RNA–Protein interactions for RNA: ENST00000454664.2

CNKSR3-203, Transcript of CNKSR family member 3, humanhuman

TSL 5

Gene CNKSR3, Length 776 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-203ENST00000454664 USP34Q70CQ2 3546 aa1.92□□□□□ -2.1
CNKSR3-203ENST00000454664 KRTAP10-10P60014 251 aa1.92□□□□□ -2.1
CNKSR3-203ENST00000454664 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
CNKSR3-203ENST00000454664 FRYQ5TBA9 3013 aa1.92□□□□□ -2.1
CNKSR3-203ENST00000454664 LAMA2P24043 3122 aaKnown RBP1.92□□□□□ -2.1
CNKSR3-203ENST00000454664 ROS1P08922 2347 aa1.91□□□□□ -2.1
CNKSR3-203ENST00000454664 C5orf42Q9H799 3197 aa1.91□□□□□ -2.1
CNKSR3-203ENST00000454664 COL12A1Q99715 3063 aa1.91□□□□□ -2.1
CNKSR3-203ENST00000454664 LRBAP50851 2863 aa1.91□□□□□ -2.1
CNKSR3-203ENST00000454664 RP1L1Q8IWN7 2480 aaPredicted RBP1.9□□□□□ -2.11
CNKSR3-203ENST00000454664 M0QZ58 72 aa1.9□□□□□ -2.11
CNKSR3-203ENST00000454664 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.11
CNKSR3-203ENST00000454664 MUC6Q6W4X9 2439 aa1.9□□□□□ -2.11
CNKSR3-203ENST00000454664 TRANK1O15050 2925 aa1.9□□□□□ -2.11
CNKSR3-203ENST00000454664 DNAH12Q6ZR08 3092 aa1.89□□□□□ -2.11
CNKSR3-203ENST00000454664 CHD9Q3L8U1 2897 aa1.89□□□□□ -2.11
CNKSR3-203ENST00000454664 PRRC2CQ9Y520 2896 aaKnown RBP1.89□□□□□ -2.11
CNKSR3-203ENST00000454664 ABCA2Q9BZC7 2435 aa1.89□□□□□ -2.11
CNKSR3-203ENST00000454664 CELSR1Q9NYQ6 3014 aa1.89□□□□□ -2.11
CNKSR3-203ENST00000454664 SPART-AS1P0CW21 52 aa1.89□□□□□ -2.11
CNKSR3-203ENST00000454664 JMJD1CQ15652 2540 aa1.89□□□□□ -2.11
CNKSR3-203ENST00000454664 NCOR2Q9Y618 2525 aa1.89□□□□□ -2.11
CNKSR3-203ENST00000454664 AKAP9Q99996 3911 aa1.88□□□□□ -2.11
CNKSR3-203ENST00000454664 DMXL1Q9Y485 3027 aa1.88□□□□□ -2.11
CNKSR3-203ENST00000454664 F8P00451 2351 aa1.87□□□□□ -2.11
CNKSR3-203ENST00000454664 CELSR3Q9NYQ7 3312 aa1.87□□□□□ -2.11
CNKSR3-203ENST00000454664 NBPF19A0A087WUL8 3843 aa1.87□□□□□ -2.11
CNKSR3-203ENST00000454664 ZFHX4Q86UP3 3567 aa1.86□□□□□ -2.11
CNKSR3-203ENST00000454664 CCDC168Q8NDH2 2452 aa1.86□□□□□ -2.11
CNKSR3-203ENST00000454664 FREM2Q5SZK8 3169 aa1.86□□□□□ -2.11
CNKSR3-203ENST00000454664 NF1P21359 2839 aa1.85□□□□□ -2.11
CNKSR3-203ENST00000454664 MEGF8Q7Z7M0 2845 aa1.85□□□□□ -2.11
CNKSR3-203ENST00000454664 LAMA1P25391 3075 aa1.85□□□□□ -2.11
CNKSR3-203ENST00000454664 COL6A5A8TX70 2615 aa1.85□□□□□ -2.11
CNKSR3-203ENST00000454664 SPG11Q96JI7 2443 aa1.85□□□□□ -2.11
CNKSR3-203ENST00000454664 SRRM2Q9UQ35 2752 aaKnown RBP1.84□□□□□ -2.11
CNKSR3-203ENST00000454664 DNAH14Q0VDD8 3507 aa1.84□□□□□ -2.11
CNKSR3-203ENST00000454664 EP400Q96L91 3159 aa1.84□□□□□ -2.12
CNKSR3-203ENST00000454664 NBASA2RRP1 2371 aa1.84□□□□□ -2.12
CNKSR3-203ENST00000454664 HIVEP3Q5T1R4 2406 aa1.83□□□□□ -2.12
CNKSR3-203ENST00000454664 CREBBPQ92793 2442 aa1.83□□□□□ -2.12
CNKSR3-203ENST00000454664 RELNP78509 3460 aa1.83□□□□□ -2.12
CNKSR3-203ENST00000454664 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
CNKSR3-203ENST00000454664 ATMQ13315 3056 aa1.82□□□□□ -2.12
CNKSR3-203ENST00000454664 RIF1Q5UIP0 2472 aaKnown RBP1.82□□□□□ -2.12
CNKSR3-203ENST00000454664 NAV2Q8IVL1 2488 aa1.82□□□□□ -2.12
CNKSR3-203ENST00000454664 DNAH11Q96DT5 4516 aa1.82□□□□□ -2.12
CNKSR3-203ENST00000454664 DMXL2Q8TDJ6 3036 aa1.82□□□□□ -2.12
CNKSR3-203ENST00000454664 HTN3P15516 51 aa1.82□□□□□ -2.12
CNKSR3-203ENST00000454664 ANKHD1Q8IWZ3 2542 aaKnown RBP1.82□□□□□ -2.12
CNKSR3-203ENST00000454664 LOC400499M0QZD8 3231 aa1.81□□□□□ -2.12
CNKSR3-203ENST00000454664 KRTAP6-3Q3LI67 103 aa1.81□□□□□ -2.12
CNKSR3-203ENST00000454664 CSMD1Q96PZ7 3565 aa1.8□□□□□ -2.12
CNKSR3-203ENST00000454664 MYCBP2O75592 4640 aa1.8□□□□□ -2.12
CNKSR3-203ENST00000454664 LAMA3Q16787 3333 aa1.8□□□□□ -2.12
CNKSR3-203ENST00000454664 WDFY3Q8IZQ1 3526 aa1.79□□□□□ -2.12
CNKSR3-203ENST00000454664 SPENQ96T58 3664 aaKnown RBP1.79□□□□□ -2.12
CNKSR3-203ENST00000454664 DEFB4AO15263 64 aa1.79□□□□□ -2.12
CNKSR3-203ENST00000454664 DEFB135Q30KP9 77 aa1.79□□□□□ -2.12
CNKSR3-203ENST00000454664 CEP290O15078 2479 aa1.79□□□□□ -2.12
CNKSR3-203ENST00000454664 LAMA5O15230 3695 aa1.78□□□□□ -2.12
CNKSR3-203ENST00000454664 APCP25054 2843 aa1.78□□□□□ -2.12
CNKSR3-203ENST00000454664 PTPN13Q12923 2485 aa1.78□□□□□ -2.12
CNKSR3-203ENST00000454664 TACC2O95359 2948 aa1.78□□□□□ -2.12
CNKSR3-203ENST00000454664 SETD2Q9BYW2 2564 aaPredicted RBP1.77□□□□□ -2.13
CNKSR3-203ENST00000454664 DNAH1Q9P2D7 4330 aa1.76□□□□□ -2.13
CNKSR3-203ENST00000454664 NIPBLQ6KC79 2804 aaeCLIP1.76□□□□□ -2.13
CNKSR3-203ENST00000454664 RPS29P62273 56 aaKnown RBP1.75□□□□□ -2.13
CNKSR3-203ENST00000454664 VCANP13611 3396 aa1.75□□□□□ -2.13
CNKSR3-203ENST00000454664 PKD1L2Q7Z442 2459 aa1.75□□□□□ -2.13
CNKSR3-203ENST00000454664 DMBT1Q9UGM3 2413 aaPredicted RBP1.75□□□□□ -2.13
CNKSR3-203ENST00000454664 FRAS1Q86XX4 4008 aa1.74□□□□□ -2.13
CNKSR3-203ENST00000454664 TTC28Q96AY4 2481 aa1.74□□□□□ -2.13
CNKSR3-203ENST00000454664 DCHS2Q6V1P9 2916 aa1.74□□□□□ -2.13
CNKSR3-203ENST00000454664 DNAH8Q96JB1 4490 aa1.74□□□□□ -2.13
CNKSR3-203ENST00000454664 TEX15Q9BXT5 2789 aa1.74□□□□□ -2.13
CNKSR3-203ENST00000454664 J3QKU1 62 aa1.73□□□□□ -2.13
CNKSR3-203ENST00000454664 SONP18583 2426 aaKnown RBP1.73□□□□□ -2.13
CNKSR3-203ENST00000454664 ASPMQ8IZT6 3477 aa1.73□□□□□ -2.13
CNKSR3-203ENST00000454664 TLN1Q9Y490 2541 aaKnown RBP1.73□□□□□ -2.13
CNKSR3-203ENST00000454664 ITPR3Q14573 2671 aa1.73□□□□□ -2.13
CNKSR3-203ENST00000454664 BSNQ9UPA5 3926 aa1.72□□□□□ -2.13
CNKSR3-203ENST00000454664 BRCA2P51587 3418 aa1.72□□□□□ -2.13
CNKSR3-203ENST00000454664 CDH23Q9H251 3354 aa1.72□□□□□ -2.13
CNKSR3-203ENST00000454664 COL7A1Q02388 2944 aa1.71□□□□□ -2.14
CNKSR3-203ENST00000454664 SETXQ7Z333 2677 aaKnown RBP1.71□□□□□ -2.14
CNKSR3-203ENST00000454664 SMG1Q96Q15 3661 aaKnown RBP1.71□□□□□ -2.14
CNKSR3-203ENST00000454664 MUC3AQ02505 3323 aa1.69□□□□□ -2.14
CNKSR3-203ENST00000454664 SPTAN1Q13813 2472 aaKnown RBP1.69□□□□□ -2.14
CNKSR3-203ENST00000454664 USP9XQ93008 2570 aaPredicted RBP1.69□□□□□ -2.14
CNKSR3-203ENST00000454664 USP9YO00507 2555 aaPredicted RBP1.69□□□□□ -2.14
CNKSR3-203ENST00000454664 HECTD1Q9ULT8 2610 aa1.69□□□□□ -2.14
CNKSR3-203ENST00000454664 ANK3Q12955 4377 aaKnown RBP1.68□□□□□ -2.14
CNKSR3-203ENST00000454664 TLN2Q9Y4G6 2542 aa1.68□□□□□ -2.14
CNKSR3-203ENST00000454664 CSMD3Q7Z407 3707 aa1.68□□□□□ -2.14
CNKSR3-203ENST00000454664 TNP1P09430 55 aa1.68□□□□□ -2.14
CNKSR3-203ENST00000454664 SMR3AQ99954 134 aa1.68□□□□□ -2.14
CNKSR3-203ENST00000454664 TENM4Q6N022 2769 aa1.68□□□□□ -2.14
CNKSR3-203ENST00000454664 LRRK2Q5S007 2527 aa1.68□□□□□ -2.14
CNKSR3-203ENST00000454664 TRRAPQ9Y4A5 3859 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 368.8 ms