RNA–Protein interactions for RNA: ENST00000439603.5

LONRF3-204, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best)

Gene LONRF3, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-204ENST00000439603 NDUFB1O75438 58 aa13.04□□□□□ -0.32
LONRF3-204ENST00000439603 FP248Q71RG6 208 aaPredicted RBP13.03□□□□□ -0.32
LONRF3-204ENST00000439603 Q8N9L7 120 aa13.02□□□□□ -0.32
LONRF3-204ENST00000439603 K7EQZ3 153 aa13.02□□□□□ -0.33
LONRF3-204ENST00000439603 PRR15Q8IV56 129 aa13□□□□□ -0.33
LONRF3-204ENST00000439603 A0A1B0GVX0 72 aa12.99□□□□□ -0.33
LONRF3-204ENST00000439603 IGHV6-1A0A0B4J1U7 121 aa12.97□□□□□ -0.33
LONRF3-204ENST00000439603 PRR4Q16378 134 aa12.97□□□□□ -0.33
LONRF3-204ENST00000439603 IGLV7-46A0A075B6I9 117 aa12.95□□□□□ -0.34
LONRF3-204ENST00000439603 HIST1H4AP62805 103 aaKnown RBP12.95□□□□□ -0.34
LONRF3-204ENST00000439603 IMUPQ9GZP8 106 aa12.95□□□□□ -0.34
LONRF3-204ENST00000439603 NOTCH2NLQ7Z3S9 236 aa12.89□□□□□ -0.35
LONRF3-204ENST00000439603 ANAPC13Q9BS18 74 aa12.88□□□□□ -0.35
LONRF3-204ENST00000439603 C8orf17Q9NRJ1 99 aa12.88□□□□□ -0.35
LONRF3-204ENST00000439603 C8orf87E5RJ46 101 aa12.87□□□□□ -0.35
LONRF3-204ENST00000439603 LINC00313P59037 77 aa12.87□□□□□ -0.35
LONRF3-204ENST00000439603 A0A087WVE0 104 aa12.85□□□□□ -0.35
LONRF3-204ENST00000439603 C9orf92A6NGG3 77 aa12.85□□□□□ -0.35
LONRF3-204ENST00000439603 HERC1Q15751 4861 aa12.84□□□□□ -0.35
LONRF3-204ENST00000439603 MMP24-AS1A0A0U1RRL7 71 aa12.84□□□□□ -0.35
LONRF3-204ENST00000439603 HCG22E2RYF7 251 aa12.81□□□□□ -0.36
LONRF3-204ENST00000439603 KRTAP13-3Q3SY46 172 aa12.81□□□□□ -0.36
LONRF3-204ENST00000439603 WFDC13Q8IUB5 93 aa12.79□□□□□ -0.36
LONRF3-204ENST00000439603 hDV103S1A0JD37 113 aa12.78□□□□□ -0.36
LONRF3-204ENST00000439603 TPRXLQ17RH7 258 aa12.78□□□□□ -0.36
LONRF3-204ENST00000439603 CASC2Q6XLA1 102 aa12.78□□□□□ -0.36
LONRF3-204ENST00000439603 KRTAP16-1A8MUX0 517 aa12.75□□□□□ -0.37
LONRF3-204ENST00000439603 FAM236AA0A1B0GUQ0 79 aa12.73□□□□□ -0.37
LONRF3-204ENST00000439603 FAM236BA0A1B0GV22 79 aa12.73□□□□□ -0.37
LONRF3-204ENST00000439603 TMEM254Q8TBM7 123 aa12.73□□□□□ -0.37
LONRF3-204ENST00000439603 MRPL34Q9BQ48 92 aaKnown RBP12.72□□□□□ -0.37
LONRF3-204ENST00000439603 LPAP08519 4548 aa12.68□□□□□ -0.38
LONRF3-204ENST00000439603 XP32Q5T750 250 aa12.65□□□□□ -0.38
LONRF3-204ENST00000439603 Q8N9P0 234 aaPredicted RBP12.65□□□□□ -0.38
LONRF3-204ENST00000439603 C20orf166-AS1Q96NR2 134 aa12.63□□□□□ -0.39
LONRF3-204ENST00000439603 HMCN2Q8NDA2 5059 aa12.62□□□□□ -0.39
LONRF3-204ENST00000439603 CCDC179H3BU77 68 aa12.62□□□□□ -0.39
LONRF3-204ENST00000439603 A8MUU9 505 aa12.61□□□□□ -0.39
LONRF3-204ENST00000439603 NDUFS5O43920 106 aa12.61□□□□□ -0.39
LONRF3-204ENST00000439603 ATOX1O00244 68 aa12.59□□□□□ -0.39
LONRF3-204ENST00000439603 Q75L30 129 aa12.58□□□□□ -0.4
LONRF3-204ENST00000439603 RPL37P61927 97 aaKnown RBP12.53□□□□□ -0.4
LONRF3-204ENST00000439603 LRP2P98164 4655 aa12.53□□□□□ -0.4
LONRF3-204ENST00000439603 UQCRQO14949 82 aa12.51□□□□□ -0.41
LONRF3-204ENST00000439603 TP53AIP1Q9HCN2 124 aa12.51□□□□□ -0.41
LONRF3-204ENST00000439603 COX7CP15954 63 aa12.48□□□□□ -0.41
LONRF3-204ENST00000439603 OCR1Q9BZK8 76 aa12.48□□□□□ -0.41
LONRF3-204ENST00000439603 ATP11AUNQ6ZP68 121 aa12.44□□□□□ -0.42
LONRF3-204ENST00000439603 SERP2Q8N6R1 65 aa12.43□□□□□ -0.42
LONRF3-204ENST00000439603 ZCCHC13Q8WW36 166 aaKnown RBP12.43□□□□□ -0.42
LONRF3-204ENST00000439603 SMIM20Q8N5G0 67 aa12.42□□□□□ -0.42
LONRF3-204ENST00000439603 Q5W150 140 aa12.4□□□□□ -0.42
LONRF3-204ENST00000439603 TRAV7A0A075B6U4 112 aa12.38□□□□□ -0.43
LONRF3-204ENST00000439603 SEC61BP60468 96 aaKnown RBP12.36□□□□□ -0.43
LONRF3-204ENST00000439603 PCOTHQ58A44 107 aa12.36□□□□□ -0.43
LONRF3-204ENST00000439603 TRAV22A0A0B4J277 110 aa12.34□□□□□ -0.43
LONRF3-204ENST00000439603 C5orf47Q569G3 176 aa12.31□□□□□ -0.44
LONRF3-204ENST00000439603 H0Y9P7 68 aa12.29□□□□□ -0.44
LONRF3-204ENST00000439603 MP68P56378 58 aa12.25□□□□□ -0.45
LONRF3-204ENST00000439603 MUC17Q685J3 4493 aa12.25□□□□□ -0.45
LONRF3-204ENST00000439603 LINC00208Q96KT6 92 aa12.19□□□□□ -0.46
LONRF3-204ENST00000439603 CYSTM1Q9H1C7 97 aa12.19□□□□□ -0.46
LONRF3-204ENST00000439603 C1orf64Q8NEQ6 169 aa12.18□□□□□ -0.46
LONRF3-204ENST00000439603 IGKV2D-30A0A075B6S6 120 aa12.17□□□□□ -0.46
LONRF3-204ENST00000439603 H3BPC8 53 aa12.17□□□□□ -0.46
LONRF3-204ENST00000439603 IGKV2-30P06310 120 aa12.17□□□□□ -0.46
LONRF3-204ENST00000439603 SPINK7P58062 85 aa12.16□□□□□ -0.46
LONRF3-204ENST00000439603 LOC101927531A0A1B0GV80 90 aa12.15□□□□□ -0.46
LONRF3-204ENST00000439603 C7orf65Q6ZTY9 151 aa12.14□□□□□ -0.47
LONRF3-204ENST00000439603 SVIPQ8NHG7 77 aa12.14□□□□□ -0.47
LONRF3-204ENST00000439603 TMEM258P61165 79 aa12.12□□□□□ -0.47
LONRF3-204ENST00000439603 C20orf197Q8N268 126 aa12.12□□□□□ -0.47
LONRF3-204ENST00000439603 CYP4F30PQ9H0H9 118 aa12.11□□□□□ -0.47
LONRF3-204ENST00000439603 A0A0U1RQV1 116 aa12.1□□□□□ -0.47
LONRF3-204ENST00000439603 KRTAP4-1Q9BYQ7 146 aa12.1□□□□□ -0.47
LONRF3-204ENST00000439603 KLKP1Q107X0 134 aa12.07□□□□□ -0.48
LONRF3-204ENST00000439603 SNURFQ9Y675 71 aa12.07□□□□□ -0.48
LONRF3-204ENST00000439603 UBR4Q5T4S7 5183 aa12.07□□□□□ -0.48
LONRF3-204ENST00000439603 H7BZZ5 65 aa11.98□□□□□ -0.49
LONRF3-204ENST00000439603 RPS28P62857 69 aaKnown RBP11.98□□□□□ -0.49
LONRF3-204ENST00000439603 HRES1P13985 223 aa11.96□□□□□ -0.49
LONRF3-204ENST00000439603 NDUFC1O43677 76 aa11.95□□□□□ -0.5
LONRF3-204ENST00000439603 MUC2Q02817 5179 aa11.95□□□□□ -0.5
LONRF3-204ENST00000439603 RNF213Q63HN8 5207 aa11.9□□□□□ -0.5
LONRF3-204ENST00000439603 FAM236DA0A1B0GTK5 79 aa11.89□□□□□ -0.51
LONRF3-204ENST00000439603 FAM236CP0DP71 79 aa11.89□□□□□ -0.51
LONRF3-204ENST00000439603 C4orf26Q17RF5 130 aa11.88□□□□□ -0.51
LONRF3-204ENST00000439603 MPLKIPQ8TAP9 179 aa11.87□□□□□ -0.51
LONRF3-204ENST00000439603 RBM12B-AS1Q9P1G2 102 aa11.83□□□□□ -0.52
LONRF3-204ENST00000439603 ATP5EP56381 51 aaPredicted RBP11.79□□□□□ -0.52
LONRF3-204ENST00000439603 COX6B2Q6YFQ2 88 aa11.78□□□□□ -0.52
LONRF3-204ENST00000439603 SERP1Q9Y6X1 66 aa11.76□□□□□ -0.53
LONRF3-204ENST00000439603 SPANXA2-OT1Q8N9U9 137 aa11.73□□□□□ -0.53
LONRF3-204ENST00000439603 KRTAP3-1Q9BYR8 98 aa11.72□□□□□ -0.53
LONRF3-204ENST00000439603 KRTAP19-2Q3LHN2 52 aa11.7□□□□□ -0.54
LONRF3-204ENST00000439603 A8MUN3 132 aa11.64□□□□□ -0.55
LONRF3-204ENST00000439603 DMAC1Q96GE9 116 aa11.64□□□□□ -0.55
LONRF3-204ENST00000439603 H1FX-AS1Q4G0G2 97 aa11.61□□□□□ -0.55
LONRF3-204ENST00000439603 LCE2CQ5TA81 110 aa11.58□□□□□ -0.56
LONRF3-204ENST00000439603 ACYP2P14621 99 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms