RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 TRBV20-1A0A075B6N2 111 aa10.82□□□□□ -0.68
CDKN3-204ENST00000442975 LORP23490 312 aaPredicted RBP10.82□□□□□ -0.68
CDKN3-204ENST00000442975 C8orf87E5RJ46 101 aa10.81□□□□□ -0.68
CDKN3-204ENST00000442975 J3KT08 172 aa10.81□□□□□ -0.68
CDKN3-204ENST00000442975 LOC110117498A0A087WWA1 95 aa10.8□□□□□ -0.68
CDKN3-204ENST00000442975 KRTAP9-6A0A140TA67 174 aa10.8□□□□□ -0.68
CDKN3-204ENST00000442975 C14orf132Q9NPU4 83 aa10.8□□□□□ -0.68
CDKN3-204ENST00000442975 LOC105371267A0A1B0GV96 52 aa10.79□□□□□ -0.68
CDKN3-204ENST00000442975 FSIP2Q5CZC0 6907 aa10.76□□□□□ -0.69
CDKN3-204ENST00000442975 PDE6GP18545 87 aa10.76□□□□□ -0.69
CDKN3-204ENST00000442975 NDUFB1O75438 58 aa10.73□□□□□ -0.69
CDKN3-204ENST00000442975 C9orf118A6NHY6 69 aa10.72□□□□□ -0.69
CDKN3-204ENST00000442975 A0A1B0GW54 56 aa10.71□□□□□ -0.69
CDKN3-204ENST00000442975 MTURNQ8N3F0 131 aa10.71□□□□□ -0.69
CDKN3-204ENST00000442975 FAM236DA0A1B0GTK5 79 aa10.7□□□□□ -0.7
CDKN3-204ENST00000442975 FAM236CP0DP71 79 aa10.7□□□□□ -0.7
CDKN3-204ENST00000442975 A0A1W2PPM0 123 aa10.69□□□□□ -0.7
CDKN3-204ENST00000442975 A8MWP4 228 aa10.69□□□□□ -0.7
CDKN3-204ENST00000442975 TAX1BP3O14907 124 aa10.69□□□□□ -0.7
CDKN3-204ENST00000442975 H3BT86 120 aa10.66□□□□□ -0.7
CDKN3-204ENST00000442975 C8orf17Q9NRJ1 99 aa10.65□□□□□ -0.7
CDKN3-204ENST00000442975 IGKV3D-7A0A0C4DH55 119 aa10.64□□□□□ -0.71
CDKN3-204ENST00000442975 NREPQ16612 68 aa10.64□□□□□ -0.71
CDKN3-204ENST00000442975 ZCCHC13Q8WW36 166 aaKnown RBP10.64□□□□□ -0.71
CDKN3-204ENST00000442975 HRES1P13985 223 aa10.63□□□□□ -0.71
CDKN3-204ENST00000442975 RBM12B-AS1Q9P1G2 102 aa10.63□□□□□ -0.71
CDKN3-204ENST00000442975 Q8N9P0 234 aaPredicted RBP10.59□□□□□ -0.71
CDKN3-204ENST00000442975 CRCT1Q9UGL9 99 aa10.58□□□□□ -0.72
CDKN3-204ENST00000442975 PRR15Q8IV56 129 aa10.57□□□□□ -0.72
CDKN3-204ENST00000442975 MPLKIPQ8TAP9 179 aa10.57□□□□□ -0.72
CDKN3-204ENST00000442975 SPCS1Q9Y6A9 102 aa10.57□□□□□ -0.72
CDKN3-204ENST00000442975 Q6ZVQ6 151 aa10.56□□□□□ -0.72
CDKN3-204ENST00000442975 SPINK7P58062 85 aa10.53□□□□□ -0.72
CDKN3-204ENST00000442975 MMP24-AS1A0A0U1RRL7 71 aa10.51□□□□□ -0.73
CDKN3-204ENST00000442975 K7EQZ3 153 aa10.51□□□□□ -0.73
CDKN3-204ENST00000442975 BPY2O14599 106 aa10.47□□□□□ -0.73
CDKN3-204ENST00000442975 COL5A1-AS1Q5SY13 56 aa10.47□□□□□ -0.73
CDKN3-204ENST00000442975 TMEM254Q8TBM7 123 aa10.47□□□□□ -0.73
CDKN3-204ENST00000442975 MRPL34Q9BQ48 92 aaKnown RBP10.47□□□□□ -0.73
CDKN3-204ENST00000442975 KRTAP9-8Q9BYQ0 159 aa10.45□□□□□ -0.74
CDKN3-204ENST00000442975 hDV103S1A0JD37 113 aa10.44□□□□□ -0.74
CDKN3-204ENST00000442975 NDUFS5O43920 106 aa10.44□□□□□ -0.74
CDKN3-204ENST00000442975 WFDC13Q8IUB5 93 aa10.44□□□□□ -0.74
CDKN3-204ENST00000442975 SMCPP49901 116 aaPredicted RBP10.43□□□□□ -0.74
CDKN3-204ENST00000442975 Q8N9L7 120 aa10.39□□□□□ -0.75
CDKN3-204ENST00000442975 K7EP34 96 aa10.38□□□□□ -0.75
CDKN3-204ENST00000442975 MT2AP02795 61 aa10.35□□□□□ -0.75
CDKN3-204ENST00000442975 PRO0461Q9UI25 63 aa10.35□□□□□ -0.75
CDKN3-204ENST00000442975 CASC2Q6XLA1 102 aa10.31□□□□□ -0.76
CDKN3-204ENST00000442975 UBL5Q9BZL1 73 aa10.3□□□□□ -0.76
CDKN3-204ENST00000442975 PCP4L1A6NKN8 68 aa10.29□□□□□ -0.76
CDKN3-204ENST00000442975 LINC00846Q9NV44 126 aa10.29□□□□□ -0.76
CDKN3-204ENST00000442975 IGKV2D-30A0A075B6S6 120 aa10.28□□□□□ -0.76
CDKN3-204ENST00000442975 MT1FP04733 61 aa10.28□□□□□ -0.76
CDKN3-204ENST00000442975 IGKV2-30P06310 120 aa10.28□□□□□ -0.76
CDKN3-204ENST00000442975 USH2AO75445 5202 aa10.28□□□□□ -0.76
CDKN3-204ENST00000442975 HCG22E2RYF7 251 aa10.26□□□□□ -0.77
CDKN3-204ENST00000442975 KRTAP10-10P60014 251 aa10.25□□□□□ -0.77
CDKN3-204ENST00000442975 GTF2H5Q6ZYL4 71 aa10.25□□□□□ -0.77
CDKN3-204ENST00000442975 Q5W150 140 aa10.23□□□□□ -0.77
CDKN3-204ENST00000442975 C7orf65Q6ZTY9 151 aa10.22□□□□□ -0.77
CDKN3-204ENST00000442975 SSPOA2VEC9 5147 aa10.17□□□□□ -0.78
CDKN3-204ENST00000442975 CXCL6P80162 114 aa10.16□□□□□ -0.78
CDKN3-204ENST00000442975 F8W1H4 67 aa10.15□□□□□ -0.78
CDKN3-204ENST00000442975 H1FX-AS1Q4G0G2 97 aa10.15□□□□□ -0.78
CDKN3-204ENST00000442975 ETDBQ3ZM63 59 aa10.14□□□□□ -0.79
CDKN3-204ENST00000442975 KRTAP9-3Q9BYQ3 159 aa10.11□□□□□ -0.79
CDKN3-204ENST00000442975 LCE2BO14633 110 aa10.08□□□□□ -0.8
CDKN3-204ENST00000442975 C4orf26Q17RF5 130 aa10.06□□□□□ -0.8
CDKN3-204ENST00000442975 TP53AIP1Q9HCN2 124 aa9.96□□□□□ -0.82
CDKN3-204ENST00000442975 FCGBPQ9Y6R7 5405 aaPredicted RBP9.91□□□□□ -0.82
CDKN3-204ENST00000442975 KRTAP19-1Q8IUB9 90 aa9.91□□□□□ -0.82
CDKN3-204ENST00000442975 KRTAP3-3Q9BYR6 98 aa9.91□□□□□ -0.82
CDKN3-204ENST00000442975 KRTAP3-2Q9BYR7 98 aa9.91□□□□□ -0.82
CDKN3-204ENST00000442975 ACYP1P07311 99 aa9.88□□□□□ -0.83
CDKN3-204ENST00000442975 C5orf47Q569G3 176 aa9.87□□□□□ -0.83
CDKN3-204ENST00000442975 C1orf64Q8NEQ6 169 aa9.87□□□□□ -0.83
CDKN3-204ENST00000442975 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.85□□□□□ -0.83
CDKN3-204ENST00000442975 KRTAP3-1Q9BYR8 98 aa9.85□□□□□ -0.83
CDKN3-204ENST00000442975 FAM240AA0A1B0GVK7 77 aa9.84□□□□□ -0.83
CDKN3-204ENST00000442975 S4R3F8 94 aa9.84□□□□□ -0.83
CDKN3-204ENST00000442975 ATP5EP2Q5VTU8 51 aa9.83□□□□□ -0.84
CDKN3-204ENST00000442975 HIST1H4AP62805 103 aaKnown RBP9.82□□□□□ -0.84
CDKN3-204ENST00000442975 TRAV22A0A0B4J277 110 aa9.79□□□□□ -0.84
CDKN3-204ENST00000442975 FAM236AA0A1B0GUQ0 79 aa9.76□□□□□ -0.85
CDKN3-204ENST00000442975 FAM236BA0A1B0GV22 79 aa9.76□□□□□ -0.85
CDKN3-204ENST00000442975 CYP4F30PQ9H0H9 118 aa9.76□□□□□ -0.85
CDKN3-204ENST00000442975 LCA10Q71F78 164 aa9.75□□□□□ -0.85
CDKN3-204ENST00000442975 LOC101927531A0A1B0GV80 90 aa9.73□□□□□ -0.85
CDKN3-204ENST00000442975 CSAG1Q6PB30 78 aa9.73□□□□□ -0.85
CDKN3-204ENST00000442975 KRTAP9-7A8MTY7 169 aa9.71□□□□□ -0.86
CDKN3-204ENST00000442975 KRTAP19-6Q3LI70 58 aa9.7□□□□□ -0.86
CDKN3-204ENST00000442975 MACF1Q9UPN3 7388 aaKnown RBP9.69□□□□□ -0.86
CDKN3-204ENST00000442975 A0A087WVE0 104 aa9.68□□□□□ -0.86
CDKN3-204ENST00000442975 A0A1B0GV90 55 aa9.68□□□□□ -0.86
CDKN3-204ENST00000442975 UQCRQO14949 82 aa9.67□□□□□ -0.86
CDKN3-204ENST00000442975 H0Y9P7 68 aa9.66□□□□□ -0.86
CDKN3-204ENST00000442975 LINC00643Q86TS7 51 aa9.66□□□□□ -0.86
CDKN3-204ENST00000442975 ATOX1O00244 68 aa9.63□□□□□ -0.87
CDKN3-204ENST00000442975 SYNE2Q8WXH0 6885 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms