RNA–Protein interactions for RNA: ENST00000457526.1

ZNF440-204, Transcript of zinc finger protein 440, humanhuman

TSL 4

Gene ZNF440, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-204ENST00000457526 AEBP2Q6ZN18 517 aaPredicted RBP18.87■□□□□ 0.61
ZNF440-204ENST00000457526 CHIC1Q5VXU3 224 aa17.92■□□□□ 0.46
ZNF440-204ENST00000457526 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
ZNF440-204ENST00000457526 SENP3Q9H4L4 574 aaPredicted RBP15.84■□□□□ 0.13
ZNF440-204ENST00000457526 FOXD1Q16676 465 aa14.91□□□□□ -0.02
ZNF440-204ENST00000457526 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.12
ZNF440-204ENST00000457526 PPP6R1Q9UPN7 881 aa14.16□□□□□ -0.14
ZNF440-204ENST00000457526 ADRA2BP18089 450 aa14.1□□□□□ -0.15
ZNF440-204ENST00000457526 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
ZNF440-204ENST00000457526 PIAS4Q8N2W9 510 aaPredicted RBP13.91□□□□□ -0.18
ZNF440-204ENST00000457526 MSH5O43196 834 aa13.77□□□□□ -0.21
ZNF440-204ENST00000457526 MAPK8IP2Q13387 824 aaPredicted RBP12.96□□□□□ -0.33
ZNF440-204ENST00000457526 PPP4R3CPQ6ZMV5 832 aa12.67□□□□□ -0.38
ZNF440-204ENST00000457526 SCAF1Q9H7N4 1312 aaKnown RBP12.63□□□□□ -0.39
ZNF440-204ENST00000457526 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
ZNF440-204ENST00000457526 EHMT2Q96KQ7 1210 aa12.39□□□□□ -0.43
ZNF440-204ENST00000457526 CNKSR2Q8WXI2 1034 aa12.31□□□□□ -0.44
ZNF440-204ENST00000457526 SLC24A1O60721 1099 aa12.27□□□□□ -0.45
ZNF440-204ENST00000457526 HOXD11P31277 338 aaPredicted RBP12.23□□□□□ -0.45
ZNF440-204ENST00000457526 DCAF8L1A6NGE4 600 aa12.19□□□□□ -0.46
ZNF440-204ENST00000457526 RNF216Q9NWF9 866 aaPredicted RBP12.15□□□□□ -0.46
ZNF440-204ENST00000457526 NCBP3Q53F19 620 aaKnown RBP12.08□□□□□ -0.48
ZNF440-204ENST00000457526 NPM3O75607 178 aaKnown RBP12.07□□□□□ -0.48
ZNF440-204ENST00000457526 KCNA4P22459 653 aa12.05□□□□□ -0.48
ZNF440-204ENST00000457526 CACNB1Q02641 598 aaPredicted RBP12.05□□□□□ -0.48
ZNF440-204ENST00000457526 RNF39Q9H2S5 420 aa11.8□□□□□ -0.52
ZNF440-204ENST00000457526 CSRNP3Q8WYN3 585 aa11.68□□□□□ -0.54
ZNF440-204ENST00000457526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.67□□□□□ -0.54
ZNF440-204ENST00000457526 DNAJC5BQ9UF47 199 aa11.6□□□□□ -0.55
ZNF440-204ENST00000457526 C1QBPQ07021 282 aaKnown RBP11.55□□□□□ -0.56
ZNF440-204ENST00000457526 SLC4A2P04920 1241 aa11.54□□□□□ -0.56
ZNF440-204ENST00000457526 RTN4Q9NQC3 1192 aaKnown RBP11.51□□□□□ -0.57
ZNF440-204ENST00000457526 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
ZNF440-204ENST00000457526 AMER1Q5JTC6 1135 aaPredicted RBP11.49□□□□□ -0.57
ZNF440-204ENST00000457526 SLC4A1APQ9BWU0 796 aaKnown RBP11.45□□□□□ -0.58
ZNF440-204ENST00000457526 SPINK5Q9NQ38 1064 aaPredicted RBP11.35□□□□□ -0.59
ZNF440-204ENST00000457526 CAPN15O75808 1086 aa11.24□□□□□ -0.61
ZNF440-204ENST00000457526 TRHP20396 242 aaPredicted RBP11.14□□□□□ -0.63
ZNF440-204ENST00000457526 DSG3P32926 999 aa11.14□□□□□ -0.63
ZNF440-204ENST00000457526 ZBTB22O15209 634 aa11.13□□□□□ -0.63
ZNF440-204ENST00000457526 ABCB7O75027 752 aa11.08□□□□□ -0.64
ZNF440-204ENST00000457526 MYCNP04198 464 aaPredicted RBP11.05□□□□□ -0.64
ZNF440-204ENST00000457526 FOXD4L1Q9NU39 408 aa11.05□□□□□ -0.64
ZNF440-204ENST00000457526 ATF5Q9Y2D1 282 aaPredicted RBP11.02□□□□□ -0.65
ZNF440-204ENST00000457526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11□□□□□ -0.65
ZNF440-204ENST00000457526 HNRNPUL2Q1KMD3 747 aaKnown RBP11□□□□□ -0.65
ZNF440-204ENST00000457526 SAMD1Q6SPF0 538 aaPredicted RBP11□□□□□ -0.65
ZNF440-204ENST00000457526 POTEHQ6S545 545 aa10.95□□□□□ -0.66
ZNF440-204ENST00000457526 ZNF219Q9P2Y4 722 aaPredicted RBP10.95□□□□□ -0.66
ZNF440-204ENST00000457526 APLP2Q06481 763 aa10.91□□□□□ -0.66
ZNF440-204ENST00000457526 POLA2Q14181 598 aa10.86□□□□□ -0.67
ZNF440-204ENST00000457526 PRKCSHP14314 528 aaPredicted RBP10.66□□□□□ -0.7
ZNF440-204ENST00000457526 DAXXQ9UER7 740 aaPredicted RBP10.65□□□□□ -0.7
ZNF440-204ENST00000457526 ATXN8OSP0DMR3 200 aa10.6□□□□□ -0.71
ZNF440-204ENST00000457526 BCANQ96GW7 911 aa10.59□□□□□ -0.71
ZNF440-204ENST00000457526 FKBP8Q14318 412 aa10.53□□□□□ -0.72
ZNF440-204ENST00000457526 TAOK2Q9UL54 1235 aa10.53□□□□□ -0.72
ZNF440-204ENST00000457526 PLCB2Q00722 1185 aa10.52□□□□□ -0.73
ZNF440-204ENST00000457526 OSCARQ8IYS5 282 aa10.51□□□□□ -0.73
ZNF440-204ENST00000457526 MKRN4PQ13434 485 aaPredicted RBP10.46□□□□□ -0.73
ZNF440-204ENST00000457526 RBM42Q9BTD8 480 aaKnown RBP10.44□□□□□ -0.74
ZNF440-204ENST00000457526 HAP1P54257 671 aaPredicted RBP10.43□□□□□ -0.74
ZNF440-204ENST00000457526 ZBTB12Q9Y330 459 aaPredicted RBP10.41□□□□□ -0.74
ZNF440-204ENST00000457526 ARXQ96QS3 562 aa10.38□□□□□ -0.75
ZNF440-204ENST00000457526 TPRNQ4KMQ1 711 aa10.37□□□□□ -0.75
ZNF440-204ENST00000457526 FBLN2P98095 1184 aa10.32□□□□□ -0.76
ZNF440-204ENST00000457526 REM2Q8IYK8 340 aaPredicted RBP10.31□□□□□ -0.76
ZNF440-204ENST00000457526 AKT1S1Q96B36 256 aa10.31□□□□□ -0.76
ZNF440-204ENST00000457526 CHRDL2Q6WN34 429 aa10.29□□□□□ -0.76
ZNF440-204ENST00000457526 TIMELESSQ9UNS1 1208 aa10.29□□□□□ -0.76
ZNF440-204ENST00000457526 VSIG10Q8N0Z9 540 aa10.25□□□□□ -0.77
ZNF440-204ENST00000457526 TULP1O00294 542 aaPredicted RBP10.23□□□□□ -0.77
ZNF440-204ENST00000457526 PITPNM1O00562 1244 aa10.21□□□□□ -0.77
ZNF440-204ENST00000457526 SPDYE2BA6NHP3 402 aa10.2□□□□□ -0.78
ZNF440-204ENST00000457526 SPDYE6P0CI01 402 aa10.2□□□□□ -0.78
ZNF440-204ENST00000457526 SPDYE2Q495Y8 402 aa10.2□□□□□ -0.78
ZNF440-204ENST00000457526 ZNF692Q9BU19 519 aaPredicted RBP10.19□□□□□ -0.78
ZNF440-204ENST00000457526 SSUH2Q9Y2M2 353 aa10.14□□□□□ -0.79
ZNF440-204ENST00000457526 PIP4P2Q8N4L2 257 aa10.12□□□□□ -0.79
ZNF440-204ENST00000457526 ERICH6Q7L0X2 663 aa10.11□□□□□ -0.79
ZNF440-204ENST00000457526 DCAF8L2P0C7V8 631 aa10.1□□□□□ -0.79
ZNF440-204ENST00000457526 HOMEZQ8IX15 550 aa10.1□□□□□ -0.79
ZNF440-204ENST00000457526 CLEC11AQ9Y240 323 aa10.1□□□□□ -0.79
ZNF440-204ENST00000457526 SP7Q8TDD2 431 aaPredicted RBP10.09□□□□□ -0.79
ZNF440-204ENST00000457526 PABPN1Q86U42 306 aaKnown RBP eCLIP10.07□□□□□ -0.8
ZNF440-204ENST00000457526 GTF3C3Q9Y5Q9 886 aa10.07□□□□□ -0.8
ZNF440-204ENST00000457526 FXR2P51116 673 aaKnown RBP eCLIP10.05□□□□□ -0.8
ZNF440-204ENST00000457526 KDM2AQ9Y2K7 1162 aa10□□□□□ -0.81
ZNF440-204ENST00000457526 SPDYE1Q8NFV5 336 aaPredicted RBP9.99□□□□□ -0.81
ZNF440-204ENST00000457526 CHADLQ6NUI6 762 aa9.97□□□□□ -0.81
ZNF440-204ENST00000457526 SPDYE4A6NLX3 237 aa9.95□□□□□ -0.82
ZNF440-204ENST00000457526 PRKAR2AP13861 404 aaKnown RBP9.94□□□□□ -0.82
ZNF440-204ENST00000457526 EVX2Q03828 476 aa9.94□□□□□ -0.82
ZNF440-204ENST00000457526 RANGAP1P46060 587 aaPredicted RBP9.93□□□□□ -0.82
ZNF440-204ENST00000457526 HAX1O00165 279 aa9.9□□□□□ -0.82
ZNF440-204ENST00000457526 PRR29P0C7W0 189 aa9.89□□□□□ -0.83
ZNF440-204ENST00000457526 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.88□□□□□ -0.83
ZNF440-204ENST00000457526 FBXO3Q9UK99 471 aa9.85□□□□□ -0.83
ZNF440-204ENST00000457526 TMEM132AQ24JP5 1023 aa9.84□□□□□ -0.83
ZNF440-204ENST00000457526 C14orf37Q86TY3 774 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms