RNA–Protein interactions for RNA: ENST00000456378.1

UBP1-205, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-205ENST00000456378 LOC110117498A0A087WWA1 95 aa12.17□□□□□ -0.46
UBP1-205ENST00000456378 A0A1B0GVX0 72 aa12.17□□□□□ -0.46
UBP1-205ENST00000456378 TRBV20-1A0A075B6N2 111 aa12.15□□□□□ -0.46
UBP1-205ENST00000456378 C21orf62-AS1Q17RA5 79 aa12.15□□□□□ -0.46
UBP1-205ENST00000456378 LYRM7Q5U5X0 104 aa12.15□□□□□ -0.46
UBP1-205ENST00000456378 C14orf132Q9NPU4 83 aa12.13□□□□□ -0.47
UBP1-205ENST00000456378 C8orf87E5RJ46 101 aa12.12□□□□□ -0.47
UBP1-205ENST00000456378 C9orf118A6NHY6 69 aa12.11□□□□□ -0.47
UBP1-205ENST00000456378 J3KT08 172 aa12.11□□□□□ -0.47
UBP1-205ENST00000456378 TAX1BP3O14907 124 aa12.1□□□□□ -0.47
UBP1-205ENST00000456378 PDE6GP18545 87 aa12.09□□□□□ -0.47
UBP1-205ENST00000456378 KRTAP9-6A0A140TA67 174 aa12.08□□□□□ -0.48
UBP1-205ENST00000456378 A0A1B0GW54 56 aa12.08□□□□□ -0.48
UBP1-205ENST00000456378 A0A1W2PPM0 123 aa12.04□□□□□ -0.48
UBP1-205ENST00000456378 MTURNQ8N3F0 131 aa12.01□□□□□ -0.49
UBP1-205ENST00000456378 A8MWP4 228 aa12□□□□□ -0.49
UBP1-205ENST00000456378 NDUFB1O75438 58 aa12□□□□□ -0.49
UBP1-205ENST00000456378 IGKV3D-7A0A0C4DH55 119 aa11.99□□□□□ -0.49
UBP1-205ENST00000456378 HRES1P13985 223 aa11.99□□□□□ -0.49
UBP1-205ENST00000456378 H3BT86 120 aa11.98□□□□□ -0.49
UBP1-205ENST00000456378 MPLKIPQ8TAP9 179 aa11.97□□□□□ -0.49
UBP1-205ENST00000456378 C8orf17Q9NRJ1 99 aa11.97□□□□□ -0.49
UBP1-205ENST00000456378 Q8N9P0 234 aaPredicted RBP11.95□□□□□ -0.5
UBP1-205ENST00000456378 ZCCHC13Q8WW36 166 aaKnown RBP11.95□□□□□ -0.5
UBP1-205ENST00000456378 NREPQ16612 68 aa11.94□□□□□ -0.5
UBP1-205ENST00000456378 PRR15Q8IV56 129 aa11.9□□□□□ -0.5
UBP1-205ENST00000456378 FSIP2Q5CZC0 6907 aa11.88□□□□□ -0.51
UBP1-205ENST00000456378 FAM236DA0A1B0GTK5 79 aa11.87□□□□□ -0.51
UBP1-205ENST00000456378 FAM236CP0DP71 79 aa11.87□□□□□ -0.51
UBP1-205ENST00000456378 SPCS1Q9Y6A9 102 aa11.87□□□□□ -0.51
UBP1-205ENST00000456378 RBM12B-AS1Q9P1G2 102 aa11.86□□□□□ -0.51
UBP1-205ENST00000456378 CRCT1Q9UGL9 99 aa11.86□□□□□ -0.51
UBP1-205ENST00000456378 Q6ZVQ6 151 aa11.85□□□□□ -0.51
UBP1-205ENST00000456378 SMCPP49901 116 aaPredicted RBP11.84□□□□□ -0.51
UBP1-205ENST00000456378 SPINK7P58062 85 aa11.84□□□□□ -0.51
UBP1-205ENST00000456378 KRTAP9-8Q9BYQ0 159 aa11.83□□□□□ -0.52
UBP1-205ENST00000456378 MMP24-AS1A0A0U1RRL7 71 aa11.82□□□□□ -0.52
UBP1-205ENST00000456378 K7EQZ3 153 aa11.79□□□□□ -0.52
UBP1-205ENST00000456378 COL5A1-AS1Q5SY13 56 aa11.79□□□□□ -0.52
UBP1-205ENST00000456378 TMEM254Q8TBM7 123 aa11.76□□□□□ -0.53
UBP1-205ENST00000456378 MRPL34Q9BQ48 92 aaKnown RBP11.75□□□□□ -0.53
UBP1-205ENST00000456378 PRO0461Q9UI25 63 aa11.75□□□□□ -0.53
UBP1-205ENST00000456378 BPY2O14599 106 aa11.72□□□□□ -0.53
UBP1-205ENST00000456378 hDV103S1A0JD37 113 aa11.71□□□□□ -0.53
UBP1-205ENST00000456378 K7EP34 96 aa11.69□□□□□ -0.54
UBP1-205ENST00000456378 Q8N9L7 120 aa11.66□□□□□ -0.54
UBP1-205ENST00000456378 MT2AP02795 61 aa11.65□□□□□ -0.54
UBP1-205ENST00000456378 WFDC13Q8IUB5 93 aa11.65□□□□□ -0.54
UBP1-205ENST00000456378 NDUFS5O43920 106 aa11.63□□□□□ -0.55
UBP1-205ENST00000456378 LINC00846Q9NV44 126 aa11.61□□□□□ -0.55
UBP1-205ENST00000456378 Q5W150 140 aa11.58□□□□□ -0.56
UBP1-205ENST00000456378 MT1FP04733 61 aa11.57□□□□□ -0.56
UBP1-205ENST00000456378 PCP4L1A6NKN8 68 aa11.56□□□□□ -0.56
UBP1-205ENST00000456378 CASC2Q6XLA1 102 aa11.55□□□□□ -0.56
UBP1-205ENST00000456378 UBL5Q9BZL1 73 aa11.52□□□□□ -0.57
UBP1-205ENST00000456378 GTF2H5Q6ZYL4 71 aa11.51□□□□□ -0.57
UBP1-205ENST00000456378 HCG22E2RYF7 251 aa11.49□□□□□ -0.57
UBP1-205ENST00000456378 IGKV2D-30A0A075B6S6 120 aa11.47□□□□□ -0.57
UBP1-205ENST00000456378 IGKV2-30P06310 120 aa11.47□□□□□ -0.57
UBP1-205ENST00000456378 KRTAP10-10P60014 251 aa11.47□□□□□ -0.57
UBP1-205ENST00000456378 F8W1H4 67 aa11.46□□□□□ -0.57
UBP1-205ENST00000456378 KRTAP9-3Q9BYQ3 159 aa11.46□□□□□ -0.57
UBP1-205ENST00000456378 USH2AO75445 5202 aa11.46□□□□□ -0.58
UBP1-205ENST00000456378 ETDBQ3ZM63 59 aa11.43□□□□□ -0.58
UBP1-205ENST00000456378 C7orf65Q6ZTY9 151 aa11.42□□□□□ -0.58
UBP1-205ENST00000456378 LCE2BO14633 110 aa11.4□□□□□ -0.58
UBP1-205ENST00000456378 H1FX-AS1Q4G0G2 97 aa11.4□□□□□ -0.58
UBP1-205ENST00000456378 CXCL6P80162 114 aa11.39□□□□□ -0.59
UBP1-205ENST00000456378 SSPOA2VEC9 5147 aa11.34□□□□□ -0.59
UBP1-205ENST00000456378 C4orf26Q17RF5 130 aa11.29□□□□□ -0.6
UBP1-205ENST00000456378 KRTAP3-1Q9BYR8 98 aa11.19□□□□□ -0.62
UBP1-205ENST00000456378 TP53AIP1Q9HCN2 124 aa11.19□□□□□ -0.62
UBP1-205ENST00000456378 KRTAP19-1Q8IUB9 90 aa11.15□□□□□ -0.62
UBP1-205ENST00000456378 ACYP1P07311 99 aa11.13□□□□□ -0.63
UBP1-205ENST00000456378 FCGBPQ9Y6R7 5405 aaPredicted RBP11.08□□□□□ -0.64
UBP1-205ENST00000456378 FAM240AA0A1B0GVK7 77 aa11.08□□□□□ -0.64
UBP1-205ENST00000456378 C1orf64Q8NEQ6 169 aa11.08□□□□□ -0.64
UBP1-205ENST00000456378 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.05□□□□□ -0.64
UBP1-205ENST00000456378 C5orf47Q569G3 176 aa11.03□□□□□ -0.64
UBP1-205ENST00000456378 CYP4F30PQ9H0H9 118 aa11.01□□□□□ -0.65
UBP1-205ENST00000456378 ATP5EP2Q5VTU8 51 aa11□□□□□ -0.65
UBP1-205ENST00000456378 S4R3F8 94 aa10.99□□□□□ -0.65
UBP1-205ENST00000456378 HIST1H4AP62805 103 aaKnown RBP10.97□□□□□ -0.65
UBP1-205ENST00000456378 LCA10Q71F78 164 aa10.96□□□□□ -0.65
UBP1-205ENST00000456378 TRAV22A0A0B4J277 110 aa10.95□□□□□ -0.66
UBP1-205ENST00000456378 A0A1B0GV90 55 aa10.95□□□□□ -0.66
UBP1-205ENST00000456378 KRTAP19-6Q3LI70 58 aa10.95□□□□□ -0.66
UBP1-205ENST00000456378 CSAG1Q6PB30 78 aa10.91□□□□□ -0.66
UBP1-205ENST00000456378 LOC101927531A0A1B0GV80 90 aa10.89□□□□□ -0.67
UBP1-205ENST00000456378 LINC00643Q86TS7 51 aa10.88□□□□□ -0.67
UBP1-205ENST00000456378 A0A087WVE0 104 aa10.87□□□□□ -0.67
UBP1-205ENST00000456378 KRTAP9-7A8MTY7 169 aa10.87□□□□□ -0.67
UBP1-205ENST00000456378 UQCRQO14949 82 aa10.87□□□□□ -0.67
UBP1-205ENST00000456378 KRTAP3-3Q9BYR6 98 aa10.86□□□□□ -0.67
UBP1-205ENST00000456378 FAM236AA0A1B0GUQ0 79 aa10.82□□□□□ -0.68
UBP1-205ENST00000456378 FAM236BA0A1B0GV22 79 aa10.82□□□□□ -0.68
UBP1-205ENST00000456378 H0Y9P7 68 aa10.82□□□□□ -0.68
UBP1-205ENST00000456378 ATOX1O00244 68 aa10.77□□□□□ -0.69
UBP1-205ENST00000456378 MACF1Q9UPN3 7388 aaKnown RBP10.72□□□□□ -0.69
UBP1-205ENST00000456378 SPRR2GQ9BYE4 73 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms