RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 NDUFB1O75438 58 aa9.62□□□□□ -0.87
SGCE-206ENST00000445866 TPRXLQ17RH7 258 aa9.62□□□□□ -0.87
SGCE-206ENST00000445866 KRTAP13-3Q3SY46 172 aa9.62□□□□□ -0.87
SGCE-206ENST00000445866 IGHV6-1A0A0B4J1U7 121 aa9.6□□□□□ -0.87
SGCE-206ENST00000445866 A8MWP4 228 aa9.59□□□□□ -0.87
SGCE-206ENST00000445866 CDIP1Q9H305 208 aa9.59□□□□□ -0.87
SGCE-206ENST00000445866 DSCR10P59022 87 aa9.58□□□□□ -0.88
SGCE-206ENST00000445866 A0A1B0GVX0 72 aa9.58□□□□□ -0.88
SGCE-206ENST00000445866 LPAP08519 4548 aa9.57□□□□□ -0.88
SGCE-206ENST00000445866 IGKV3D-7A0A0C4DH55 119 aa9.57□□□□□ -0.88
SGCE-206ENST00000445866 LINC00313P59037 77 aa9.56□□□□□ -0.88
SGCE-206ENST00000445866 PRR15Q8IV56 129 aa9.55□□□□□ -0.88
SGCE-206ENST00000445866 NOTCH2NLQ7Z3S9 236 aa9.53□□□□□ -0.88
SGCE-206ENST00000445866 K7EQZ3 153 aa9.52□□□□□ -0.89
SGCE-206ENST00000445866 Q8N9L7 120 aa9.52□□□□□ -0.89
SGCE-206ENST00000445866 CXCL6P80162 114 aa9.51□□□□□ -0.89
SGCE-206ENST00000445866 C8orf87E5RJ46 101 aa9.51□□□□□ -0.89
SGCE-206ENST00000445866 LINC00643Q86TS7 51 aa9.51□□□□□ -0.89
SGCE-206ENST00000445866 LRP2P98164 4655 aa9.5□□□□□ -0.89
SGCE-206ENST00000445866 XP32Q5T750 250 aa9.49□□□□□ -0.89
SGCE-206ENST00000445866 C8orf17Q9NRJ1 99 aa9.48□□□□□ -0.89
SGCE-206ENST00000445866 ATP5EP2Q5VTU8 51 aa9.45□□□□□ -0.9
SGCE-206ENST00000445866 MT-ATP8P03928 68 aa9.44□□□□□ -0.9
SGCE-206ENST00000445866 KRTAP16-1A8MUX0 517 aa9.42□□□□□ -0.9
SGCE-206ENST00000445866 MMP24-AS1A0A0U1RRL7 71 aa9.41□□□□□ -0.9
SGCE-206ENST00000445866 hDV103S1A0JD37 113 aa9.4□□□□□ -0.9
SGCE-206ENST00000445866 HIST1H4AP62805 103 aaKnown RBP9.39□□□□□ -0.91
SGCE-206ENST00000445866 Q75L30 129 aa9.38□□□□□ -0.91
SGCE-206ENST00000445866 WFDC13Q8IUB5 93 aa9.38□□□□□ -0.91
SGCE-206ENST00000445866 C20orf166-AS1Q96NR2 134 aa9.38□□□□□ -0.91
SGCE-206ENST00000445866 RPL37P61927 97 aaKnown RBP9.37□□□□□ -0.91
SGCE-206ENST00000445866 CASC2Q6XLA1 102 aa9.37□□□□□ -0.91
SGCE-206ENST00000445866 A8MUU9 505 aa9.36□□□□□ -0.91
SGCE-206ENST00000445866 HCG22E2RYF7 251 aa9.36□□□□□ -0.91
SGCE-206ENST00000445866 TMEM254Q8TBM7 123 aa9.36□□□□□ -0.91
SGCE-206ENST00000445866 MRPL34Q9BQ48 92 aaKnown RBP9.35□□□□□ -0.91
SGCE-206ENST00000445866 SEC61BP60468 96 aaKnown RBP9.34□□□□□ -0.91
SGCE-206ENST00000445866 ATP11AUNQ6ZP68 121 aa9.32□□□□□ -0.92
SGCE-206ENST00000445866 Q8N9P0 234 aaPredicted RBP9.32□□□□□ -0.92
SGCE-206ENST00000445866 PCOTHQ58A44 107 aa9.31□□□□□ -0.92
SGCE-206ENST00000445866 NDUFS5O43920 106 aa9.3□□□□□ -0.92
SGCE-206ENST00000445866 A0A087WVE0 104 aa9.29□□□□□ -0.92
SGCE-206ENST00000445866 LOC100996750A0A140TA64 210 aa9.29□□□□□ -0.92
SGCE-206ENST00000445866 KRTAP4-6Q9BYQ5 205 aa9.29□□□□□ -0.92
SGCE-206ENST00000445866 IMUPQ9GZP8 106 aa9.29□□□□□ -0.92
SGCE-206ENST00000445866 UBR4Q5T4S7 5183 aa9.29□□□□□ -0.92
SGCE-206ENST00000445866 ANAPC13Q9BS18 74 aa9.25□□□□□ -0.93
SGCE-206ENST00000445866 MUC17Q685J3 4493 aa9.24□□□□□ -0.93
SGCE-206ENST00000445866 LCE2BO14633 110 aa9.21□□□□□ -0.93
SGCE-206ENST00000445866 ZCCHC13Q8WW36 166 aaKnown RBP9.21□□□□□ -0.93
SGCE-206ENST00000445866 TP53AIP1Q9HCN2 124 aa9.16□□□□□ -0.94
SGCE-206ENST00000445866 RNF213Q63HN8 5207 aa9.14□□□□□ -0.95
SGCE-206ENST00000445866 Q5W150 140 aa9.13□□□□□ -0.95
SGCE-206ENST00000445866 KRTAP4-1Q9BYQ7 146 aa9.13□□□□□ -0.95
SGCE-206ENST00000445866 MUC2Q02817 5179 aa9.12□□□□□ -0.95
SGCE-206ENST00000445866 FAM236AA0A1B0GUQ0 79 aa9.08□□□□□ -0.96
SGCE-206ENST00000445866 FAM236BA0A1B0GV22 79 aa9.08□□□□□ -0.96
SGCE-206ENST00000445866 UQCRQO14949 82 aa9.07□□□□□ -0.96
SGCE-206ENST00000445866 SPINK7P58062 85 aa9.05□□□□□ -0.96
SGCE-206ENST00000445866 OCR1Q9BZK8 76 aa9.04□□□□□ -0.96
SGCE-206ENST00000445866 CCDC179H3BU77 68 aa9.03□□□□□ -0.96
SGCE-206ENST00000445866 ATOX1O00244 68 aa9.03□□□□□ -0.96
SGCE-206ENST00000445866 IGKV2D-30A0A075B6S6 120 aa9□□□□□ -0.97
SGCE-206ENST00000445866 IGKV2-30P06310 120 aa9□□□□□ -0.97
SGCE-206ENST00000445866 TRAV22A0A0B4J277 110 aa9□□□□□ -0.97
SGCE-206ENST00000445866 H0Y9P7 68 aa8.97□□□□□ -0.97
SGCE-206ENST00000445866 SMIM20Q8N5G0 67 aa8.97□□□□□ -0.97
SGCE-206ENST00000445866 COX7CP15954 63 aa8.95□□□□□ -0.98
SGCE-206ENST00000445866 C7orf65Q6ZTY9 151 aa8.95□□□□□ -0.98
SGCE-206ENST00000445866 C5orf47Q569G3 176 aa8.94□□□□□ -0.98
SGCE-206ENST00000445866 MP68P56378 58 aa8.94□□□□□ -0.98
SGCE-206ENST00000445866 TRAV7A0A075B6U4 112 aa8.93□□□□□ -0.98
SGCE-206ENST00000445866 HRES1P13985 223 aa8.91□□□□□ -0.98
SGCE-206ENST00000445866 LOC101927531A0A1B0GV80 90 aa8.9□□□□□ -0.98
SGCE-206ENST00000445866 SERP2Q8N6R1 65 aa8.9□□□□□ -0.98
SGCE-206ENST00000445866 C1orf64Q8NEQ6 169 aa8.9□□□□□ -0.98
SGCE-206ENST00000445866 LINC00208Q96KT6 92 aa8.9□□□□□ -0.98
SGCE-206ENST00000445866 CYP4F30PQ9H0H9 118 aa8.89□□□□□ -0.99
SGCE-206ENST00000445866 RBM12B-AS1Q9P1G2 102 aa8.87□□□□□ -0.99
SGCE-206ENST00000445866 A0A0U1RQV1 116 aa8.86□□□□□ -0.99
SGCE-206ENST00000445866 COX6B2Q6YFQ2 88 aa8.85□□□□□ -0.99
SGCE-206ENST00000445866 H3BPC8 53 aa8.84□□□□□ -0.99
SGCE-206ENST00000445866 MPLKIPQ8TAP9 179 aa8.84□□□□□ -0.99
SGCE-206ENST00000445866 FAM236DA0A1B0GTK5 79 aa8.81□□□□□ -1
SGCE-206ENST00000445866 FAM236CP0DP71 79 aa8.81□□□□□ -1
SGCE-206ENST00000445866 KRTAP19-2Q3LHN2 52 aa8.81□□□□□ -1
SGCE-206ENST00000445866 C4orf26Q17RF5 130 aa8.8□□□□□ -1
SGCE-206ENST00000445866 FAT4Q6V0I7 4981 aa8.79□□□□□ -1
SGCE-206ENST00000445866 LCE2CQ5TA81 110 aa8.77□□□□□ -1.01
SGCE-206ENST00000445866 LCE2AQ5TA79 106 aaPredicted RBP8.76□□□□□ -1.01
SGCE-206ENST00000445866 TMEM258P61165 79 aa8.75□□□□□ -1.01
SGCE-206ENST00000445866 KLKP1Q107X0 134 aa8.75□□□□□ -1.01
SGCE-206ENST00000445866 C20orf197Q8N268 126 aa8.72□□□□□ -1.01
SGCE-206ENST00000445866 SNURFQ9Y675 71 aa8.72□□□□□ -1.01
SGCE-206ENST00000445866 RPS28P62857 69 aaKnown RBP8.69□□□□□ -1.02
SGCE-206ENST00000445866 H1FX-AS1Q4G0G2 97 aa8.65□□□□□ -1.02
SGCE-206ENST00000445866 KRTAP3-1Q9BYR8 98 aa8.65□□□□□ -1.02
SGCE-206ENST00000445866 CYSTM1Q9H1C7 97 aa8.65□□□□□ -1.02
SGCE-206ENST00000445866 FLGP20930 4061 aaPredicted RBP8.64□□□□□ -1.03
SGCE-206ENST00000445866 MT1HP80294 61 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms