RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 PRR4Q16378 134 aa5.42□□□□□ -1.54
LINC00642-203ENST00000444942 KRTAP13-2Q52LG2 175 aa5.42□□□□□ -1.54
LINC00642-203ENST00000444942 BPY2O14599 106 aa5.42□□□□□ -1.54
LINC00642-203ENST00000444942 FAM229BQ4G0N7 80 aa5.4□□□□□ -1.55
LINC00642-203ENST00000444942 IGLV9-49A0A0B4J1Y8 123 aa5.38□□□□□ -1.55
LINC00642-203ENST00000444942 CCDC179H3BU77 68 aa5.38□□□□□ -1.55
LINC00642-203ENST00000444942 COX7CP15954 63 aa5.38□□□□□ -1.55
LINC00642-203ENST00000444942 LINC00483Q53H64 154 aa5.38□□□□□ -1.55
LINC00642-203ENST00000444942 C9orf153Q5TBE3 101 aa5.38□□□□□ -1.55
LINC00642-203ENST00000444942 A0A0G2JQZ4 141 aa5.37□□□□□ -1.55
LINC00642-203ENST00000444942 UQCRQO14949 82 aa5.37□□□□□ -1.55
LINC00642-203ENST00000444942 IGKV4-1P06312 121 aa5.37□□□□□ -1.55
LINC00642-203ENST00000444942 SERP2Q8N6R1 65 aa5.37□□□□□ -1.55
LINC00642-203ENST00000444942 A0A087WSZ3 146 aa5.36□□□□□ -1.55
LINC00642-203ENST00000444942 LINC00304Q8N9R0 145 aa5.36□□□□□ -1.55
LINC00642-203ENST00000444942 MOBPQ13875 183 aa5.35□□□□□ -1.55
LINC00642-203ENST00000444942 SMIM20Q8N5G0 67 aa5.35□□□□□ -1.55
LINC00642-203ENST00000444942 Q8N9L7 120 aa5.34□□□□□ -1.55
LINC00642-203ENST00000444942 RETNLBQ9BQ08 111 aa5.33□□□□□ -1.56
LINC00642-203ENST00000444942 TRAV7A0A075B6U4 112 aa5.32□□□□□ -1.56
LINC00642-203ENST00000444942 DSCR10P59022 87 aa5.31□□□□□ -1.56
LINC00642-203ENST00000444942 C4orf48Q5BLP8 95 aa5.31□□□□□ -1.56
LINC00642-203ENST00000444942 SS18L2Q9UHA2 77 aa5.3□□□□□ -1.56
LINC00642-203ENST00000444942 K7EQZ3 153 aa5.29□□□□□ -1.56
LINC00642-203ENST00000444942 HRCT1Q6UXD1 115 aa5.29□□□□□ -1.56
LINC00642-203ENST00000444942 J3KT08 172 aa5.29□□□□□ -1.56
LINC00642-203ENST00000444942 DEFB116Q30KQ4 102 aa5.28□□□□□ -1.56
LINC00642-203ENST00000444942 SSBP3-AS1Q7Z2R9 100 aa5.28□□□□□ -1.56
LINC00642-203ENST00000444942 HCG22E2RYF7 251 aa5.27□□□□□ -1.57
LINC00642-203ENST00000444942 SPAG11AQ6PDA7 123 aa5.27□□□□□ -1.57
LINC00642-203ENST00000444942 LINC00472Q9H8W2 130 aa5.27□□□□□ -1.57
LINC00642-203ENST00000444942 A8MWP4 228 aa5.26□□□□□ -1.57
LINC00642-203ENST00000444942 C20orf197Q8N268 126 aa5.25□□□□□ -1.57
LINC00642-203ENST00000444942 NDUFB1O75438 58 aa5.24□□□□□ -1.57
LINC00642-203ENST00000444942 SPINK1P00995 79 aa5.24□□□□□ -1.57
LINC00642-203ENST00000444942 CD164Q04900 197 aa5.24□□□□□ -1.57
LINC00642-203ENST00000444942 PRR15Q8IV56 129 aa5.24□□□□□ -1.57
LINC00642-203ENST00000444942 SSPOA2VEC9 5147 aa5.23□□□□□ -1.57
LINC00642-203ENST00000444942 SYNE2Q8WXH0 6885 aaKnown RBP5.23□□□□□ -1.57
LINC00642-203ENST00000444942 OCR1Q9BZK8 76 aa5.23□□□□□ -1.57
LINC00642-203ENST00000444942 IGLV7-46A0A075B6I9 117 aa5.22□□□□□ -1.57
LINC00642-203ENST00000444942 WFDC13Q8IUB5 93 aa5.22□□□□□ -1.57
LINC00642-203ENST00000444942 Q96NJ1 140 aa5.22□□□□□ -1.57
LINC00642-203ENST00000444942 CASC2Q6XLA1 102 aa5.21□□□□□ -1.58
LINC00642-203ENST00000444942 LORP23490 312 aaPredicted RBP5.2□□□□□ -1.58
LINC00642-203ENST00000444942 TMEM258P61165 79 aa5.2□□□□□ -1.58
LINC00642-203ENST00000444942 KLKP1Q107X0 134 aa5.2□□□□□ -1.58
LINC00642-203ENST00000444942 CYSTM1Q9H1C7 97 aa5.2□□□□□ -1.58
LINC00642-203ENST00000444942 FCGBPQ9Y6R7 5405 aaPredicted RBP5.19□□□□□ -1.58
LINC00642-203ENST00000444942 TMEM254Q8TBM7 123 aa5.19□□□□□ -1.58
LINC00642-203ENST00000444942 KRTAP4-8Q9BYQ9 185 aa5.19□□□□□ -1.58
LINC00642-203ENST00000444942 MACF1Q9UPN3 7388 aaKnown RBP5.18□□□□□ -1.58
LINC00642-203ENST00000444942 SNURFQ9Y675 71 aa5.18□□□□□ -1.58
LINC00642-203ENST00000444942 MMP24-AS1A0A0U1RRL7 71 aa5.17□□□□□ -1.58
LINC00642-203ENST00000444942 A0A1B0GVX0 72 aa5.17□□□□□ -1.58
LINC00642-203ENST00000444942 NDUFC1O43677 76 aa5.17□□□□□ -1.58
LINC00642-203ENST00000444942 LCE2CQ5TA81 110 aa5.17□□□□□ -1.58
LINC00642-203ENST00000444942 USH2AO75445 5202 aa5.17□□□□□ -1.58
LINC00642-203ENST00000444942 RPS29P62273 56 aaKnown RBP5.16□□□□□ -1.58
LINC00642-203ENST00000444942 TPRXLQ17RH7 258 aa5.16□□□□□ -1.58
LINC00642-203ENST00000444942 ASB16-AS1Q495Z4 193 aa5.16□□□□□ -1.58
LINC00642-203ENST00000444942 LIMD2Q9BT23 127 aa5.16□□□□□ -1.58
LINC00642-203ENST00000444942 hDV103S1A0JD37 113 aa5.16□□□□□ -1.58
LINC00642-203ENST00000444942 KRTAP10-6P60371 365 aaPredicted RBP5.16□□□□□ -1.58
LINC00642-203ENST00000444942 C5orf47Q569G3 176 aa5.16□□□□□ -1.58
LINC00642-203ENST00000444942 KRTAP4-1Q9BYQ7 146 aa5.16□□□□□ -1.58
LINC00642-203ENST00000444942 C8orf17Q9NRJ1 99 aa5.16□□□□□ -1.58
LINC00642-203ENST00000444942 IGHV6-1A0A0B4J1U7 121 aa5.15□□□□□ -1.59
LINC00642-203ENST00000444942 H7BZZ5 65 aa5.15□□□□□ -1.59
LINC00642-203ENST00000444942 MT1HP80294 61 aa5.15□□□□□ -1.59
LINC00642-203ENST00000444942 FP248Q71RG6 208 aaPredicted RBP5.15□□□□□ -1.59
LINC00642-203ENST00000444942 FAM236DA0A1B0GTK5 79 aa5.14□□□□□ -1.59
LINC00642-203ENST00000444942 FAM236CP0DP71 79 aa5.14□□□□□ -1.59
LINC00642-203ENST00000444942 MP68P56378 58 aa5.14□□□□□ -1.59
LINC00642-203ENST00000444942 Q5XG85 94 aa5.14□□□□□ -1.59
LINC00642-203ENST00000444942 KRTAP13-3Q3SY46 172 aa5.12□□□□□ -1.59
LINC00642-203ENST00000444942 C9orf92A6NGG3 77 aa5.11□□□□□ -1.59
LINC00642-203ENST00000444942 C8orf87E5RJ46 101 aa5.11□□□□□ -1.59
LINC00642-203ENST00000444942 ATP5EP56381 51 aaPredicted RBP5.11□□□□□ -1.59
LINC00642-203ENST00000444942 MRPL34Q9BQ48 92 aaKnown RBP5.11□□□□□ -1.59
LINC00642-203ENST00000444942 TP53AIP1Q9HCN2 124 aa5.11□□□□□ -1.59
LINC00642-203ENST00000444942 H0Y9P7 68 aa5.1□□□□□ -1.59
LINC00642-203ENST00000444942 H3BPC8 53 aa5.1□□□□□ -1.59
LINC00642-203ENST00000444942 C1orf195Q5TG92 126 aa5.1□□□□□ -1.59
LINC00642-203ENST00000444942 ZCCHC13Q8WW36 166 aaKnown RBP5.09□□□□□ -1.59
LINC00642-203ENST00000444942 TRAV22A0A0B4J277 110 aa5.08□□□□□ -1.6
LINC00642-203ENST00000444942 NDUFS5O43920 106 aa5.08□□□□□ -1.6
LINC00642-203ENST00000444942 XP32Q5T750 250 aa5.08□□□□□ -1.6
LINC00642-203ENST00000444942 KRTAP19-2Q3LHN2 52 aa5.07□□□□□ -1.6
LINC00642-203ENST00000444942 LINC00208Q96KT6 92 aa5.07□□□□□ -1.6
LINC00642-203ENST00000444942 RPS28P62857 69 aaKnown RBP5.06□□□□□ -1.6
LINC00642-203ENST00000444942 LINC00313P59037 77 aa5.05□□□□□ -1.6
LINC00642-203ENST00000444942 NOTCH2NLQ7Z3S9 236 aa5.05□□□□□ -1.6
LINC00642-203ENST00000444942 SERP1Q9Y6X1 66 aa5.04□□□□□ -1.6
LINC00642-203ENST00000444942 C1orf64Q8NEQ6 169 aa5.04□□□□□ -1.6
LINC00642-203ENST00000444942 SEC61BP60468 96 aaKnown RBP5□□□□□ -1.61
LINC00642-203ENST00000444942 KRTAP19-1Q8IUB9 90 aa4.99□□□□□ -1.61
LINC00642-203ENST00000444942 LOC101927531A0A1B0GV80 90 aa4.98□□□□□ -1.61
LINC00642-203ENST00000444942 KRTAP6-3Q3LI67 103 aa4.98□□□□□ -1.61
LINC00642-203ENST00000444942 PCOTHQ58A44 107 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms