RNA–Protein interactions for RNA: ENST00000448775.3

CLMP-201, Transcript of CXADR like membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLMP, Length 5,072 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMP-201ENST00000448775 KRTAP25-1Q3LHN0 102 aa10.55□□□□□ -0.72
CLMP-201ENST00000448775 APCP25054 2843 aa10.54□□□□□ -0.72
CLMP-201ENST00000448775 KRTAP7-1Q8IUC3 87 aa10.53□□□□□ -0.72
CLMP-201ENST00000448775 CELSR2Q9HCU4 2923 aa10.53□□□□□ -0.72
CLMP-201ENST00000448775 NIPBLQ6KC79 2804 aaeCLIP10.51□□□□□ -0.73
CLMP-201ENST00000448775 LOC400499M0QZD8 3231 aa10.49□□□□□ -0.73
CLMP-201ENST00000448775 KRTAP11-1Q8IUC1 163 aa10.47□□□□□ -0.73
CLMP-201ENST00000448775 R4GN34 69 aa10.45□□□□□ -0.74
CLMP-201ENST00000448775 KMT2BQ9UMN6 2715 aaPredicted RBP10.44□□□□□ -0.74
CLMP-201ENST00000448775 USP34Q70CQ2 3546 aa10.43□□□□□ -0.74
CLMP-201ENST00000448775 KRTAP16-1A8MUX0 517 aa10.4□□□□□ -0.74
CLMP-201ENST00000448775 DCHS2Q6V1P9 2916 aa10.38□□□□□ -0.75
CLMP-201ENST00000448775 HRNRQ86YZ3 2850 aaPredicted RBP10.34□□□□□ -0.75
CLMP-201ENST00000448775 KRTAP13-1Q8IUC0 172 aa10.34□□□□□ -0.75
CLMP-201ENST00000448775 KRTAP10-1P60331 282 aa10.34□□□□□ -0.75
CLMP-201ENST00000448775 KRTAP10-2P60368 255 aa10.34□□□□□ -0.75
CLMP-201ENST00000448775 TENM4Q6N022 2769 aa10.33□□□□□ -0.76
CLMP-201ENST00000448775 NF1P21359 2839 aa10.33□□□□□ -0.76
CLMP-201ENST00000448775 CRYBG3Q68DQ2 2970 aa10.32□□□□□ -0.76
CLMP-201ENST00000448775 M0QZ58 72 aa10.28□□□□□ -0.76
CLMP-201ENST00000448775 FBN2P35556 2912 aa10.27□□□□□ -0.76
CLMP-201ENST00000448775 MYO15AQ9UKN7 3530 aa10.27□□□□□ -0.77
CLMP-201ENST00000448775 NDUFAF8A1L188 74 aa10.22□□□□□ -0.77
CLMP-201ENST00000448775 Q6ZRN7 208 aaPredicted RBP10.21□□□□□ -0.78
CLMP-201ENST00000448775 RPS29P62273 56 aaKnown RBP10.18□□□□□ -0.78
CLMP-201ENST00000448775 A8MUU9 505 aa10.13□□□□□ -0.79
CLMP-201ENST00000448775 KRTAP13-2Q52LG2 175 aa10.13□□□□□ -0.79
CLMP-201ENST00000448775 SEC61BP60468 96 aaKnown RBP10.08□□□□□ -0.8
CLMP-201ENST00000448775 Q5VSD8 79 aa10.08□□□□□ -0.8
CLMP-201ENST00000448775 MXRA5Q9NR99 2828 aa10.03□□□□□ -0.8
CLMP-201ENST00000448775 RELNP78509 3460 aa9.99□□□□□ -0.81
CLMP-201ENST00000448775 M0R2T5 61 aa9.98□□□□□ -0.81
CLMP-201ENST00000448775 DCHS1Q96JQ0 3298 aa9.95□□□□□ -0.82
CLMP-201ENST00000448775 PLAC4Q8WY50 150 aa9.91□□□□□ -0.82
CLMP-201ENST00000448775 WDFY3Q8IZQ1 3526 aa9.9□□□□□ -0.82
CLMP-201ENST00000448775 H0YAA0 97 aa9.87□□□□□ -0.83
CLMP-201ENST00000448775 C20orf166-AS1Q96NR2 134 aa9.86□□□□□ -0.83
CLMP-201ENST00000448775 TENM3Q9P273 2699 aa9.83□□□□□ -0.84
CLMP-201ENST00000448775 CELSR1Q9NYQ6 3014 aa9.82□□□□□ -0.84
CLMP-201ENST00000448775 LAMA5O15230 3695 aa9.78□□□□□ -0.84
CLMP-201ENST00000448775 TENM1Q9UKZ4 2725 aa9.76□□□□□ -0.85
CLMP-201ENST00000448775 C10orf95Q9H7T3 257 aa9.75□□□□□ -0.85
CLMP-201ENST00000448775 MUC3AQ02505 3323 aa9.75□□□□□ -0.85
CLMP-201ENST00000448775 ASPMQ8IZT6 3477 aa9.75□□□□□ -0.85
CLMP-201ENST00000448775 ZFHX4Q86UP3 3567 aa9.67□□□□□ -0.86
CLMP-201ENST00000448775 P0C880 135 aa9.64□□□□□ -0.87
CLMP-201ENST00000448775 KRTAP1-4P0C5Y4 121 aa9.63□□□□□ -0.87
CLMP-201ENST00000448775 KRTAP21-3Q3LHN1 58 aa9.63□□□□□ -0.87
CLMP-201ENST00000448775 PKD1L1Q8TDX9 2849 aa9.62□□□□□ -0.87
CLMP-201ENST00000448775 KRTAP13-3Q3SY46 172 aa9.61□□□□□ -0.87
CLMP-201ENST00000448775 PP632Q6XCG6 107 aa9.61□□□□□ -0.87
CLMP-201ENST00000448775 TNP1P09430 55 aa9.6□□□□□ -0.87
CLMP-201ENST00000448775 DMDP11532 3685 aa9.57□□□□□ -0.88
CLMP-201ENST00000448775 TENM2Q9NT68 2774 aa9.57□□□□□ -0.88
CLMP-201ENST00000448775 PDZD2O15018 2839 aa9.53□□□□□ -0.88
CLMP-201ENST00000448775 FBN1P35555 2871 aaKnown RBP9.51□□□□□ -0.89
CLMP-201ENST00000448775 TGP01266 2768 aa9.47□□□□□ -0.89
CLMP-201ENST00000448775 VWFP04275 2813 aa9.45□□□□□ -0.9
CLMP-201ENST00000448775 OTOGQ6ZRI0 2925 aa9.41□□□□□ -0.9
CLMP-201ENST00000448775 XP32Q5T750 250 aa9.39□□□□□ -0.91
CLMP-201ENST00000448775 CSMD1Q96PZ7 3565 aa9.39□□□□□ -0.91
CLMP-201ENST00000448775 SMG1Q96Q15 3661 aaKnown RBP9.36□□□□□ -0.91
CLMP-201ENST00000448775 KRTAP10-8P60410 259 aa9.34□□□□□ -0.91
CLMP-201ENST00000448775 NBPF19A0A087WUL8 3843 aa9.3□□□□□ -0.92
CLMP-201ENST00000448775 ZFHX3Q15911 3703 aa9.24□□□□□ -0.93
CLMP-201ENST00000448775 SVEP1Q4LDE5 3571 aa9.18□□□□□ -0.94
CLMP-201ENST00000448775 TPRXLQ17RH7 258 aa9.14□□□□□ -0.95
CLMP-201ENST00000448775 CUBNO60494 3623 aa9.13□□□□□ -0.95
CLMP-201ENST00000448775 KRTAP12-2P59991 146 aa9.12□□□□□ -0.95
CLMP-201ENST00000448775 CSMD2Q7Z408 3487 aa9.09□□□□□ -0.95
CLMP-201ENST00000448775 SRRM2Q9UQ35 2752 aaKnown RBP9.09□□□□□ -0.95
CLMP-201ENST00000448775 KRTAP3-1Q9BYR8 98 aa9.01□□□□□ -0.97
CLMP-201ENST00000448775 KRTAP12-1P59990 96 aa9.01□□□□□ -0.97
CLMP-201ENST00000448775 SPENQ96T58 3664 aaKnown RBP9□□□□□ -0.97
CLMP-201ENST00000448775 FBN3Q75N90 2809 aa8.96□□□□□ -0.97
CLMP-201ENST00000448775 A0A1B0GVY2 172 aa8.92□□□□□ -0.98
CLMP-201ENST00000448775 KRTAP13-4Q3LI77 160 aa8.9□□□□□ -0.99
CLMP-201ENST00000448775 ANK3Q12955 4377 aaKnown RBP8.89□□□□□ -0.99
CLMP-201ENST00000448775 TRRAPQ9Y4A5 3859 aa8.86□□□□□ -0.99
CLMP-201ENST00000448775 KRTAP10-6P60371 365 aaPredicted RBP8.83□□□□□ -1
CLMP-201ENST00000448775 BSNQ9UPA5 3926 aa8.76□□□□□ -1.01
CLMP-201ENST00000448775 MEGF8Q7Z7M0 2845 aa8.76□□□□□ -1.01
CLMP-201ENST00000448775 COL7A1Q02388 2944 aa8.75□□□□□ -1.01
CLMP-201ENST00000448775 KRTAP15-1Q3LI76 137 aa8.72□□□□□ -1.01
CLMP-201ENST00000448775 KRTAP10-10P60014 251 aa8.67□□□□□ -1.02
CLMP-201ENST00000448775 PRO2289Q9P1D8 64 aa8.61□□□□□ -1.03
CLMP-201ENST00000448775 KRTAP3-2Q9BYR7 98 aa8.52□□□□□ -1.05
CLMP-201ENST00000448775 KRTAP3-3Q9BYR6 98 aa8.44□□□□□ -1.06
CLMP-201ENST00000448775 VPS13CQ709C8 3753 aa8.41□□□□□ -1.06
CLMP-201ENST00000448775 INE1O15225 51 aa8.34□□□□□ -1.07
CLMP-201ENST00000448775 HUWE1Q7Z6Z7 4374 aaKnown RBP8.29□□□□□ -1.08
CLMP-201ENST00000448775 MT1HL1P0DM35 61 aa8.23□□□□□ -1.09
CLMP-201ENST00000448775 ZNF469Q96JG9 3925 aaPredicted RBP8.2□□□□□ -1.1
CLMP-201ENST00000448775 KRTAP10-4P60372 401 aaPredicted RBP8.16□□□□□ -1.1
CLMP-201ENST00000448775 CSMD3Q7Z407 3707 aa8.07□□□□□ -1.12
CLMP-201ENST00000448775 KRTAP23-1A1A580 65 aa8.04□□□□□ -1.12
CLMP-201ENST00000448775 KRTAP4-5Q9BYR2 181 aa7.99□□□□□ -1.13
CLMP-201ENST00000448775 DNAH9Q9NYC9 4486 aa7.96□□□□□ -1.14
CLMP-201ENST00000448775 AKAP9Q99996 3911 aa7.93□□□□□ -1.14
CLMP-201ENST00000448775 KRTAP10-12P60413 245 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms