RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 TMEM256-PLSCR3K7ERE1 68 aa6.7□□□□□ -1.34
PTPRN-205ENST00000440552 TRIAP1O43715 76 aa6.7□□□□□ -1.34
PTPRN-205ENST00000440552 DNAL4O96015 105 aa6.7□□□□□ -1.34
PTPRN-205ENST00000440552 WFDC13Q8IUB5 93 aa6.7□□□□□ -1.34
PTPRN-205ENST00000440552 A0A1B0GV72 72 aa6.69□□□□□ -1.34
PTPRN-205ENST00000440552 TMEM238LA0A1B0GVL6 79 aa6.67□□□□□ -1.34
PTPRN-205ENST00000440552 A6NJY4 79 aa6.67□□□□□ -1.34
PTPRN-205ENST00000440552 J3KT08 172 aa6.67□□□□□ -1.34
PTPRN-205ENST00000440552 C14orf144Q96I85 54 aa6.67□□□□□ -1.34
PTPRN-205ENST00000440552 UBE2V1Q13404 147 aa6.66□□□□□ -1.34
PTPRN-205ENST00000440552 C2orf91Q6ZV80 131 aa6.66□□□□□ -1.34
PTPRN-205ENST00000440552 CEND1Q8N111 149 aa6.66□□□□□ -1.34
PTPRN-205ENST00000440552 MUC12Q9UKN1 5478 aa6.65□□□□□ -1.35
PTPRN-205ENST00000440552 C21orf62-AS1Q17RA5 79 aa6.63□□□□□ -1.35
PTPRN-205ENST00000440552 FXYD2P54710 66 aa6.62□□□□□ -1.35
PTPRN-205ENST00000440552 SMIM6P0DI80 62 aa6.61□□□□□ -1.35
PTPRN-205ENST00000440552 VPS25Q9BRG1 176 aa6.61□□□□□ -1.35
PTPRN-205ENST00000440552 NDUFB1O75438 58 aa6.6□□□□□ -1.35
PTPRN-205ENST00000440552 H1FX-AS1Q4G0G2 97 aa6.6□□□□□ -1.35
PTPRN-205ENST00000440552 SPATA45Q537H7 98 aa6.6□□□□□ -1.35
PTPRN-205ENST00000440552 PAM16Q9Y3D7 125 aa6.6□□□□□ -1.35
PTPRN-205ENST00000440552 COX6CP09669 75 aa6.59□□□□□ -1.35
PTPRN-205ENST00000440552 RBM3P98179 157 aaKnown RBP6.59□□□□□ -1.35
PTPRN-205ENST00000440552 LYRM7Q5U5X0 104 aa6.59□□□□□ -1.35
PTPRN-205ENST00000440552 PSMB2P49721 201 aa6.58□□□□□ -1.36
PTPRN-205ENST00000440552 DSCR8Q96T75 97 aa6.58□□□□□ -1.36
PTPRN-205ENST00000440552 C8orf17Q9NRJ1 99 aa6.58□□□□□ -1.36
PTPRN-205ENST00000440552 Q6ZQT0 140 aa6.57□□□□□ -1.36
PTPRN-205ENST00000440552 IGKV3D-7A0A0C4DH55 119 aa6.55□□□□□ -1.36
PTPRN-205ENST00000440552 VAMP8Q9BV40 100 aa6.54□□□□□ -1.36
PTPRN-205ENST00000440552 C9JAW5 83 aa6.53□□□□□ -1.36
PTPRN-205ENST00000440552 KRTAP20-1Q3LI63 56 aa6.53□□□□□ -1.36
PTPRN-205ENST00000440552 Q6ZVQ6 151 aa6.52□□□□□ -1.37
PTPRN-205ENST00000440552 A6NN06 94 aa6.51□□□□□ -1.37
PTPRN-205ENST00000440552 K7ERJ3 54 aa6.51□□□□□ -1.37
PTPRN-205ENST00000440552 A0A1B0GW54 56 aa6.49□□□□□ -1.37
PTPRN-205ENST00000440552 HSD52Q0P140 79 aa6.49□□□□□ -1.37
PTPRN-205ENST00000440552 PRR15Q8IV56 129 aa6.46□□□□□ -1.38
PTPRN-205ENST00000440552 MT1BP07438 61 aa6.45□□□□□ -1.38
PTPRN-205ENST00000440552 BAALC-AS2P0C853 105 aa6.45□□□□□ -1.38
PTPRN-205ENST00000440552 TMEM254Q8TBM7 123 aa6.45□□□□□ -1.38
PTPRN-205ENST00000440552 MRPL34Q9BQ48 92 aaKnown RBP6.45□□□□□ -1.38
PTPRN-205ENST00000440552 KMT2DO14686 5537 aa6.43□□□□□ -1.38
PTPRN-205ENST00000440552 TSTD3H0UI37 97 aa6.43□□□□□ -1.38
PTPRN-205ENST00000440552 SCGB1C2P0DMR2 95 aa6.43□□□□□ -1.38
PTPRN-205ENST00000440552 KRTAP5-9P26371 169 aa6.43□□□□□ -1.38
PTPRN-205ENST00000440552 MDN1Q9NU22 5596 aa6.42□□□□□ -1.38
PTPRN-205ENST00000440552 LOC110117498A0A087WWA1 95 aa6.42□□□□□ -1.38
PTPRN-205ENST00000440552 MMP24-AS1A0A0U1RRL7 71 aa6.42□□□□□ -1.38
PTPRN-205ENST00000440552 Q5VV11 94 aa6.42□□□□□ -1.38
PTPRN-205ENST00000440552 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
PTPRN-205ENST00000440552 PYY3Q5JQD4 70 aa6.41□□□□□ -1.38
PTPRN-205ENST00000440552 JMJD7-PLA2G4BH0Y9G9 81 aa6.4□□□□□ -1.38
PTPRN-205ENST00000440552 PDE6GP18545 87 aa6.4□□□□□ -1.38
PTPRN-205ENST00000440552 KRTAP10-5P60370 271 aa6.39□□□□□ -1.39
PTPRN-205ENST00000440552 C7orf65Q6ZTY9 151 aa6.39□□□□□ -1.39
PTPRN-205ENST00000440552 IGKV2D-30A0A075B6S6 120 aa6.38□□□□□ -1.39
PTPRN-205ENST00000440552 IGKV2-30P06310 120 aa6.38□□□□□ -1.39
PTPRN-205ENST00000440552 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
PTPRN-205ENST00000440552 hDV103S1A0JD37 113 aa6.37□□□□□ -1.39
PTPRN-205ENST00000440552 FAM236AA0A1B0GUQ0 79 aa6.36□□□□□ -1.39
PTPRN-205ENST00000440552 FAM236BA0A1B0GV22 79 aa6.36□□□□□ -1.39
PTPRN-205ENST00000440552 PCP4L1A6NKN8 68 aa6.36□□□□□ -1.39
PTPRN-205ENST00000440552 NDUFS5O43920 106 aa6.35□□□□□ -1.39
PTPRN-205ENST00000440552 NREPQ16612 68 aa6.35□□□□□ -1.39
PTPRN-205ENST00000440552 Q5W150 140 aa6.34□□□□□ -1.39
PTPRN-205ENST00000440552 C5orf47Q569G3 176 aa6.33□□□□□ -1.4
PTPRN-205ENST00000440552 ATXN8Q156A1 80 aa6.31□□□□□ -1.4
PTPRN-205ENST00000440552 C4orf26Q17RF5 130 aa6.31□□□□□ -1.4
PTPRN-205ENST00000440552 K7EQZ3 153 aa6.3□□□□□ -1.4
PTPRN-205ENST00000440552 C14orf132Q9NPU4 83 aa6.3□□□□□ -1.4
PTPRN-205ENST00000440552 UQCR10Q9UDW1 63 aa6.3□□□□□ -1.4
PTPRN-205ENST00000440552 KRTAP2-3P0C7H8 128 aa6.29□□□□□ -1.4
PTPRN-205ENST00000440552 KRTAP2-4Q9BYR9 128 aa6.29□□□□□ -1.4
PTPRN-205ENST00000440552 CSAG1Q6PB30 78 aa6.28□□□□□ -1.4
PTPRN-205ENST00000440552 M0R143 59 aa6.25□□□□□ -1.41
PTPRN-205ENST00000440552 S4R3F8 94 aa6.25□□□□□ -1.41
PTPRN-205ENST00000440552 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
PTPRN-205ENST00000440552 KLKP1Q107X0 134 aa6.23□□□□□ -1.41
PTPRN-205ENST00000440552 HCG22E2RYF7 251 aa6.21□□□□□ -1.42
PTPRN-205ENST00000440552 CXCL6P80162 114 aa6.21□□□□□ -1.42
PTPRN-205ENST00000440552 BPY2O14599 106 aa6.2□□□□□ -1.42
PTPRN-205ENST00000440552 LCA10Q71F78 164 aa6.2□□□□□ -1.42
PTPRN-205ENST00000440552 CASC2Q6XLA1 102 aa6.19□□□□□ -1.42
PTPRN-205ENST00000440552 COL5A1-AS1Q5SY13 56 aa6.18□□□□□ -1.42
PTPRN-205ENST00000440552 NAA38Q9BRA0 125 aaKnown RBP6.17□□□□□ -1.42
PTPRN-205ENST00000440552 SMCPP49901 116 aaPredicted RBP6.16□□□□□ -1.42
PTPRN-205ENST00000440552 C1orf64Q8NEQ6 169 aa6.16□□□□□ -1.42
PTPRN-205ENST00000440552 IMUPQ9GZP8 106 aa6.16□□□□□ -1.42
PTPRN-205ENST00000440552 CRIPTQ9P021 101 aa6.15□□□□□ -1.42
PTPRN-205ENST00000440552 Q8N9L7 120 aa6.13□□□□□ -1.43
PTPRN-205ENST00000440552 SPRR2FQ96RM1 72 aa6.11□□□□□ -1.43
PTPRN-205ENST00000440552 SPRR2EP22531 72 aa6.1□□□□□ -1.43
PTPRN-205ENST00000440552 SPRR2BP35325 72 aa6.1□□□□□ -1.43
PTPRN-205ENST00000440552 SPRR2AP35326 72 aa6.1□□□□□ -1.43
PTPRN-205ENST00000440552 KRTAP3-3Q9BYR6 98 aa6.09□□□□□ -1.43
PTPRN-205ENST00000440552 H3BT86 120 aa6.07□□□□□ -1.44
PTPRN-205ENST00000440552 KRTAP2-2Q9BYT5 123 aa6.06□□□□□ -1.44
PTPRN-205ENST00000440552 KRTAP2-1Q9BYU5 128 aa6.06□□□□□ -1.44
PTPRN-205ENST00000440552 BATFQ16520 125 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms