RNA–Protein interactions for RNA: ENST00000458420.7

CLSTN2-201, Transcript of calsyntenin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLSTN2, Length 14,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN2-201ENST00000458420 ITPR1Q14643 2758 aa4.05□□□□□ -1.76
CLSTN2-201ENST00000458420 LINC01558Q9Y6Z2 57 aa4.05□□□□□ -1.76
CLSTN2-201ENST00000458420 Q75L30 129 aa4.05□□□□□ -1.76
CLSTN2-201ENST00000458420 KRTAP26-1Q6PEX3 210 aa4.04□□□□□ -1.76
CLSTN2-201ENST00000458420 DCHS1Q96JQ0 3298 aa4.03□□□□□ -1.76
CLSTN2-201ENST00000458420 P0C880 135 aa4.03□□□□□ -1.76
CLSTN2-201ENST00000458420 FLNCQ14315 2725 aa4.02□□□□□ -1.77
CLSTN2-201ENST00000458420 LINC00472Q9H8W2 130 aa4.02□□□□□ -1.77
CLSTN2-201ENST00000458420 TNP1P09430 55 aa4.02□□□□□ -1.77
CLSTN2-201ENST00000458420 CELSR1Q9NYQ6 3014 aa4.01□□□□□ -1.77
CLSTN2-201ENST00000458420 IGSF10Q6WRI0 2623 aa4.01□□□□□ -1.77
CLSTN2-201ENST00000458420 NOTCH2NLQ7Z3S9 236 aa4□□□□□ -1.77
CLSTN2-201ENST00000458420 LAMA5O15230 3695 aa4□□□□□ -1.77
CLSTN2-201ENST00000458420 USP34Q70CQ2 3546 aa4□□□□□ -1.77
CLSTN2-201ENST00000458420 CHD9Q3L8U1 2897 aa3.99□□□□□ -1.77
CLSTN2-201ENST00000458420 NIPBLQ6KC79 2804 aaeCLIP3.97□□□□□ -1.77
CLSTN2-201ENST00000458420 SPRR1AP35321 89 aa3.97□□□□□ -1.77
CLSTN2-201ENST00000458420 NBEAQ8NFP9 2946 aa3.97□□□□□ -1.77
CLSTN2-201ENST00000458420 ZFHX4Q86UP3 3567 aa3.97□□□□□ -1.77
CLSTN2-201ENST00000458420 Q5VV11 94 aa3.97□□□□□ -1.77
CLSTN2-201ENST00000458420 NSD1Q96L73 2696 aaPredicted RBP3.96□□□□□ -1.77
CLSTN2-201ENST00000458420 WDFY3Q8IZQ1 3526 aa3.96□□□□□ -1.78
CLSTN2-201ENST00000458420 HIVEP1P15822 2718 aa3.95□□□□□ -1.78
CLSTN2-201ENST00000458420 KRTAP11-1Q8IUC1 163 aa3.95□□□□□ -1.78
CLSTN2-201ENST00000458420 CELSR2Q9HCU4 2923 aa3.92□□□□□ -1.78
CLSTN2-201ENST00000458420 CYSTM1Q9H1C7 97 aa3.91□□□□□ -1.78
CLSTN2-201ENST00000458420 KRTAP16-1A8MUX0 517 aa3.88□□□□□ -1.79
CLSTN2-201ENST00000458420 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
CLSTN2-201ENST00000458420 PRO2289Q9P1D8 64 aa3.87□□□□□ -1.79
CLSTN2-201ENST00000458420 KRTAP13-2Q52LG2 175 aa3.87□□□□□ -1.79
CLSTN2-201ENST00000458420 PKD1L1Q8TDX9 2849 aa3.86□□□□□ -1.79
CLSTN2-201ENST00000458420 DCHS2Q6V1P9 2916 aa3.86□□□□□ -1.79
CLSTN2-201ENST00000458420 ZFHX3Q15911 3703 aa3.86□□□□□ -1.79
CLSTN2-201ENST00000458420 TENM4Q6N022 2769 aa3.85□□□□□ -1.79
CLSTN2-201ENST00000458420 Q6ZRN7 208 aaPredicted RBP3.84□□□□□ -1.79
CLSTN2-201ENST00000458420 TENM1Q9UKZ4 2725 aa3.83□□□□□ -1.8
CLSTN2-201ENST00000458420 KRTAP21-3Q3LHN1 58 aa3.82□□□□□ -1.8
CLSTN2-201ENST00000458420 Q5XG85 94 aa3.81□□□□□ -1.8
CLSTN2-201ENST00000458420 VWFP04275 2813 aa3.81□□□□□ -1.8
CLSTN2-201ENST00000458420 NF1P21359 2839 aa3.8□□□□□ -1.8
CLSTN2-201ENST00000458420 XP32Q5T750 250 aa3.8□□□□□ -1.8
CLSTN2-201ENST00000458420 KRTAP25-1Q3LHN0 102 aa3.79□□□□□ -1.8
CLSTN2-201ENST00000458420 KRTAP4-16G5E9R7 235 aaPredicted RBP3.79□□□□□ -1.8
CLSTN2-201ENST00000458420 RPS29P62273 56 aaKnown RBP3.79□□□□□ -1.8
CLSTN2-201ENST00000458420 CSMD1Q96PZ7 3565 aa3.78□□□□□ -1.8
CLSTN2-201ENST00000458420 ZANQ9Y493 2812 aa3.78□□□□□ -1.8
CLSTN2-201ENST00000458420 CRCT1Q9UGL9 99 aa3.77□□□□□ -1.81
CLSTN2-201ENST00000458420 ASB16-AS1Q495Z4 193 aa3.74□□□□□ -1.81
CLSTN2-201ENST00000458420 TENM2Q9NT68 2774 aa3.73□□□□□ -1.81
CLSTN2-201ENST00000458420 TENM3Q9P273 2699 aa3.72□□□□□ -1.81
CLSTN2-201ENST00000458420 KRTAP7-1Q8IUC3 87 aa3.71□□□□□ -1.82
CLSTN2-201ENST00000458420 KRTAP29-1A8MX34 341 aaPredicted RBP3.71□□□□□ -1.82
CLSTN2-201ENST00000458420 PDZD2O15018 2839 aa3.7□□□□□ -1.82
CLSTN2-201ENST00000458420 TPRXLQ17RH7 258 aa3.7□□□□□ -1.82
CLSTN2-201ENST00000458420 FBN2P35556 2912 aa3.7□□□□□ -1.82
CLSTN2-201ENST00000458420 RELNP78509 3460 aa3.7□□□□□ -1.82
CLSTN2-201ENST00000458420 SPENQ96T58 3664 aaKnown RBP3.65□□□□□ -1.83
CLSTN2-201ENST00000458420 CUBNO60494 3623 aa3.64□□□□□ -1.83
CLSTN2-201ENST00000458420 MXRA5Q9NR99 2828 aa3.64□□□□□ -1.83
CLSTN2-201ENST00000458420 SMG1Q96Q15 3661 aaKnown RBP3.63□□□□□ -1.83
CLSTN2-201ENST00000458420 A6NN06 94 aa3.62□□□□□ -1.83
CLSTN2-201ENST00000458420 DMDP11532 3685 aa3.61□□□□□ -1.83
CLSTN2-201ENST00000458420 KRTAP13-1Q8IUC0 172 aa3.61□□□□□ -1.83
CLSTN2-201ENST00000458420 MUC3AQ02505 3323 aa3.6□□□□□ -1.83
CLSTN2-201ENST00000458420 PP632Q6XCG6 107 aa3.6□□□□□ -1.83
CLSTN2-201ENST00000458420 KRTAP1-4P0C5Y4 121 aa3.59□□□□□ -1.83
CLSTN2-201ENST00000458420 SRRM2Q9UQ35 2752 aaKnown RBP3.59□□□□□ -1.83
CLSTN2-201ENST00000458420 MEGF8Q7Z7M0 2845 aa3.59□□□□□ -1.84
CLSTN2-201ENST00000458420 CSMD2Q7Z408 3487 aa3.58□□□□□ -1.84
CLSTN2-201ENST00000458420 ANK3Q12955 4377 aaKnown RBP3.57□□□□□ -1.84
CLSTN2-201ENST00000458420 KRTAP13-3Q3SY46 172 aa3.57□□□□□ -1.84
CLSTN2-201ENST00000458420 KRTAP12-2P59991 146 aa3.56□□□□□ -1.84
CLSTN2-201ENST00000458420 H0YAA0 97 aa3.56□□□□□ -1.84
CLSTN2-201ENST00000458420 KRTAP15-1Q3LI76 137 aa3.53□□□□□ -1.84
CLSTN2-201ENST00000458420 LORP23490 312 aaPredicted RBP3.51□□□□□ -1.85
CLSTN2-201ENST00000458420 COL7A1Q02388 2944 aa3.51□□□□□ -1.85
CLSTN2-201ENST00000458420 TRRAPQ9Y4A5 3859 aa3.5□□□□□ -1.85
CLSTN2-201ENST00000458420 TGP01266 2768 aa3.48□□□□□ -1.85
CLSTN2-201ENST00000458420 SVEP1Q4LDE5 3571 aa3.47□□□□□ -1.85
CLSTN2-201ENST00000458420 VPS13CQ709C8 3753 aa3.47□□□□□ -1.85
CLSTN2-201ENST00000458420 FBN1P35555 2871 aaKnown RBP3.46□□□□□ -1.86
CLSTN2-201ENST00000458420 CSMD3Q7Z407 3707 aa3.45□□□□□ -1.86
CLSTN2-201ENST00000458420 HRNRQ86YZ3 2850 aaPredicted RBP3.43□□□□□ -1.86
CLSTN2-201ENST00000458420 HUWE1Q7Z6Z7 4374 aaKnown RBP3.43□□□□□ -1.86
CLSTN2-201ENST00000458420 AKAP9Q99996 3911 aa3.42□□□□□ -1.86
CLSTN2-201ENST00000458420 DNAH1Q9P2D7 4330 aa3.4□□□□□ -1.87
CLSTN2-201ENST00000458420 ALMS1Q8TCU4 4167 aa3.38□□□□□ -1.87
CLSTN2-201ENST00000458420 BSNQ9UPA5 3926 aa3.36□□□□□ -1.87
CLSTN2-201ENST00000458420 KRTAP4-5Q9BYR2 181 aa3.35□□□□□ -1.87
CLSTN2-201ENST00000458420 FBN3Q75N90 2809 aa3.33□□□□□ -1.88
CLSTN2-201ENST00000458420 KRTAP13-4Q3LI77 160 aa3.31□□□□□ -1.88
CLSTN2-201ENST00000458420 OTOGQ6ZRI0 2925 aa3.3□□□□□ -1.88
CLSTN2-201ENST00000458420 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.88
CLSTN2-201ENST00000458420 KRTAP10-12P60413 245 aa3.26□□□□□ -1.89
CLSTN2-201ENST00000458420 KRTAP12-1P59990 96 aa3.26□□□□□ -1.89
CLSTN2-201ENST00000458420 KRTAP8-1Q8IUC2 63 aa3.24□□□□□ -1.89
CLSTN2-201ENST00000458420 KRTAP10-5P60370 271 aa3.23□□□□□ -1.89
CLSTN2-201ENST00000458420 DNAH2Q9P225 4427 aa3.21□□□□□ -1.9
CLSTN2-201ENST00000458420 FRAS1Q86XX4 4008 aa3.21□□□□□ -1.9
CLSTN2-201ENST00000458420 DNAH9Q9NYC9 4486 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms