RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 K7EQZ3 153 aa9.24□□□□□ -0.93
LINC00963-208ENST00000454968 NDUFB1O75438 58 aa9.22□□□□□ -0.93
LINC00963-208ENST00000454968 IGLV7-46A0A075B6I9 117 aa9.21□□□□□ -0.94
LINC00963-208ENST00000454968 Q8N9L7 120 aa9.21□□□□□ -0.94
LINC00963-208ENST00000454968 HMCN2Q8NDA2 5059 aa9.19□□□□□ -0.94
LINC00963-208ENST00000454968 MT-ATP8P03928 68 aa9.19□□□□□ -0.94
LINC00963-208ENST00000454968 C8orf87E5RJ46 101 aa9.18□□□□□ -0.94
LINC00963-208ENST00000454968 KRTAP13-3Q3SY46 172 aa9.18□□□□□ -0.94
LINC00963-208ENST00000454968 IMUPQ9GZP8 106 aa9.18□□□□□ -0.94
LINC00963-208ENST00000454968 TPRXLQ17RH7 258 aa9.17□□□□□ -0.94
LINC00963-208ENST00000454968 NOTCH2NLQ7Z3S9 236 aa9.17□□□□□ -0.94
LINC00963-208ENST00000454968 IGHV6-1A0A0B4J1U7 121 aa9.16□□□□□ -0.94
LINC00963-208ENST00000454968 PRR4Q16378 134 aa9.16□□□□□ -0.94
LINC00963-208ENST00000454968 MMP24-AS1A0A0U1RRL7 71 aa9.15□□□□□ -0.94
LINC00963-208ENST00000454968 C8orf17Q9NRJ1 99 aa9.15□□□□□ -0.94
LINC00963-208ENST00000454968 KRTAP16-1A8MUX0 517 aa9.14□□□□□ -0.95
LINC00963-208ENST00000454968 LINC00313P59037 77 aa9.14□□□□□ -0.95
LINC00963-208ENST00000454968 LPAP08519 4548 aa9.13□□□□□ -0.95
LINC00963-208ENST00000454968 HIST1H4AP62805 103 aaKnown RBP9.1□□□□□ -0.95
LINC00963-208ENST00000454968 HCG22E2RYF7 251 aa9.09□□□□□ -0.95
LINC00963-208ENST00000454968 A0A087WVE0 104 aa9.08□□□□□ -0.96
LINC00963-208ENST00000454968 LRP2P98164 4655 aa9.08□□□□□ -0.96
LINC00963-208ENST00000454968 TMEM254Q8TBM7 123 aa9.07□□□□□ -0.96
LINC00963-208ENST00000454968 hDV103S1A0JD37 113 aa9.06□□□□□ -0.96
LINC00963-208ENST00000454968 C9orf92A6NGG3 77 aa9.06□□□□□ -0.96
LINC00963-208ENST00000454968 Q8N9P0 234 aaPredicted RBP9.05□□□□□ -0.96
LINC00963-208ENST00000454968 CASC2Q6XLA1 102 aa9.05□□□□□ -0.96
LINC00963-208ENST00000454968 C20orf166-AS1Q96NR2 134 aa9.05□□□□□ -0.96
LINC00963-208ENST00000454968 XP32Q5T750 250 aa9.04□□□□□ -0.96
LINC00963-208ENST00000454968 MRPL34Q9BQ48 92 aaKnown RBP9.04□□□□□ -0.96
LINC00963-208ENST00000454968 A8MUU9 505 aa9.03□□□□□ -0.96
LINC00963-208ENST00000454968 WFDC13Q8IUB5 93 aa9.02□□□□□ -0.97
LINC00963-208ENST00000454968 Q75L30 129 aa9□□□□□ -0.97
LINC00963-208ENST00000454968 RPL37P61927 97 aaKnown RBP8.96□□□□□ -0.98
LINC00963-208ENST00000454968 FAM236AA0A1B0GUQ0 79 aa8.94□□□□□ -0.98
LINC00963-208ENST00000454968 FAM236BA0A1B0GV22 79 aa8.94□□□□□ -0.98
LINC00963-208ENST00000454968 MUC17Q685J3 4493 aa8.93□□□□□ -0.98
LINC00963-208ENST00000454968 OCR1Q9BZK8 76 aa8.91□□□□□ -0.98
LINC00963-208ENST00000454968 TP53AIP1Q9HCN2 124 aa8.89□□□□□ -0.99
LINC00963-208ENST00000454968 SCGB1A1P11684 91 aa8.86□□□□□ -0.99
LINC00963-208ENST00000454968 ATOX1O00244 68 aa8.85□□□□□ -0.99
LINC00963-208ENST00000454968 NDUFS5O43920 106 aa8.85□□□□□ -0.99
LINC00963-208ENST00000454968 ZCCHC13Q8WW36 166 aaKnown RBP8.85□□□□□ -0.99
LINC00963-208ENST00000454968 UQCRQO14949 82 aa8.83□□□□□ -1
LINC00963-208ENST00000454968 Q5W150 140 aa8.83□□□□□ -1
LINC00963-208ENST00000454968 SMIM20Q8N5G0 67 aa8.82□□□□□ -1
LINC00963-208ENST00000454968 SEC61BP60468 96 aaKnown RBP8.8□□□□□ -1
LINC00963-208ENST00000454968 ATP11AUNQ6ZP68 121 aa8.8□□□□□ -1
LINC00963-208ENST00000454968 TRAV7A0A075B6U4 112 aa8.79□□□□□ -1
LINC00963-208ENST00000454968 PCOTHQ58A44 107 aa8.78□□□□□ -1
LINC00963-208ENST00000454968 TRAV22A0A0B4J277 110 aa8.76□□□□□ -1.01
LINC00963-208ENST00000454968 UBR4Q5T4S7 5183 aa8.76□□□□□ -1.01
LINC00963-208ENST00000454968 C5orf47Q569G3 176 aa8.74□□□□□ -1.01
LINC00963-208ENST00000454968 SERP2Q8N6R1 65 aa8.73□□□□□ -1.01
LINC00963-208ENST00000454968 H0Y9P7 68 aa8.7□□□□□ -1.02
LINC00963-208ENST00000454968 H3BPC8 53 aa8.68□□□□□ -1.02
LINC00963-208ENST00000454968 IGKV2-30P06310 120 aa8.68□□□□□ -1.02
LINC00963-208ENST00000454968 KRTAP4-1Q9BYQ7 146 aa8.67□□□□□ -1.02
LINC00963-208ENST00000454968 LCE2DQ5TA82 110 aaPredicted RBP8.66□□□□□ -1.02
LINC00963-208ENST00000454968 COX7CP15954 63 aa8.65□□□□□ -1.02
LINC00963-208ENST00000454968 MP68P56378 58 aa8.65□□□□□ -1.02
LINC00963-208ENST00000454968 MUC2Q02817 5179 aa8.65□□□□□ -1.03
LINC00963-208ENST00000454968 LOC101927531A0A1B0GV80 90 aa8.64□□□□□ -1.03
LINC00963-208ENST00000454968 SPINK7P58062 85 aa8.64□□□□□ -1.03
LINC00963-208ENST00000454968 RNF213Q63HN8 5207 aa8.64□□□□□ -1.03
LINC00963-208ENST00000454968 ANAPC13Q9BS18 74 aa8.63□□□□□ -1.03
LINC00963-208ENST00000454968 C7orf65Q6ZTY9 151 aa8.63□□□□□ -1.03
LINC00963-208ENST00000454968 A0A0U1RQV1 116 aa8.62□□□□□ -1.03
LINC00963-208ENST00000454968 C1orf64Q8NEQ6 169 aa8.62□□□□□ -1.03
LINC00963-208ENST00000454968 LINC00208Q96KT6 92 aa8.62□□□□□ -1.03
LINC00963-208ENST00000454968 CYP4F30PQ9H0H9 118 aa8.62□□□□□ -1.03
LINC00963-208ENST00000454968 IGKV2D-30A0A075B6S6 120 aa8.58□□□□□ -1.04
LINC00963-208ENST00000454968 KLKP1Q107X0 134 aa8.57□□□□□ -1.04
LINC00963-208ENST00000454968 HRES1P13985 223 aa8.56□□□□□ -1.04
LINC00963-208ENST00000454968 MPLKIPQ8TAP9 179 aa8.56□□□□□ -1.04
LINC00963-208ENST00000454968 C20orf197Q8N268 126 aa8.54□□□□□ -1.04
LINC00963-208ENST00000454968 KRTAP3-3Q9BYR6 98 aa8.5□□□□□ -1.05
LINC00963-208ENST00000454968 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
LINC00963-208ENST00000454968 SNURFQ9Y675 71 aa8.5□□□□□ -1.05
LINC00963-208ENST00000454968 KRTAP19-2Q3LHN2 52 aa8.48□□□□□ -1.05
LINC00963-208ENST00000454968 CCDC179H3BU77 68 aa8.47□□□□□ -1.05
LINC00963-208ENST00000454968 CYSTM1Q9H1C7 97 aa8.45□□□□□ -1.06
LINC00963-208ENST00000454968 NDUFC1O43677 76 aa8.42□□□□□ -1.06
LINC00963-208ENST00000454968 C4orf26Q17RF5 130 aa8.41□□□□□ -1.06
LINC00963-208ENST00000454968 H7BZZ5 65 aa8.4□□□□□ -1.06
LINC00963-208ENST00000454968 COX6B2Q6YFQ2 88 aa8.4□□□□□ -1.06
LINC00963-208ENST00000454968 KRTAP3-1Q9BYR8 98 aa8.38□□□□□ -1.07
LINC00963-208ENST00000454968 RBM12B-AS1Q9P1G2 102 aa8.38□□□□□ -1.07
LINC00963-208ENST00000454968 PCP4P48539 62 aa8.37□□□□□ -1.07
LINC00963-208ENST00000454968 SPANXA2-OT1Q8N9U9 137 aa8.37□□□□□ -1.07
LINC00963-208ENST00000454968 FLGP20930 4061 aaPredicted RBP8.37□□□□□ -1.07
LINC00963-208ENST00000454968 LCE2CQ5TA81 110 aa8.36□□□□□ -1.07
LINC00963-208ENST00000454968 FAT4Q6V0I7 4981 aa8.35□□□□□ -1.07
LINC00963-208ENST00000454968 A8MUN3 132 aa8.31□□□□□ -1.08
LINC00963-208ENST00000454968 DMAC1Q96GE9 116 aa8.3□□□□□ -1.08
LINC00963-208ENST00000454968 H1FX-AS1Q4G0G2 97 aa8.26□□□□□ -1.09
LINC00963-208ENST00000454968 FAM236DA0A1B0GTK5 79 aa8.24□□□□□ -1.09
LINC00963-208ENST00000454968 FAM236CP0DP71 79 aa8.24□□□□□ -1.09
LINC00963-208ENST00000454968 TMEM258P61165 79 aa8.2□□□□□ -1.1
LINC00963-208ENST00000454968 ATP5EP56381 51 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms