RNA–Protein interactions for RNA: ENST00000441740.6

MEIS3-202, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MEIS3, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-202ENST00000441740 RETNLBQ9BQ08 111 aa12.08□□□□□ -0.48
MEIS3-202ENST00000441740 J3QL48 77 aa12.07□□□□□ -0.48
MEIS3-202ENST00000441740 A8MWP4 228 aa12.06□□□□□ -0.48
MEIS3-202ENST00000441740 NDUFB1O75438 58 aa12.05□□□□□ -0.48
MEIS3-202ENST00000441740 FAM236AA0A1B0GUQ0 79 aa12.04□□□□□ -0.48
MEIS3-202ENST00000441740 FAM236BA0A1B0GV22 79 aa12.04□□□□□ -0.48
MEIS3-202ENST00000441740 A0A087WVE0 104 aa12.03□□□□□ -0.48
MEIS3-202ENST00000441740 PRR15Q8IV56 129 aa12.01□□□□□ -0.49
MEIS3-202ENST00000441740 IGHV6-1A0A0B4J1U7 121 aa12□□□□□ -0.49
MEIS3-202ENST00000441740 A0A1B0GVX0 72 aa11.99□□□□□ -0.49
MEIS3-202ENST00000441740 PCLOQ9Y6V0 5065 aa11.96□□□□□ -0.5
MEIS3-202ENST00000441740 ATOX1O00244 68 aa11.95□□□□□ -0.5
MEIS3-202ENST00000441740 CCDC179H3BU77 68 aa11.95□□□□□ -0.5
MEIS3-202ENST00000441740 WFDC13Q8IUB5 93 aa11.9□□□□□ -0.5
MEIS3-202ENST00000441740 C8orf17Q9NRJ1 99 aa11.9□□□□□ -0.5
MEIS3-202ENST00000441740 HCG22E2RYF7 251 aa11.9□□□□□ -0.51
MEIS3-202ENST00000441740 UQCRQO14949 82 aa11.9□□□□□ -0.51
MEIS3-202ENST00000441740 NOTCH2NLQ7Z3S9 236 aa11.9□□□□□ -0.51
MEIS3-202ENST00000441740 MMP24-AS1A0A0U1RRL7 71 aa11.88□□□□□ -0.51
MEIS3-202ENST00000441740 LINC00313P59037 77 aa11.86□□□□□ -0.51
MEIS3-202ENST00000441740 PRR4Q16378 134 aa11.85□□□□□ -0.51
MEIS3-202ENST00000441740 CASC2Q6XLA1 102 aa11.85□□□□□ -0.51
MEIS3-202ENST00000441740 FP248Q71RG6 208 aaPredicted RBP11.85□□□□□ -0.51
MEIS3-202ENST00000441740 C8orf87E5RJ46 101 aa11.84□□□□□ -0.51
MEIS3-202ENST00000441740 COX7CP15954 63 aa11.84□□□□□ -0.51
MEIS3-202ENST00000441740 hDV103S1A0JD37 113 aa11.83□□□□□ -0.52
MEIS3-202ENST00000441740 C9orf92A6NGG3 77 aa11.83□□□□□ -0.52
MEIS3-202ENST00000441740 IGLV7-46A0A075B6I9 117 aa11.82□□□□□ -0.52
MEIS3-202ENST00000441740 SERP2Q8N6R1 65 aa11.78□□□□□ -0.52
MEIS3-202ENST00000441740 TMEM254Q8TBM7 123 aa11.75□□□□□ -0.53
MEIS3-202ENST00000441740 MRPL34Q9BQ48 92 aaKnown RBP11.74□□□□□ -0.53
MEIS3-202ENST00000441740 KRTAP16-1A8MUX0 517 aa11.72□□□□□ -0.53
MEIS3-202ENST00000441740 NDUFS5O43920 106 aa11.71□□□□□ -0.54
MEIS3-202ENST00000441740 SMIM20Q8N5G0 67 aa11.69□□□□□ -0.54
MEIS3-202ENST00000441740 KRTAP13-3Q3SY46 172 aa11.68□□□□□ -0.54
MEIS3-202ENST00000441740 Q8N9P0 234 aaPredicted RBP11.62□□□□□ -0.55
MEIS3-202ENST00000441740 OCR1Q9BZK8 76 aa11.62□□□□□ -0.55
MEIS3-202ENST00000441740 TPRXLQ17RH7 258 aa11.61□□□□□ -0.55
MEIS3-202ENST00000441740 SVIPQ8NHG7 77 aa11.6□□□□□ -0.55
MEIS3-202ENST00000441740 HERC1Q15751 4861 aa11.6□□□□□ -0.55
MEIS3-202ENST00000441740 TRAV7A0A075B6U4 112 aa11.59□□□□□ -0.55
MEIS3-202ENST00000441740 TMEM258P61165 79 aa11.57□□□□□ -0.56
MEIS3-202ENST00000441740 XP32Q5T750 250 aa11.56□□□□□ -0.56
MEIS3-202ENST00000441740 C20orf166-AS1Q96NR2 134 aa11.56□□□□□ -0.56
MEIS3-202ENST00000441740 TP53AIP1Q9HCN2 124 aa11.56□□□□□ -0.56
MEIS3-202ENST00000441740 A8MUU9 505 aa11.54□□□□□ -0.56
MEIS3-202ENST00000441740 LPAP08519 4548 aa11.53□□□□□ -0.56
MEIS3-202ENST00000441740 Q75L30 129 aa11.5□□□□□ -0.57
MEIS3-202ENST00000441740 TRAV22A0A0B4J277 110 aa11.46□□□□□ -0.57
MEIS3-202ENST00000441740 RPS28P62857 69 aaKnown RBP11.46□□□□□ -0.57
MEIS3-202ENST00000441740 Q5W150 140 aa11.46□□□□□ -0.57
MEIS3-202ENST00000441740 RPL37P61927 97 aaKnown RBP11.46□□□□□ -0.58
MEIS3-202ENST00000441740 H0Y9P7 68 aa11.45□□□□□ -0.58
MEIS3-202ENST00000441740 C20orf197Q8N268 126 aa11.44□□□□□ -0.58
MEIS3-202ENST00000441740 CYSTM1Q9H1C7 97 aa11.44□□□□□ -0.58
MEIS3-202ENST00000441740 KLKP1Q107X0 134 aa11.44□□□□□ -0.58
MEIS3-202ENST00000441740 ZCCHC13Q8WW36 166 aaKnown RBP11.44□□□□□ -0.58
MEIS3-202ENST00000441740 C5orf47Q569G3 176 aa11.42□□□□□ -0.58
MEIS3-202ENST00000441740 MP68P56378 58 aa11.41□□□□□ -0.58
MEIS3-202ENST00000441740 ATP11AUNQ6ZP68 121 aa11.4□□□□□ -0.58
MEIS3-202ENST00000441740 LRP2P98164 4655 aa11.39□□□□□ -0.59
MEIS3-202ENST00000441740 NDUFC1O43677 76 aa11.39□□□□□ -0.59
MEIS3-202ENST00000441740 HMCN2Q8NDA2 5059 aa11.38□□□□□ -0.59
MEIS3-202ENST00000441740 LINC00208Q96KT6 92 aa11.36□□□□□ -0.59
MEIS3-202ENST00000441740 SNURFQ9Y675 71 aa11.33□□□□□ -0.59
MEIS3-202ENST00000441740 C1orf64Q8NEQ6 169 aa11.33□□□□□ -0.6
MEIS3-202ENST00000441740 H7BZZ5 65 aa11.32□□□□□ -0.6
MEIS3-202ENST00000441740 FAM236DA0A1B0GTK5 79 aa11.31□□□□□ -0.6
MEIS3-202ENST00000441740 FAM236CP0DP71 79 aa11.31□□□□□ -0.6
MEIS3-202ENST00000441740 PCOTHQ58A44 107 aa11.31□□□□□ -0.6
MEIS3-202ENST00000441740 A0A0U1RQV1 116 aa11.29□□□□□ -0.6
MEIS3-202ENST00000441740 IGKV2D-30A0A075B6S6 120 aa11.28□□□□□ -0.6
MEIS3-202ENST00000441740 H3BPC8 53 aa11.28□□□□□ -0.6
MEIS3-202ENST00000441740 IGKV2-30P06310 120 aa11.28□□□□□ -0.6
MEIS3-202ENST00000441740 ATP5EP56381 51 aaPredicted RBP11.28□□□□□ -0.6
MEIS3-202ENST00000441740 LOC101927531A0A1B0GV80 90 aa11.26□□□□□ -0.61
MEIS3-202ENST00000441740 SEC61BP60468 96 aaKnown RBP11.23□□□□□ -0.61
MEIS3-202ENST00000441740 SERP1Q9Y6X1 66 aa11.21□□□□□ -0.62
MEIS3-202ENST00000441740 C7orf65Q6ZTY9 151 aa11.2□□□□□ -0.62
MEIS3-202ENST00000441740 CYP4F30PQ9H0H9 118 aa11.2□□□□□ -0.62
MEIS3-202ENST00000441740 SPINK7P58062 85 aa11.18□□□□□ -0.62
MEIS3-202ENST00000441740 MUC17Q685J3 4493 aa11.07□□□□□ -0.64
MEIS3-202ENST00000441740 HRES1P13985 223 aa11.03□□□□□ -0.64
MEIS3-202ENST00000441740 KRTAP4-1Q9BYQ7 146 aa11.01□□□□□ -0.65
MEIS3-202ENST00000441740 SMIM26A0A096LP01 95 aa11□□□□□ -0.65
MEIS3-202ENST00000441740 C4orf26Q17RF5 130 aa10.99□□□□□ -0.65
MEIS3-202ENST00000441740 UBR4Q5T4S7 5183 aa10.94□□□□□ -0.66
MEIS3-202ENST00000441740 SPANXA2-OT1Q8N9U9 137 aa10.9□□□□□ -0.66
MEIS3-202ENST00000441740 MUC2Q02817 5179 aa10.86□□□□□ -0.67
MEIS3-202ENST00000441740 COX6B2Q6YFQ2 88 aa10.84□□□□□ -0.67
MEIS3-202ENST00000441740 RBM12B-AS1Q9P1G2 102 aa10.84□□□□□ -0.67
MEIS3-202ENST00000441740 MPLKIPQ8TAP9 179 aa10.82□□□□□ -0.68
MEIS3-202ENST00000441740 RNF213Q63HN8 5207 aa10.81□□□□□ -0.68
MEIS3-202ENST00000441740 DMAC1Q96GE9 116 aa10.8□□□□□ -0.68
MEIS3-202ENST00000441740 KRTAP3-1Q9BYR8 98 aa10.78□□□□□ -0.68
MEIS3-202ENST00000441740 A8MUN3 132 aa10.73□□□□□ -0.69
MEIS3-202ENST00000441740 ACYP2P14621 99 aa10.72□□□□□ -0.69
MEIS3-202ENST00000441740 H1FX-AS1Q4G0G2 97 aa10.65□□□□□ -0.7
MEIS3-202ENST00000441740 Q1T7F1 81 aa10.64□□□□□ -0.71
MEIS3-202ENST00000441740 COA5Q86WW8 74 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms