RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 PRR26Q8N8Z3 221 aa7.95□□□□□ -1.14
CLK3-203ENST00000454830 KRTAP1-4P0C5Y4 121 aa7.94□□□□□ -1.14
CLK3-203ENST00000454830 PKHD1P08F94 4074 aa7.94□□□□□ -1.14
CLK3-203ENST00000454830 C1orf64Q8NEQ6 169 aa7.94□□□□□ -1.14
CLK3-203ENST00000454830 MRPL34Q9BQ48 92 aaKnown RBP7.94□□□□□ -1.14
CLK3-203ENST00000454830 TRAV22A0A0B4J277 110 aa7.93□□□□□ -1.14
CLK3-203ENST00000454830 LIMD2Q9BT23 127 aa7.91□□□□□ -1.14
CLK3-203ENST00000454830 RETNLBQ9BQ08 111 aa7.91□□□□□ -1.14
CLK3-203ENST00000454830 A0A1B0GVY2 172 aa7.9□□□□□ -1.14
CLK3-203ENST00000454830 PCOTHQ58A44 107 aa7.9□□□□□ -1.14
CLK3-203ENST00000454830 SERP1Q9Y6X1 66 aa7.9□□□□□ -1.14
CLK3-203ENST00000454830 RPS28P62857 69 aaKnown RBP7.9□□□□□ -1.15
CLK3-203ENST00000454830 OXTP01178 125 aa7.89□□□□□ -1.15
CLK3-203ENST00000454830 C1orf195Q5TG92 126 aa7.89□□□□□ -1.15
CLK3-203ENST00000454830 ATP5EP56381 51 aaPredicted RBP7.89□□□□□ -1.15
CLK3-203ENST00000454830 VPS13BQ7Z7G8 4022 aa7.89□□□□□ -1.15
CLK3-203ENST00000454830 LINC00313P59037 77 aa7.88□□□□□ -1.15
CLK3-203ENST00000454830 TP53AIP1Q9HCN2 124 aa7.88□□□□□ -1.15
CLK3-203ENST00000454830 LINC00304Q8N9R0 145 aa7.87□□□□□ -1.15
CLK3-203ENST00000454830 DYNC1H1Q14204 4646 aaKnown RBP7.87□□□□□ -1.15
CLK3-203ENST00000454830 ZCCHC13Q8WW36 166 aaKnown RBP7.86□□□□□ -1.15
CLK3-203ENST00000454830 KMT2CQ8NEZ4 4911 aaKnown RBP7.83□□□□□ -1.16
CLK3-203ENST00000454830 SPINK1P00995 79 aa7.83□□□□□ -1.16
CLK3-203ENST00000454830 C8orf87E5RJ46 101 aa7.83□□□□□ -1.16
CLK3-203ENST00000454830 H3BPC8 53 aa7.82□□□□□ -1.16
CLK3-203ENST00000454830 FAT1Q14517 4588 aa7.82□□□□□ -1.16
CLK3-203ENST00000454830 FAM229AH3BQW9 127 aa7.81□□□□□ -1.16
CLK3-203ENST00000454830 ASB16-AS1Q495Z4 193 aa7.81□□□□□ -1.16
CLK3-203ENST00000454830 FLG2Q5D862 2391 aaPredicted RBP7.8□□□□□ -1.16
CLK3-203ENST00000454830 MPLKIPQ8TAP9 179 aa7.8□□□□□ -1.16
CLK3-203ENST00000454830 RYR2Q92736 4967 aa7.78□□□□□ -1.16
CLK3-203ENST00000454830 Q5W150 140 aa7.76□□□□□ -1.17
CLK3-203ENST00000454830 SMIM26A0A096LP01 95 aa7.76□□□□□ -1.17
CLK3-203ENST00000454830 Q5XG85 94 aa7.76□□□□□ -1.17
CLK3-203ENST00000454830 DMBT1Q9UGM3 2413 aaPredicted RBP7.75□□□□□ -1.17
CLK3-203ENST00000454830 SPAG11AQ6PDA7 123 aa7.75□□□□□ -1.17
CLK3-203ENST00000454830 C4orf26Q17RF5 130 aa7.74□□□□□ -1.17
CLK3-203ENST00000454830 C9orf92A6NGG3 77 aa7.72□□□□□ -1.17
CLK3-203ENST00000454830 Q5VSD8 79 aa7.71□□□□□ -1.18
CLK3-203ENST00000454830 IGKV2D-30A0A075B6S6 120 aa7.7□□□□□ -1.18
CLK3-203ENST00000454830 LOC101927531A0A1B0GV80 90 aa7.7□□□□□ -1.18
CLK3-203ENST00000454830 IGKV2-30P06310 120 aa7.7□□□□□ -1.18
CLK3-203ENST00000454830 KRTAP10-4P60372 401 aaPredicted RBP7.68□□□□□ -1.18
CLK3-203ENST00000454830 APOBP04114 4563 aaKnown RBP7.68□□□□□ -1.18
CLK3-203ENST00000454830 SPANXA2-OT1Q8N9U9 137 aa7.68□□□□□ -1.18
CLK3-203ENST00000454830 CYP4F30PQ9H0H9 118 aa7.68□□□□□ -1.18
CLK3-203ENST00000454830 FP248Q71RG6 208 aaPredicted RBP7.67□□□□□ -1.18
CLK3-203ENST00000454830 Q8N9P0 234 aaPredicted RBP7.67□□□□□ -1.18
CLK3-203ENST00000454830 IGLV7-46A0A075B6I9 117 aa7.64□□□□□ -1.19
CLK3-203ENST00000454830 KRTAP16-1A8MUX0 517 aa7.62□□□□□ -1.19
CLK3-203ENST00000454830 COA5Q86WW8 74 aa7.62□□□□□ -1.19
CLK3-203ENST00000454830 RPS29P62273 56 aaKnown RBP7.61□□□□□ -1.19
CLK3-203ENST00000454830 PSPHP1O15172 72 aa7.59□□□□□ -1.2
CLK3-203ENST00000454830 HRES1P13985 223 aa7.58□□□□□ -1.2
CLK3-203ENST00000454830 V9GYY9 64 aa7.58□□□□□ -1.2
CLK3-203ENST00000454830 SEC61GP60059 68 aa7.58□□□□□ -1.2
CLK3-203ENST00000454830 KRTAP13-3Q3SY46 172 aa7.58□□□□□ -1.2
CLK3-203ENST00000454830 Q8N1X5 172 aa7.58□□□□□ -1.2
CLK3-203ENST00000454830 RYR3Q15413 4870 aa7.57□□□□□ -1.2
CLK3-203ENST00000454830 CHKB-CPT1BH3BT56 60 aa7.55□□□□□ -1.2
CLK3-203ENST00000454830 BRK1Q8WUW1 75 aa7.54□□□□□ -1.2
CLK3-203ENST00000454830 PRO0628Q9UI54 55 aa7.53□□□□□ -1.2
CLK3-203ENST00000454830 LRP1Q07954 4544 aaKnown RBP7.51□□□□□ -1.21
CLK3-203ENST00000454830 KIAA1109Q2LD37 5005 aa7.5□□□□□ -1.21
CLK3-203ENST00000454830 ACYP2P14621 99 aa7.5□□□□□ -1.21
CLK3-203ENST00000454830 C7orf65Q6ZTY9 151 aa7.49□□□□□ -1.21
CLK3-203ENST00000454830 A8MUN3 132 aa7.48□□□□□ -1.21
CLK3-203ENST00000454830 PRR15LQ9BU68 103 aa7.48□□□□□ -1.21
CLK3-203ENST00000454830 KRTAP10-8P60410 259 aa7.45□□□□□ -1.22
CLK3-203ENST00000454830 Q1T7F1 81 aa7.45□□□□□ -1.22
CLK3-203ENST00000454830 HSPG2P98160 4391 aa7.45□□□□□ -1.22
CLK3-203ENST00000454830 KRTAP17-1Q9BYP8 105 aa7.44□□□□□ -1.22
CLK3-203ENST00000454830 RYR1P21817 5038 aa7.43□□□□□ -1.22
CLK3-203ENST00000454830 DMAC1Q96GE9 116 aa7.41□□□□□ -1.22
CLK3-203ENST00000454830 A8MUU9 505 aa7.41□□□□□ -1.22
CLK3-203ENST00000454830 C20orf166-AS1Q96NR2 134 aa7.4□□□□□ -1.22
CLK3-203ENST00000454830 ATP11AUNQ6ZP68 121 aa7.38□□□□□ -1.23
CLK3-203ENST00000454830 SPINK7P58062 85 aa7.37□□□□□ -1.23
CLK3-203ENST00000454830 PKHD1L1Q86WI1 4243 aa7.37□□□□□ -1.23
CLK3-203ENST00000454830 MYCBP2O75592 4640 aa7.36□□□□□ -1.23
CLK3-203ENST00000454830 EPPK1P58107 5090 aaKnown RBP7.35□□□□□ -1.23
CLK3-203ENST00000454830 A6NED7 52 aa7.33□□□□□ -1.24
CLK3-203ENST00000454830 Q5VV11 94 aa7.32□□□□□ -1.24
CLK3-203ENST00000454830 Q75L30 129 aa7.32□□□□□ -1.24
CLK3-203ENST00000454830 MT1HL1P0DM35 61 aa7.3□□□□□ -1.24
CLK3-203ENST00000454830 KRTAP4-5Q9BYR2 181 aa7.29□□□□□ -1.24
CLK3-203ENST00000454830 LINC01558Q9Y6Z2 57 aa7.29□□□□□ -1.24
CLK3-203ENST00000454830 TNXBP22105 4242 aa7.26□□□□□ -1.25
CLK3-203ENST00000454830 XP32Q5T750 250 aa7.25□□□□□ -1.25
CLK3-203ENST00000454830 FAT3Q8TDW7 4589 aa7.25□□□□□ -1.25
CLK3-203ENST00000454830 A0A1B0GU69 56 aa7.25□□□□□ -1.25
CLK3-203ENST00000454830 PMAIP1Q13794 54 aa7.25□□□□□ -1.25
CLK3-203ENST00000454830 J3QL48 77 aa7.23□□□□□ -1.25
CLK3-203ENST00000454830 RPL37P61927 97 aaKnown RBP7.23□□□□□ -1.25
CLK3-203ENST00000454830 SPTSSBQ8NFR3 76 aa7.21□□□□□ -1.25
CLK3-203ENST00000454830 A8MU10 97 aa7.2□□□□□ -1.26
CLK3-203ENST00000454830 COX6B2Q6YFQ2 88 aa7.15□□□□□ -1.26
CLK3-203ENST00000454830 KRTAP3-1Q9BYR8 98 aa7.14□□□□□ -1.27
CLK3-203ENST00000454830 LCA10Q71F78 164 aa7.1□□□□□ -1.27
CLK3-203ENST00000454830 TPRXLQ17RH7 258 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms