RNA–Protein interactions for RNA: ENST00000457526.1

ZNF440-204, Transcript of zinc finger protein 440, humanhuman

TSL 4

Gene ZNF440, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-204ENST00000457526 PKD1L1Q8TDX9 2849 aa1□□□□□ -2.25
ZNF440-204ENST00000457526 SRRM2Q9UQ35 2752 aaKnown RBP1□□□□□ -2.25
ZNF440-204ENST00000457526 TNP1P09430 55 aa0.99□□□□□ -2.25
ZNF440-204ENST00000457526 TOMM7Q9P0U1 55 aa0.99□□□□□ -2.25
ZNF440-204ENST00000457526 ACANP16112 2415 aa0.99□□□□□ -2.25
ZNF440-204ENST00000457526 UBR5O95071 2799 aaPredicted RBP0.98□□□□□ -2.25
ZNF440-204ENST00000457526 WNK1Q9H4A3 2382 aa0.98□□□□□ -2.25
ZNF440-204ENST00000457526 SETXQ7Z333 2677 aaKnown RBP0.97□□□□□ -2.25
ZNF440-204ENST00000457526 APC2O95996 2303 aa0.95□□□□□ -2.26
ZNF440-204ENST00000457526 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
ZNF440-204ENST00000457526 SPRR2DP22532 72 aa0.94□□□□□ -2.26
ZNF440-204ENST00000457526 A0A0C4DFX4 3053 aa0.94□□□□□ -2.26
ZNF440-204ENST00000457526 SYNE1Q8NF91 8797 aaKnown RBP0.94□□□□□ -2.26
ZNF440-204ENST00000457526 VPS13BQ7Z7G8 4022 aa0.93□□□□□ -2.26
ZNF440-204ENST00000457526 NAV2Q8IVL1 2488 aa0.93□□□□□ -2.26
ZNF440-204ENST00000457526 DEFB110Q30KQ9 67 aa0.92□□□□□ -2.26
ZNF440-204ENST00000457526 DMBT1Q9UGM3 2413 aaPredicted RBP0.91□□□□□ -2.26
ZNF440-204ENST00000457526 LRP1Q07954 4544 aaKnown RBP0.91□□□□□ -2.26
ZNF440-204ENST00000457526 KMT2AQ03164 3969 aa0.91□□□□□ -2.26
ZNF440-204ENST00000457526 NF1P21359 2839 aa0.9□□□□□ -2.26
ZNF440-204ENST00000457526 LPAP08519 4548 aa0.9□□□□□ -2.27
ZNF440-204ENST00000457526 MYCBP2O75592 4640 aa0.9□□□□□ -2.27
ZNF440-204ENST00000457526 ACACAQ13085 2346 aa0.89□□□□□ -2.27
ZNF440-204ENST00000457526 SACSQ9NZJ4 4579 aa0.89□□□□□ -2.27
ZNF440-204ENST00000457526 MTORP42345 2549 aa0.88□□□□□ -2.27
ZNF440-204ENST00000457526 NCOR2Q9Y618 2525 aa0.88□□□□□ -2.27
ZNF440-204ENST00000457526 GCN1Q92616 2671 aaKnown RBP0.87□□□□□ -2.27
ZNF440-204ENST00000457526 SPRR2BP35325 72 aa0.87□□□□□ -2.27
ZNF440-204ENST00000457526 SETD2Q9BYW2 2564 aaPredicted RBP0.87□□□□□ -2.27
ZNF440-204ENST00000457526 USP24Q9UPU5 2620 aa0.86□□□□□ -2.27
ZNF440-204ENST00000457526 DNAH11Q96DT5 4516 aa0.86□□□□□ -2.27
ZNF440-204ENST00000457526 NSD1Q96L73 2696 aaPredicted RBP0.86□□□□□ -2.27
ZNF440-204ENST00000457526 COL6A5A8TX70 2615 aa0.85□□□□□ -2.27
ZNF440-204ENST00000457526 CACNA1AO00555 2505 aa0.85□□□□□ -2.27
ZNF440-204ENST00000457526 FLNCQ14315 2725 aa0.85□□□□□ -2.27
ZNF440-204ENST00000457526 SPTBN4Q9H254 2564 aa0.84□□□□□ -2.27
ZNF440-204ENST00000457526 FLNBO75369 2602 aaKnown RBP0.84□□□□□ -2.27
ZNF440-204ENST00000457526 SPART-AS1P0CW21 52 aa0.84□□□□□ -2.27
ZNF440-204ENST00000457526 TTTY10Q9BZA0 68 aa0.84□□□□□ -2.27
ZNF440-204ENST00000457526 RIF1Q5UIP0 2472 aaKnown RBP0.83□□□□□ -2.28
ZNF440-204ENST00000457526 PKD1P98161 4303 aa0.83□□□□□ -2.28
ZNF440-204ENST00000457526 PDZD2O15018 2839 aa0.83□□□□□ -2.28
ZNF440-204ENST00000457526 STAB1Q9NY15 2570 aa0.82□□□□□ -2.28
ZNF440-204ENST00000457526 DNAH3Q8TD57 4116 aa0.81□□□□□ -2.28
ZNF440-204ENST00000457526 LRRK2Q5S007 2527 aa0.8□□□□□ -2.28
ZNF440-204ENST00000457526 PRCDQ00LT1 54 aa0.79□□□□□ -2.28
ZNF440-204ENST00000457526 EPG5Q9HCE0 2579 aa0.79□□□□□ -2.28
ZNF440-204ENST00000457526 IGSF10Q6WRI0 2623 aa0.79□□□□□ -2.28
ZNF440-204ENST00000457526 HRNRQ86YZ3 2850 aaPredicted RBP0.78□□□□□ -2.28
ZNF440-204ENST00000457526 SONP18583 2426 aaKnown RBP0.78□□□□□ -2.28
ZNF440-204ENST00000457526 ANKHD1Q8IWZ3 2542 aaKnown RBP0.78□□□□□ -2.28
ZNF440-204ENST00000457526 LINC01590Q5TEZ4 76 aa0.78□□□□□ -2.28
ZNF440-204ENST00000457526 DEFB104AQ8WTQ1 72 aa0.78□□□□□ -2.28
ZNF440-204ENST00000457526 CUBNO60494 3623 aa0.78□□□□□ -2.28
ZNF440-204ENST00000457526 ZZEF1O43149 2961 aa0.78□□□□□ -2.29
ZNF440-204ENST00000457526 FAM186AA6NE01 2351 aa0.77□□□□□ -2.29
ZNF440-204ENST00000457526 AHNAK2Q8IVF2 5795 aa0.77□□□□□ -2.29
ZNF440-204ENST00000457526 UTP20O75691 2785 aaKnown RBP0.77□□□□□ -2.29
ZNF440-204ENST00000457526 DMXL1Q9Y485 3027 aa0.77□□□□□ -2.29
ZNF440-204ENST00000457526 DNAH9Q9NYC9 4486 aa0.77□□□□□ -2.29
ZNF440-204ENST00000457526 MUC5BQ9HC84 5762 aaPredicted RBP0.76□□□□□ -2.29
ZNF440-204ENST00000457526 MACF1Q9UPN3 7388 aaKnown RBP0.76□□□□□ -2.29
ZNF440-204ENST00000457526 ANK3Q12955 4377 aaKnown RBP0.76□□□□□ -2.29
ZNF440-204ENST00000457526 SPG11Q96JI7 2443 aa0.75□□□□□ -2.29
ZNF440-204ENST00000457526 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
ZNF440-204ENST00000457526 H3BSH0 61 aa0.74□□□□□ -2.29
ZNF440-204ENST00000457526 HECTD4Q9Y4D8 3996 aa0.73□□□□□ -2.29
ZNF440-204ENST00000457526 DNAH2Q9P225 4427 aa0.73□□□□□ -2.29
ZNF440-204ENST00000457526 SPRR2AP35326 72 aa0.73□□□□□ -2.29
ZNF440-204ENST00000457526 KRTAP6-2Q3LI66 62 aa0.73□□□□□ -2.29
ZNF440-204ENST00000457526 ANKRD11Q6UB99 2663 aaPredicted RBP0.73□□□□□ -2.29
ZNF440-204ENST00000457526 CCDC168Q8NDH2 2452 aa0.73□□□□□ -2.29
ZNF440-204ENST00000457526 TACC2O95359 2948 aa0.72□□□□□ -2.29
ZNF440-204ENST00000457526 HSPG2P98160 4391 aa0.72□□□□□ -2.29
ZNF440-204ENST00000457526 VPS13DQ5THJ4 4388 aa0.72□□□□□ -2.29
ZNF440-204ENST00000457526 AHNAKQ09666 5890 aaKnown RBP0.72□□□□□ -2.29
ZNF440-204ENST00000457526 PKHD1L1Q86WI1 4243 aa0.71□□□□□ -2.3
ZNF440-204ENST00000457526 DCHS2Q6V1P9 2916 aa0.71□□□□□ -2.3
ZNF440-204ENST00000457526 FLGP20930 4061 aaPredicted RBP0.71□□□□□ -2.3
ZNF440-204ENST00000457526 DYNC2H1Q8NCM8 4307 aaKnown RBP0.71□□□□□ -2.3
ZNF440-204ENST00000457526 COL7A1Q02388 2944 aa0.71□□□□□ -2.3
ZNF440-204ENST00000457526 TENM3Q9P273 2699 aa0.71□□□□□ -2.3
ZNF440-204ENST00000457526 MT1AP04731 61 aa0.7□□□□□ -2.3
ZNF440-204ENST00000457526 FASNP49327 2511 aaKnown RBP0.7□□□□□ -2.3
ZNF440-204ENST00000457526 ACACBO00763 2458 aa0.7□□□□□ -2.3
ZNF440-204ENST00000457526 TENM2Q9NT68 2774 aa0.69□□□□□ -2.3
ZNF440-204ENST00000457526 FAT4Q6V0I7 4981 aa0.69□□□□□ -2.3
ZNF440-204ENST00000457526 KRTAP5-10Q6L8G5 202 aa0.69□□□□□ -2.3
ZNF440-204ENST00000457526 KRTAP8-1Q8IUC2 63 aa0.69□□□□□ -2.3
ZNF440-204ENST00000457526 PKHD1P08F94 4074 aa0.68□□□□□ -2.3
ZNF440-204ENST00000457526 CHD7Q9P2D1 2997 aa0.67□□□□□ -2.3
ZNF440-204ENST00000457526 K7EIM0 57 aa0.67□□□□□ -2.3
ZNF440-204ENST00000457526 LRP1BQ9NZR2 4599 aa0.66□□□□□ -2.3
ZNF440-204ENST00000457526 APOBP04114 4563 aaKnown RBP0.66□□□□□ -2.3
ZNF440-204ENST00000457526 NBEAL2Q6ZNJ1 2754 aa0.66□□□□□ -2.3
ZNF440-204ENST00000457526 COL12A1Q99715 3063 aa0.66□□□□□ -2.3
ZNF440-204ENST00000457526 RANBP2P49792 3224 aaKnown RBP0.64□□□□□ -2.31
ZNF440-204ENST00000457526 SPENQ96T58 3664 aaKnown RBP0.64□□□□□ -2.31
ZNF440-204ENST00000457526 NBEAQ8NFP9 2946 aa0.64□□□□□ -2.31
ZNF440-204ENST00000457526 DNAH6Q9C0G6 4158 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms