62805 103 aaKnown RBP5.84□□□□□ -1.47
NEDD9-205ENST00000459670 PRR15Q8IV56 129 aa5.84□□□□□ -1.47
NEDD9-205ENST00000459670 A0A087WVE0 104 aa5.82□□□□□ -1.48
NEDD9-205ENST00000459670 A0A1B0GVX0 72 aa5.82□□□□□ -1.48
NEDD9-205ENST00000459670 MMP24-AS1A0A0U1RRL7 71 aa5.81□□□□□ -1.48
NEDD9-205ENST00000459670 NOTCH2NLQ7Z3S9 236 aa5.8□□□□□ -1.48
NEDD9-205ENST00000459670 KRTAP16-1A8MUX0 517 aa5.79□□□□□ -1.48
NEDD9-205ENST00000459670 RETNLBQ9BQ08 111 aa5.79□□□□□ -1.48
NEDD9-205ENST00000459670 FP248Q71RG6 208 aaPredicted RBP5.77□□□□□ -1.49
NEDD9-205ENST00000459670 C8orf17Q9NRJ1 99 aa5.77□□□□□ -1.49
NEDD9-205ENST00000459670 C8orf87E5RJ46 101 aa5.75□□□□□ -1.49
NEDD9-205ENST00000459670 HCG22E2RYF7 251 aa5.74□□□□□ -1.49
NEDD9-205ENST00000459670 LPAP08519 4548 aa5.73□□□□□ -1.49
NEDD9-205ENST00000459670 HMCN2Q8NDA2 5059 aa5.73□□□□□ -1.49
NEDD9-205ENST00000459670 IGHV6-1A0A0B4J1U7 121 aa5.73□□□□□ -1.49
NEDD9-205ENST00000459670 FAM236AA0A1B0GUQ0 79 aa5.73□□□□□ -1.49
NEDD9-205ENST00000459670 FAM236BA0A1B0GV22 79 aa5.73□□□□□ -1.49
NEDD9-205ENST00000459670 NDUFB1O75438 58 aa5.73□□□□□ -1.49
NEDD9-205ENST00000459670 SCGB1A1P11684 91 aa5.73□□□□□ -1.49
NEDD9-205ENST00000459670 KRTAP13-3Q3SY46 172 aa5.73□□□□□ -1.49
NEDD9-205ENST00000459670 TMEM254Q8TBM7 123 aa5.72□□□□□ -1.49
NEDD9-205ENST00000459670 hDV103S1A0JD37 113 aa5.7□□□□□ -1.5
NEDD9-205ENST00000459670 LRP2P98164 4655 aa5.7□□□□□ -1.5
NEDD9-205ENST00000459670 Q8N9P0 234 aaPredicted RBP5.7□□□□□ -1.5
NEDD9-205ENST00000459670 OCR1Q9BZK8 76 aa5.7□□□□□ -1.5
NEDD9-205ENST00000459670 LOC100996750A0A140TA64 210 aa5.69□□□□□ -1.5
NEDD9-205ENST00000459670 TPRXLQ17RH7 258 aa5.69□□□□□ -1.5
NEDD9-205ENST00000459670 CASC2Q6XLA1 102 aa5.69□□□□□ -1.5
NEDD9-205ENST00000459670 WFDC13Q8IUB5 93 aa5.69□□□□□ -1.5
NEDD9-205ENST00000459670 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
NEDD9-205ENST00000459670 MUC17Q685J3 4493 aa5.69□□□□□ -1.5
NEDD9-205ENST00000459670 LINC00313P59037 77 aa5.68□□□□□ -1.5
NEDD9-205ENST00000459670 C20orf166-AS1Q96NR2 134 aa5.68□□□□□ -1.5
NEDD9-205ENST00000459670 MRPL34Q9BQ48 92 aaKnown RBP5.68□□□□□ -1.5
NEDD9-205ENST00000459670 IGLV7-46A0A075B6I9 117 aa5.67□□□□□ -1.5
NEDD9-205ENST00000459670 A8MUU9 505 aa5.67□□□□□ -1.5
NEDD9-205ENST00000459670 ATOX1O00244 68 aa5.65□□□□□ -1.5
NEDD9-205ENST00000459670 C9orf92A6NGG3 77 aa5.64□□□□□ -1.51
NEDD9-205ENST00000459670 XP32Q5T750 250 aa5.64□□□□□ -1.51
NEDD9-205ENST00000459670 Q75L30 129 aa5.62□□□□□ -1.51
NEDD9-205ENST00000459670 TRAV7A0A075B6U4 112 aa5.6□□□□□ -1.51
NEDD9-205ENST00000459670 PRR4Q16378 134 aa5.6□□□□□ -1.51
NEDD9-205ENST00000459670 Q5W150 140 aa5.6□□□□□ -1.51
NEDD9-205ENST00000459670 RPL37P61927 97 aaKnown RBP5.59□□□□□ -1.51
NEDD9-205ENST00000459670 SMIM20Q8N5G0 67 aa5.59□□□□□ -1.51
NEDD9-205ENST00000459670 SERP2Q8N6R1 65 aa5.59□□□□□ -1.51
NEDD9-205ENST00000459670 TP53AIP1Q9HCN2 124 aa5.58□□□□□ -1.52
NEDD9-205ENST00000459670 UQCRQO14949 82 aa5.57□□□□□ -1.52
NEDD9-205ENST00000459670 ZCCHC13Q8WW36 166 aaKnown RBP5.56□□□□□ -1.52
NEDD9-205ENST00000459670 COX7CP15954 63 aa5.55□□□□□ -1.52
NEDD9-205ENST00000459670 TRAV22A0A0B4J277 110 aa5.54□□□□□ -1.52
NEDD9-205ENST00000459670 ANAPC13Q9BS18 74 aa5.54□□□□□ -1.52
NEDD9-205ENST00000459670 A0A0U1RQV1 116 aa5.52□□□□□ -1.53
NEDD9-205ENST00000459670 NDUFS5O43920 106 aa5.51□□□□□ -1.53
NEDD9-205ENST00000459670 KLKP1Q107X0 134 aa5.51□□□□□ -1.53
NEDD9-205ENST00000459670 H0Y9P7 68 aa5.5□□□□□ -1.53
NEDD9-205ENST00000459670 CCDC179H3BU77 68 aa5.5□□□□□ -1.53
NEDD9-205ENST00000459670 C5orf47Q569G3 176 aa5.5□□□□□ -1.53
NEDD9-205ENST00000459670 CYSTM1Q9H1C7 97 aa5.5□□□□□ -1.53
NEDD9-205ENST00000459670 H3BPC8 53 aa5.48□□□□□ -1.53
NEDD9-205ENST00000459670 IGKV2-30P06310 120 aa5.48□□□□□ -1.53
NEDD9-205ENST00000459670 PCP4P48539 62 aa5.46□□□□□ -1.54
NEDD9-205ENST00000459670 C20orf197Q8N268 126 aa5.46□□□□□ -1.54
NEDD9-205ENST00000459670 LOC101927531A0A1B0GV80 90 aa5.44□□□□□ -1.54
NEDD9-205ENST00000459670 PCOTHQ58A44 107 aa5.44□□□□□ -1.54
NEDD9-205ENST00000459670 LINC00208Q96KT6 92 aa5.44□□□□□ -1.54
NEDD9-205ENST00000459670 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
NEDD9-205ENST00000459670 MP68P56378 58 aa5.43□□□□□ -1.54
NEDD9-205ENST00000459670 C1orf64Q8NEQ6 169 aa5.43□□□□□ -1.54
NEDD9-205ENST00000459670 CYP4F30PQ9H0H9 118 aa5.43□□□□□ -1.54
NEDD9-205ENST00000459670 SNURFQ9Y675 71 aa5.43□□□□□ -1.54
NEDD9-205ENST00000459670 H7BZZ5 65 aa5.42□□□□□ -1.54
NEDD9-205ENST00000459670 ATP11AUNQ6ZP68 121 aa5.41□□□□□ -1.54
NEDD9-205ENST00000459670 MPLKIPQ8TAP9 179 aa5.41□□□□□ -1.54
NEDD9-205ENST00000459670 HRES1P13985 223 aa5.4□□□□□ -1.54
NEDD9-205ENST00000459670 C7orf65Q6ZTY9 151 aa5.4□□□□□ -1.54
NEDD9-205ENST00000459670 SEC61BP60468 96 aaKnown RBP5.39□□□□□ -1.55
NEDD9-205ENST00000459670 SPINK7P58062 85 aa5.38□□□□□ -1.55
NEDD9-205ENST00000459670 KRTAP19-2Q3LHN2 52 aa5.38□□□□□ -1.55
NEDD9-205ENST00000459670 IGKV2D-30A0A075B6S6 120 aa5.37□□□□□ -1.55
NEDD9-205ENST00000459670 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
NEDD9-205ENST00000459670 NDUFC1O43677 76 aa5.35□□□□□ -1.55
NEDD9-205ENST00000459670 MUC2Q02817 5179 aa5.35□□□□□ -1.55
NEDD9-205ENST00000459670 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
NEDD9-205ENST00000459670 SPANXA2-OT1Q8N9U9 137 aa5.33□□□□□ -1.56
NEDD9-205ENST00000459670 KRTAP3-1Q9BYR8 98 aa5.32□□□□□ -1.56
NEDD9-205ENST00000459670 FLGP20930 4061 aaPredicted RBP5.29□□□□□ -1.56
NEDD9-205ENST00000459670 TMEM258P61165 79 aa5.29□□□□□ -1.56
NEDD9-205ENST00000459670 DMAC1Q96GE9 116 aa5.28□□□□□ -1.56
NEDD9-205ENST00000459670 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
NEDD9-205ENST00000459670 C4orf26Q17RF5 130 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms