RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 H3BS24 57 aa2.72□□□□□ -1.97
DEPDC1-202ENST00000456315 KRTAP13-3Q3SY46 172 aa2.72□□□□□ -1.97
DEPDC1-202ENST00000456315 IGLV7-46A0A075B6I9 117 aa2.72□□□□□ -1.97
DEPDC1-202ENST00000456315 IGKV2-24A0A0C4DH68 120 aa2.71□□□□□ -1.98
DEPDC1-202ENST00000456315 RTL8CO15255 209 aa2.7□□□□□ -1.98
DEPDC1-202ENST00000456315 CDC42SE1Q9NRR8 79 aa2.7□□□□□ -1.98
DEPDC1-202ENST00000456315 OXLD1Q5BKU9 147 aa2.7□□□□□ -1.98
DEPDC1-202ENST00000456315 BIRC6Q9NR09 4857 aa2.7□□□□□ -1.98
DEPDC1-202ENST00000456315 MRPL55Q7Z7F7 128 aaKnown RBP2.7□□□□□ -1.98
DEPDC1-202ENST00000456315 LINC01558Q9Y6Z2 57 aa2.7□□□□□ -1.98
DEPDC1-202ENST00000456315 FAT4Q6V0I7 4981 aa2.69□□□□□ -1.98
DEPDC1-202ENST00000456315 CASC2Q6XLA1 102 aa2.69□□□□□ -1.98
DEPDC1-202ENST00000456315 SPANXA2-OT1Q8N9U9 137 aa2.69□□□□□ -1.98
DEPDC1-202ENST00000456315 DYNC1H1Q14204 4646 aaKnown RBP2.69□□□□□ -1.98
DEPDC1-202ENST00000456315 PCLOQ9Y6V0 5065 aa2.69□□□□□ -1.98
DEPDC1-202ENST00000456315 MDFIQ99750 246 aa2.68□□□□□ -1.98
DEPDC1-202ENST00000456315 HERC2O95714 4834 aa2.68□□□□□ -1.98
DEPDC1-202ENST00000456315 RNF213Q63HN8 5207 aa2.68□□□□□ -1.98
DEPDC1-202ENST00000456315 LRP2P98164 4655 aa2.68□□□□□ -1.98
DEPDC1-202ENST00000456315 C7orf65Q6ZTY9 151 aa2.68□□□□□ -1.98
DEPDC1-202ENST00000456315 LIMD2Q9BT23 127 aa2.68□□□□□ -1.98
DEPDC1-202ENST00000456315 LYRM9A8MSI8 78 aa2.67□□□□□ -1.98
DEPDC1-202ENST00000456315 IGLV8-61A0A075B6I0 122 aa2.67□□□□□ -1.98
DEPDC1-202ENST00000456315 DEFB113Q30KQ7 82 aa2.66□□□□□ -1.98
DEPDC1-202ENST00000456315 LINC01554Q52M75 96 aa2.66□□□□□ -1.98
DEPDC1-202ENST00000456315 CSAG1Q6PB30 78 aa2.66□□□□□ -1.98
DEPDC1-202ENST00000456315 CRIPTQ9P021 101 aa2.65□□□□□ -1.98
DEPDC1-202ENST00000456315 RYR2Q92736 4967 aa2.65□□□□□ -1.99
DEPDC1-202ENST00000456315 A8MWP4 228 aa2.65□□□□□ -1.99
DEPDC1-202ENST00000456315 SPART-AS1P0CW21 52 aa2.65□□□□□ -1.99
DEPDC1-202ENST00000456315 KRTAP10-11P60412 298 aa2.65□□□□□ -1.99
DEPDC1-202ENST00000456315 NKAPP1Q8N9T2 125 aa2.65□□□□□ -1.99
DEPDC1-202ENST00000456315 UBR4Q5T4S7 5183 aa2.64□□□□□ -1.99
DEPDC1-202ENST00000456315 TLX1NBP0CAT3 122 aa2.64□□□□□ -1.99
DEPDC1-202ENST00000456315 NDUFB1O75438 58 aa2.64□□□□□ -1.99
DEPDC1-202ENST00000456315 P0C880 135 aa2.64□□□□□ -1.99
DEPDC1-202ENST00000456315 KRTAP13-1Q8IUC0 172 aa2.64□□□□□ -1.99
DEPDC1-202ENST00000456315 MP68P56378 58 aa2.64□□□□□ -1.99
DEPDC1-202ENST00000456315 LINC01556Q5JQF7 62 aa2.64□□□□□ -1.99
DEPDC1-202ENST00000456315 PLA2G1BP04054 148 aaKnown RBP2.63□□□□□ -1.99
DEPDC1-202ENST00000456315 DHRS4-AS1Q9P1J3 65 aa2.63□□□□□ -1.99
DEPDC1-202ENST00000456315 H0Y9J4 135 aa2.62□□□□□ -1.99
DEPDC1-202ENST00000456315 DNAH10OSP0CZ25 163 aa2.62□□□□□ -1.99
DEPDC1-202ENST00000456315 A0A1B0GW54 56 aa2.61□□□□□ -1.99
DEPDC1-202ENST00000456315 PLA2G2DQ9UNK4 145 aa2.61□□□□□ -1.99
DEPDC1-202ENST00000456315 SPRR1BP22528 89 aa2.61□□□□□ -1.99
DEPDC1-202ENST00000456315 REG3GQ6UW15 175 aa2.61□□□□□ -1.99
DEPDC1-202ENST00000456315 WWC2-AS2Q96NR7 200 aa2.61□□□□□ -1.99
DEPDC1-202ENST00000456315 KIAA1109Q2LD37 5005 aa2.61□□□□□ -1.99
DEPDC1-202ENST00000456315 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.61□□□□□ -1.99
DEPDC1-202ENST00000456315 C8orf17Q9NRJ1 99 aa2.6□□□□□ -1.99
DEPDC1-202ENST00000456315 H3BQ85 93 aa2.6□□□□□ -1.99
DEPDC1-202ENST00000456315 ZNF861PO60384 105 aa2.6□□□□□ -1.99
DEPDC1-202ENST00000456315 DEFB131BA0A096LNP1 70 aa2.6□□□□□ -1.99
DEPDC1-202ENST00000456315 SPATA8Q6RVD6 105 aa2.59□□□□□ -1.99
DEPDC1-202ENST00000456315 IGHV6-1A0A0B4J1U7 121 aa2.59□□□□□ -2
DEPDC1-202ENST00000456315 KRTAP16-1A8MUX0 517 aa2.59□□□□□ -2
DEPDC1-202ENST00000456315 HERC1Q15751 4861 aa2.58□□□□□ -2
DEPDC1-202ENST00000456315 IGLV9-49A0A0B4J1Y8 123 aa2.58□□□□□ -2
DEPDC1-202ENST00000456315 INAFM1C9JVW0 142 aa2.58□□□□□ -2
DEPDC1-202ENST00000456315 NDUFS5O43920 106 aa2.58□□□□□ -2
DEPDC1-202ENST00000456315 H0YAA0 97 aa2.58□□□□□ -2
DEPDC1-202ENST00000456315 Q6ZSA8 131 aa2.58□□□□□ -2
DEPDC1-202ENST00000456315 DMAC1Q96GE9 116 aa2.58□□□□□ -2
DEPDC1-202ENST00000456315 RETNLBQ9BQ08 111 aa2.57□□□□□ -2
DEPDC1-202ENST00000456315 HMCN2Q8NDA2 5059 aa2.57□□□□□ -2
DEPDC1-202ENST00000456315 SPINK6Q6UWN8 80 aa2.57□□□□□ -2
DEPDC1-202ENST00000456315 CMC4P56277 68 aaPredicted RBP2.56□□□□□ -2
DEPDC1-202ENST00000456315 C1orf134Q5TEV5 83 aa2.56□□□□□ -2
DEPDC1-202ENST00000456315 H3BPC8 53 aa2.56□□□□□ -2
DEPDC1-202ENST00000456315 TYMSOSQ8TAI1 123 aa2.55□□□□□ -2
DEPDC1-202ENST00000456315 A0A1B0GVX0 72 aa2.55□□□□□ -2
DEPDC1-202ENST00000456315 ROMO1P60602 79 aa2.55□□□□□ -2
DEPDC1-202ENST00000456315 H3BNG1 76 aa2.55□□□□□ -2
DEPDC1-202ENST00000456315 MRPL34Q9BQ48 92 aaKnown RBP2.55□□□□□ -2
DEPDC1-202ENST00000456315 KRTAP3-1Q9BYR8 98 aa2.55□□□□□ -2
DEPDC1-202ENST00000456315 LINC00304Q8N9R0 145 aa2.54□□□□□ -2
DEPDC1-202ENST00000456315 Q6ZRN7 208 aaPredicted RBP2.53□□□□□ -2
DEPDC1-202ENST00000456315 TNXBP22105 4242 aa2.53□□□□□ -2
DEPDC1-202ENST00000456315 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
DEPDC1-202ENST00000456315 A8MUU9 505 aa2.52□□□□□ -2.01
DEPDC1-202ENST00000456315 PSORS1C2Q9UIG4 136 aa2.52□□□□□ -2.01
DEPDC1-202ENST00000456315 MIR22HGQ0VDD5 57 aa2.51□□□□□ -2.01
DEPDC1-202ENST00000456315 IGLV5-52A0A0A0MRZ9 124 aa2.5□□□□□ -2.01
DEPDC1-202ENST00000456315 Q8N1X5 172 aa2.5□□□□□ -2.01
DEPDC1-202ENST00000456315 IGLV7-43P04211 117 aa2.49□□□□□ -2.01
DEPDC1-202ENST00000456315 KRTAP13-4Q3LI77 160 aa2.49□□□□□ -2.01
DEPDC1-202ENST00000456315 KRTAP13-2Q52LG2 175 aa2.49□□□□□ -2.01
DEPDC1-202ENST00000456315 A0A1B0GU69 56 aa2.49□□□□□ -2.01
DEPDC1-202ENST00000456315 TPRXLQ17RH7 258 aa2.49□□□□□ -2.01
DEPDC1-202ENST00000456315 C10orf95Q9H7T3 257 aa2.49□□□□□ -2.01
DEPDC1-202ENST00000456315 USH2AO75445 5202 aa2.49□□□□□ -2.01
DEPDC1-202ENST00000456315 SPINK1P00995 79 aa2.49□□□□□ -2.01
DEPDC1-202ENST00000456315 TP53AIP1Q9HCN2 124 aa2.48□□□□□ -2.01
DEPDC1-202ENST00000456315 UQCR11O14957 56 aa2.48□□□□□ -2.01
DEPDC1-202ENST00000456315 IGKV2-30P06310 120 aa2.48□□□□□ -2.01
DEPDC1-202ENST00000456315 LINC00483Q53H64 154 aa2.47□□□□□ -2.01
DEPDC1-202ENST00000456315 C14orf177Q52M58 125 aa2.46□□□□□ -2.02
DEPDC1-202ENST00000456315 IGKV2D-30A0A075B6S6 120 aa2.46□□□□□ -2.02
DEPDC1-202ENST00000456315 KRTAP25-1Q3LHN0 102 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms