RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 UBR5O95071 2799 aaPredicted RBP4.43□□□□□ -1.7
RIF1-205ENST00000444746 A0A1B0GVY2 172 aa4.43□□□□□ -1.7
RIF1-205ENST00000444746 H3BS24 57 aa4.43□□□□□ -1.7
RIF1-205ENST00000444746 COL6A5A8TX70 2615 aa4.42□□□□□ -1.7
RIF1-205ENST00000444746 ITPR1Q14643 2758 aa4.42□□□□□ -1.7
RIF1-205ENST00000444746 SETXQ7Z333 2677 aaKnown RBP4.42□□□□□ -1.7
RIF1-205ENST00000444746 NOTCH1P46531 2555 aa4.41□□□□□ -1.7
RIF1-205ENST00000444746 CSMD1Q96PZ7 3565 aa4.39□□□□□ -1.71
RIF1-205ENST00000444746 STAB1Q9NY15 2570 aa4.39□□□□□ -1.71
RIF1-205ENST00000444746 A8MUU9 505 aa4.38□□□□□ -1.71
RIF1-205ENST00000444746 HIVEP1P15822 2718 aa4.38□□□□□ -1.71
RIF1-205ENST00000444746 PLAC4Q8WY50 150 aa4.38□□□□□ -1.71
RIF1-205ENST00000444746 LAMA5O15230 3695 aa4.36□□□□□ -1.71
RIF1-205ENST00000444746 DMDP11532 3685 aa4.36□□□□□ -1.71
RIF1-205ENST00000444746 C20orf166-AS1Q96NR2 134 aa4.36□□□□□ -1.71
RIF1-205ENST00000444746 UTP20O75691 2785 aaKnown RBP4.34□□□□□ -1.71
RIF1-205ENST00000444746 BAHCC1Q9P281 2608 aa4.34□□□□□ -1.71
RIF1-205ENST00000444746 NBEAL1Q6ZS30 2694 aa4.33□□□□□ -1.72
RIF1-205ENST00000444746 KRTAP1-4P0C5Y4 121 aa4.33□□□□□ -1.72
RIF1-205ENST00000444746 A6NN06 94 aa4.32□□□□□ -1.72
RIF1-205ENST00000444746 ASB16-AS1Q495Z4 193 aa4.31□□□□□ -1.72
RIF1-205ENST00000444746 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
RIF1-205ENST00000444746 SMG1Q96Q15 3661 aaKnown RBP4.29□□□□□ -1.72
RIF1-205ENST00000444746 FLNCQ14315 2725 aa4.28□□□□□ -1.72
RIF1-205ENST00000444746 NSD1Q96L73 2696 aaPredicted RBP4.28□□□□□ -1.73
RIF1-205ENST00000444746 KRTAP25-1Q3LHN0 102 aa4.27□□□□□ -1.73
RIF1-205ENST00000444746 XP32Q5T750 250 aa4.26□□□□□ -1.73
RIF1-205ENST00000444746 FBN2P35556 2912 aa4.26□□□□□ -1.73
RIF1-205ENST00000444746 HRNRQ86YZ3 2850 aaPredicted RBP4.26□□□□□ -1.73
RIF1-205ENST00000444746 CELSR2Q9HCU4 2923 aa4.25□□□□□ -1.73
RIF1-205ENST00000444746 RPS29P62273 56 aaKnown RBP4.25□□□□□ -1.73
RIF1-205ENST00000444746 SVEP1Q4LDE5 3571 aa4.24□□□□□ -1.73
RIF1-205ENST00000444746 APCP25054 2843 aa4.23□□□□□ -1.73
RIF1-205ENST00000444746 ITPR2Q14571 2701 aa4.23□□□□□ -1.73
RIF1-205ENST00000444746 MUC3AQ02505 3323 aa4.22□□□□□ -1.73
RIF1-205ENST00000444746 DCHS2Q6V1P9 2916 aa4.22□□□□□ -1.73
RIF1-205ENST00000444746 ZANQ9Y493 2812 aa4.2□□□□□ -1.74
RIF1-205ENST00000444746 STAB2Q8WWQ8 2551 aa4.2□□□□□ -1.74
RIF1-205ENST00000444746 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
RIF1-205ENST00000444746 A0A0A0MQY5 61 aa4.19□□□□□ -1.74
RIF1-205ENST00000444746 TENM4Q6N022 2769 aa4.18□□□□□ -1.74
RIF1-205ENST00000444746 KRTAP16-1A8MUX0 517 aa4.18□□□□□ -1.74
RIF1-205ENST00000444746 DMBT1Q9UGM3 2413 aaPredicted RBP4.18□□□□□ -1.74
RIF1-205ENST00000444746 ANK3Q12955 4377 aaKnown RBP4.18□□□□□ -1.74
RIF1-205ENST00000444746 CSMD2Q7Z408 3487 aa4.18□□□□□ -1.74
RIF1-205ENST00000444746 KRTAP10-8P60410 259 aa4.17□□□□□ -1.74
RIF1-205ENST00000444746 H0YAA0 97 aa4.16□□□□□ -1.74
RIF1-205ENST00000444746 NBPF19A0A087WUL8 3843 aa4.16□□□□□ -1.74
RIF1-205ENST00000444746 P0C880 135 aa4.15□□□□□ -1.74
RIF1-205ENST00000444746 CUBNO60494 3623 aa4.15□□□□□ -1.75
RIF1-205ENST00000444746 TENM2Q9NT68 2774 aa4.14□□□□□ -1.75
RIF1-205ENST00000444746 KMT2BQ9UMN6 2715 aaPredicted RBP4.13□□□□□ -1.75
RIF1-205ENST00000444746 TNP1P09430 55 aa4.1□□□□□ -1.75
RIF1-205ENST00000444746 KRTAP10-10P60014 251 aa4.1□□□□□ -1.75
RIF1-205ENST00000444746 KRTAP21-3Q3LHN1 58 aa4.1□□□□□ -1.75
RIF1-205ENST00000444746 FLG2Q5D862 2391 aaPredicted RBP4.09□□□□□ -1.76
RIF1-205ENST00000444746 KRTAP13-3Q3SY46 172 aa4.08□□□□□ -1.76
RIF1-205ENST00000444746 CELSR1Q9NYQ6 3014 aa4.06□□□□□ -1.76
RIF1-205ENST00000444746 NF1P21359 2839 aa4.05□□□□□ -1.76
RIF1-205ENST00000444746 NIPBLQ6KC79 2804 aaeCLIP4.02□□□□□ -1.771e-8■■□□□ 13.7
RIF1-205ENST00000444746 TPRXLQ17RH7 258 aa4.01□□□□□ -1.77
RIF1-205ENST00000444746 SPENQ96T58 3664 aaKnown RBP4□□□□□ -1.77
RIF1-205ENST00000444746 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
RIF1-205ENST00000444746 FBN1P35555 2871 aaKnown RBP3.98□□□□□ -1.77
RIF1-205ENST00000444746 PDZD2O15018 2839 aa3.96□□□□□ -1.78
RIF1-205ENST00000444746 KRTAP3-1Q9BYR8 98 aa3.95□□□□□ -1.78
RIF1-205ENST00000444746 ZFHX3Q15911 3703 aa3.93□□□□□ -1.78
RIF1-205ENST00000444746 TENM3Q9P273 2699 aa3.93□□□□□ -1.78
RIF1-205ENST00000444746 HUWE1Q7Z6Z7 4374 aaKnown RBP3.92□□□□□ -1.78
RIF1-205ENST00000444746 MXRA5Q9NR99 2828 aa3.92□□□□□ -1.78
RIF1-205ENST00000444746 BSNQ9UPA5 3926 aa3.91□□□□□ -1.78
RIF1-205ENST00000444746 KRTAP4-5Q9BYR2 181 aa3.9□□□□□ -1.79
RIF1-205ENST00000444746 OTOGQ6ZRI0 2925 aa3.88□□□□□ -1.79
RIF1-205ENST00000444746 KRTAP13-4Q3LI77 160 aa3.87□□□□□ -1.79
RIF1-205ENST00000444746 PKD1L1Q8TDX9 2849 aa3.87□□□□□ -1.79
RIF1-205ENST00000444746 TENM1Q9UKZ4 2725 aa3.86□□□□□ -1.79
RIF1-205ENST00000444746 VWFP04275 2813 aa3.84□□□□□ -1.8
RIF1-205ENST00000444746 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
RIF1-205ENST00000444746 TGP01266 2768 aa3.83□□□□□ -1.8
RIF1-205ENST00000444746 TRRAPQ9Y4A5 3859 aa3.83□□□□□ -1.8
RIF1-205ENST00000444746 PP632Q6XCG6 107 aa3.8□□□□□ -1.8
RIF1-205ENST00000444746 MT1HL1P0DM35 61 aa3.76□□□□□ -1.81
RIF1-205ENST00000444746 VPS13CQ709C8 3753 aa3.76□□□□□ -1.81
RIF1-205ENST00000444746 PRO2289Q9P1D8 64 aa3.76□□□□□ -1.81
RIF1-205ENST00000444746 KRTAP10-6P60371 365 aaPredicted RBP3.75□□□□□ -1.81
RIF1-205ENST00000444746 CSMD3Q7Z407 3707 aa3.7□□□□□ -1.82
RIF1-205ENST00000444746 CRCT1Q9UGL9 99 aa3.7□□□□□ -1.82
RIF1-205ENST00000444746 DNAH9Q9NYC9 4486 aa3.69□□□□□ -1.82
RIF1-205ENST00000444746 KRTAP3-3Q9BYR6 98 aa3.67□□□□□ -1.82
RIF1-205ENST00000444746 LORP23490 312 aaPredicted RBP3.66□□□□□ -1.82
RIF1-205ENST00000444746 KRTAP10-4P60372 401 aaPredicted RBP3.66□□□□□ -1.82
RIF1-205ENST00000444746 FBN3Q75N90 2809 aa3.66□□□□□ -1.82
RIF1-205ENST00000444746 KRTAP15-1Q3LI76 137 aa3.65□□□□□ -1.82
RIF1-205ENST00000444746 DNAH5Q8TE73 4624 aa3.64□□□□□ -1.83
RIF1-205ENST00000444746 KRTAP3-2Q9BYR7 98 aa3.64□□□□□ -1.83
RIF1-205ENST00000444746 PLECQ15149 4684 aaKnown RBP3.63□□□□□ -1.83
RIF1-205ENST00000444746 DNAH10Q8IVF4 4471 aa3.63□□□□□ -1.83
RIF1-205ENST00000444746 ZNF469Q96JG9 3925 aaPredicted RBP3.6□□□□□ -1.83
RIF1-205ENST00000444746 DNAH1Q9P2D7 4330 aa3.59□□□□□ -1.84
RIF1-205ENST00000444746 AKAP9Q99996 3911 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms