RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 PDZD2O15018 2839 aa6.4□□□□□ -1.38
SHANK2-211ENST00000449833 COL12A1Q99715 3063 aa6.4□□□□□ -1.38
SHANK2-211ENST00000449833 NF1P21359 2839 aa6.36□□□□□ -1.39
SHANK2-211ENST00000449833 Q6ZRN7 208 aaPredicted RBP6.35□□□□□ -1.39
SHANK2-211ENST00000449833 TACC2O95359 2948 aa6.35□□□□□ -1.39
SHANK2-211ENST00000449833 HIVEP1P15822 2718 aa6.34□□□□□ -1.39
SHANK2-211ENST00000449833 DMXL2Q8TDJ6 3036 aa6.33□□□□□ -1.4
SHANK2-211ENST00000449833 INE1O15225 51 aa6.33□□□□□ -1.4
SHANK2-211ENST00000449833 CRYBG3Q68DQ2 2970 aa6.33□□□□□ -1.4
SHANK2-211ENST00000449833 TENM1Q9UKZ4 2725 aa6.3□□□□□ -1.4
SHANK2-211ENST00000449833 NIPBLQ6KC79 2804 aaeCLIP6.3□□□□□ -1.4
SHANK2-211ENST00000449833 KRTAP13-1Q8IUC0 172 aa6.28□□□□□ -1.4
SHANK2-211ENST00000449833 KRTAP13-2Q52LG2 175 aa6.28□□□□□ -1.4
SHANK2-211ENST00000449833 USP34Q70CQ2 3546 aa6.27□□□□□ -1.41
SHANK2-211ENST00000449833 ZFHX3Q15911 3703 aa6.27□□□□□ -1.41
SHANK2-211ENST00000449833 LAMA1P25391 3075 aa6.27□□□□□ -1.41
SHANK2-211ENST00000449833 NBEAQ8NFP9 2946 aa6.27□□□□□ -1.41
SHANK2-211ENST00000449833 COL6A3P12111 3177 aa6.25□□□□□ -1.41
SHANK2-211ENST00000449833 LAMA3Q16787 3333 aa6.25□□□□□ -1.41
SHANK2-211ENST00000449833 BRCA2P51587 3418 aa6.25□□□□□ -1.41
SHANK2-211ENST00000449833 KRTAP10-8P60410 259 aa6.24□□□□□ -1.41
SHANK2-211ENST00000449833 CELSR2Q9HCU4 2923 aa6.23□□□□□ -1.41
SHANK2-211ENST00000449833 KRTAP7-1Q8IUC3 87 aa6.21□□□□□ -1.41
SHANK2-211ENST00000449833 FLNCQ14315 2725 aa6.21□□□□□ -1.42
SHANK2-211ENST00000449833 HTTP42858 3142 aa6.2□□□□□ -1.42
SHANK2-211ENST00000449833 BOD1L1Q8NFC6 3051 aa6.19□□□□□ -1.42
SHANK2-211ENST00000449833 ZZEF1O43149 2961 aa6.18□□□□□ -1.42
SHANK2-211ENST00000449833 DMXL1Q9Y485 3027 aa6.16□□□□□ -1.42
SHANK2-211ENST00000449833 CDH23Q9H251 3354 aa6.15□□□□□ -1.42
SHANK2-211ENST00000449833 DCHS2Q6V1P9 2916 aa6.14□□□□□ -1.43
SHANK2-211ENST00000449833 PRO2289Q9P1D8 64 aa6.14□□□□□ -1.43
SHANK2-211ENST00000449833 ATMQ13315 3056 aa6.14□□□□□ -1.43
SHANK2-211ENST00000449833 CFAP47Q6ZTR5 3102 aa6.12□□□□□ -1.43
SHANK2-211ENST00000449833 VCANP13611 3396 aa6.11□□□□□ -1.43
SHANK2-211ENST00000449833 TNRC18O15417 2968 aaPredicted RBP6.11□□□□□ -1.43
SHANK2-211ENST00000449833 SPEGQ15772 3267 aa6.1□□□□□ -1.43
SHANK2-211ENST00000449833 ADGRG4Q8IZF6 3080 aa6.08□□□□□ -1.44
SHANK2-211ENST00000449833 CELSR1Q9NYQ6 3014 aa6.02□□□□□ -1.45
SHANK2-211ENST00000449833 XP32Q5T750 250 aa6.02□□□□□ -1.45
SHANK2-211ENST00000449833 KRTAP13-4Q3LI77 160 aa6.01□□□□□ -1.45
SHANK2-211ENST00000449833 SZT2Q5T011 3432 aa5.97□□□□□ -1.45
SHANK2-211ENST00000449833 A0A1B0GVY2 172 aa5.96□□□□□ -1.45
SHANK2-211ENST00000449833 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
SHANK2-211ENST00000449833 TENM2Q9NT68 2774 aa5.94□□□□□ -1.46
SHANK2-211ENST00000449833 TPRXLQ17RH7 258 aa5.93□□□□□ -1.46
SHANK2-211ENST00000449833 FBN2P35556 2912 aa5.92□□□□□ -1.46
SHANK2-211ENST00000449833 KRTAP10-10P60014 251 aa5.92□□□□□ -1.46
SHANK2-211ENST00000449833 TENM4Q6N022 2769 aa5.91□□□□□ -1.46
SHANK2-211ENST00000449833 WDFY3Q8IZQ1 3526 aa5.91□□□□□ -1.46
SHANK2-211ENST00000449833 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
SHANK2-211ENST00000449833 KRTAP12-2P59991 146 aa5.89□□□□□ -1.47
SHANK2-211ENST00000449833 ZANQ9Y493 2812 aa5.88□□□□□ -1.47
SHANK2-211ENST00000449833 KRTAP1-4P0C5Y4 121 aa5.87□□□□□ -1.47
SHANK2-211ENST00000449833 SPTBN5Q9NRC6 3674 aaKnown RBP5.86□□□□□ -1.47
SHANK2-211ENST00000449833 MXRA5Q9NR99 2828 aa5.85□□□□□ -1.47
SHANK2-211ENST00000449833 ZFHX4Q86UP3 3567 aa5.8□□□□□ -1.48
SHANK2-211ENST00000449833 HRNRQ86YZ3 2850 aaPredicted RBP5.79□□□□□ -1.48
SHANK2-211ENST00000449833 KRTAP13-3Q3SY46 172 aa5.79□□□□□ -1.48
SHANK2-211ENST00000449833 PKD1L1Q8TDX9 2849 aa5.79□□□□□ -1.48
SHANK2-211ENST00000449833 NBPF19A0A087WUL8 3843 aa5.77□□□□□ -1.49
SHANK2-211ENST00000449833 VWFP04275 2813 aa5.77□□□□□ -1.49
SHANK2-211ENST00000449833 KRTAP12-1P59990 96 aa5.77□□□□□ -1.49
SHANK2-211ENST00000449833 LOC400499M0QZD8 3231 aa5.76□□□□□ -1.49
SHANK2-211ENST00000449833 EYSQ5T1H1 3165 aa5.75□□□□□ -1.49
SHANK2-211ENST00000449833 LAMA5O15230 3695 aa5.74□□□□□ -1.49
SHANK2-211ENST00000449833 COL7A1Q02388 2944 aa5.74□□□□□ -1.49
SHANK2-211ENST00000449833 ASPMQ8IZT6 3477 aa5.73□□□□□ -1.49
SHANK2-211ENST00000449833 OTOGQ6ZRI0 2925 aa5.71□□□□□ -1.49
SHANK2-211ENST00000449833 MYO15AQ9UKN7 3530 aa5.68□□□□□ -1.5
SHANK2-211ENST00000449833 DCHS1Q96JQ0 3298 aa5.68□□□□□ -1.5
SHANK2-211ENST00000449833 MEGF8Q7Z7M0 2845 aa5.64□□□□□ -1.51
SHANK2-211ENST00000449833 KRTAP21-3Q3LHN1 58 aa5.63□□□□□ -1.51
SHANK2-211ENST00000449833 CSMD1Q96PZ7 3565 aa5.61□□□□□ -1.51
SHANK2-211ENST00000449833 SMG1Q96Q15 3661 aaKnown RBP5.59□□□□□ -1.52
SHANK2-211ENST00000449833 SPENQ96T58 3664 aaKnown RBP5.58□□□□□ -1.52
SHANK2-211ENST00000449833 RELNP78509 3460 aa5.54□□□□□ -1.52
SHANK2-211ENST00000449833 DMDP11532 3685 aa5.54□□□□□ -1.52
SHANK2-211ENST00000449833 FBN3Q75N90 2809 aa5.38□□□□□ -1.55
SHANK2-211ENST00000449833 ALMS1Q8TCU4 4167 aa5.37□□□□□ -1.55
SHANK2-211ENST00000449833 KRTAP10-6P60371 365 aaPredicted RBP5.36□□□□□ -1.55
SHANK2-211ENST00000449833 KRTAP3-1Q9BYR8 98 aa5.35□□□□□ -1.55
SHANK2-211ENST00000449833 VPS13CQ709C8 3753 aa5.33□□□□□ -1.56
SHANK2-211ENST00000449833 AKAP9Q99996 3911 aa5.29□□□□□ -1.56
SHANK2-211ENST00000449833 FBN1P35555 2871 aaKnown RBP5.28□□□□□ -1.56
SHANK2-211ENST00000449833 KRTAP10-12P60413 245 aa5.27□□□□□ -1.57
SHANK2-211ENST00000449833 SVEP1Q4LDE5 3571 aa5.25□□□□□ -1.57
SHANK2-211ENST00000449833 CUBNO60494 3623 aa5.24□□□□□ -1.57
SHANK2-211ENST00000449833 TRRAPQ9Y4A5 3859 aa5.23□□□□□ -1.57
SHANK2-211ENST00000449833 CRCT1Q9UGL9 99 aa5.18□□□□□ -1.58
SHANK2-211ENST00000449833 CSMD3Q7Z407 3707 aa5.13□□□□□ -1.59
SHANK2-211ENST00000449833 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
SHANK2-211ENST00000449833 MUC3AQ02505 3323 aa5.1□□□□□ -1.59
SHANK2-211ENST00000449833 KRTAP3-2Q9BYR7 98 aa5.06□□□□□ -1.6
SHANK2-211ENST00000449833 KRTAP3-3Q9BYR6 98 aa5.03□□□□□ -1.6
SHANK2-211ENST00000449833 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
SHANK2-211ENST00000449833 CSMD2Q7Z408 3487 aa4.97□□□□□ -1.61
SHANK2-211ENST00000449833 BSNQ9UPA5 3926 aa4.97□□□□□ -1.61
SHANK2-211ENST00000449833 KRTAP10-5P60370 271 aa4.95□□□□□ -1.62
SHANK2-211ENST00000449833 CMYA5Q8N3K9 4069 aa4.9□□□□□ -1.63
SHANK2-211ENST00000449833 DNAH3Q8TD57 4116 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms