RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 NOTCH2NLQ7Z3S9 236 aa11.11□□□□□ -0.63
CHRNA7-202ENST00000437966 MMP24-AS1A0A0U1RRL7 71 aa11.1□□□□□ -0.63
CHRNA7-202ENST00000437966 CCDC179H3BU77 68 aa11.1□□□□□ -0.63
CHRNA7-202ENST00000437966 KRTAP10-8P60410 259 aa11.08□□□□□ -0.64
CHRNA7-202ENST00000437966 CASC2Q6XLA1 102 aa11.08□□□□□ -0.64
CHRNA7-202ENST00000437966 KRTAP4-5Q9BYR2 181 aa11.08□□□□□ -0.64
CHRNA7-202ENST00000437966 KRTAP29-1A8MX34 341 aaPredicted RBP11.08□□□□□ -0.64
CHRNA7-202ENST00000437966 C8orf17Q9NRJ1 99 aa11.08□□□□□ -0.64
CHRNA7-202ENST00000437966 SERP2Q8N6R1 65 aa11.07□□□□□ -0.64
CHRNA7-202ENST00000437966 FLG2Q5D862 2391 aaPredicted RBP11.04□□□□□ -0.64
CHRNA7-202ENST00000437966 COX7CP15954 63 aa11.04□□□□□ -0.64
CHRNA7-202ENST00000437966 RPS29P62273 56 aaKnown RBP11.03□□□□□ -0.64
CHRNA7-202ENST00000437966 TRAV7A0A075B6U4 112 aa11.03□□□□□ -0.64
CHRNA7-202ENST00000437966 hDV103S1A0JD37 113 aa11.03□□□□□ -0.64
CHRNA7-202ENST00000437966 OCR1Q9BZK8 76 aa11.03□□□□□ -0.64
CHRNA7-202ENST00000437966 BIRC6Q9NR09 4857 aa11.03□□□□□ -0.64
CHRNA7-202ENST00000437966 MYCBP2O75592 4640 aa11.02□□□□□ -0.65
CHRNA7-202ENST00000437966 SMIM20Q8N5G0 67 aa11□□□□□ -0.65
CHRNA7-202ENST00000437966 RETNLBQ9BQ08 111 aa11□□□□□ -0.65
CHRNA7-202ENST00000437966 UQCRQO14949 82 aa10.98□□□□□ -0.65
CHRNA7-202ENST00000437966 MT1HL1P0DM35 61 aa10.95□□□□□ -0.66
CHRNA7-202ENST00000437966 LINC00313P59037 77 aa10.95□□□□□ -0.66
CHRNA7-202ENST00000437966 C8orf87E5RJ46 101 aa10.92□□□□□ -0.66
CHRNA7-202ENST00000437966 MRPL34Q9BQ48 92 aaKnown RBP10.92□□□□□ -0.66
CHRNA7-202ENST00000437966 ABCA13Q86UQ4 5058 aa10.91□□□□□ -0.66
CHRNA7-202ENST00000437966 NDUFS5O43920 106 aa10.91□□□□□ -0.66
CHRNA7-202ENST00000437966 C20orf197Q8N268 126 aa10.91□□□□□ -0.66
CHRNA7-202ENST00000437966 TMEM254Q8TBM7 123 aa10.91□□□□□ -0.66
CHRNA7-202ENST00000437966 HERC2O95714 4834 aa10.9□□□□□ -0.66
CHRNA7-202ENST00000437966 CYSTM1Q9H1C7 97 aa10.89□□□□□ -0.67
CHRNA7-202ENST00000437966 SNURFQ9Y675 71 aa10.88□□□□□ -0.67
CHRNA7-202ENST00000437966 KRTAP16-1A8MUX0 517 aa10.84□□□□□ -0.67
CHRNA7-202ENST00000437966 C9orf92A6NGG3 77 aa10.83□□□□□ -0.68
CHRNA7-202ENST00000437966 OXTP01178 125 aa10.82□□□□□ -0.68
CHRNA7-202ENST00000437966 DMBT1Q9UGM3 2413 aaPredicted RBP10.82□□□□□ -0.68
CHRNA7-202ENST00000437966 C5orf47Q569G3 176 aa10.79□□□□□ -0.68
CHRNA7-202ENST00000437966 A0A0U1RQV1 116 aa10.78□□□□□ -0.68
CHRNA7-202ENST00000437966 H0Y9P7 68 aa10.78□□□□□ -0.68
CHRNA7-202ENST00000437966 TP53AIP1Q9HCN2 124 aa10.77□□□□□ -0.68
CHRNA7-202ENST00000437966 Q8N9P0 234 aaPredicted RBP10.75□□□□□ -0.69
CHRNA7-202ENST00000437966 KLKP1Q107X0 134 aa10.75□□□□□ -0.69
CHRNA7-202ENST00000437966 Q5W150 140 aa10.75□□□□□ -0.69
CHRNA7-202ENST00000437966 MP68P56378 58 aa10.73□□□□□ -0.69
CHRNA7-202ENST00000437966 LINC00208Q96KT6 92 aa10.73□□□□□ -0.69
CHRNA7-202ENST00000437966 TRAV22A0A0B4J277 110 aa10.72□□□□□ -0.69
CHRNA7-202ENST00000437966 ZCCHC13Q8WW36 166 aaKnown RBP10.69□□□□□ -0.7
CHRNA7-202ENST00000437966 C1orf64Q8NEQ6 169 aa10.67□□□□□ -0.7
CHRNA7-202ENST00000437966 IGLV7-46A0A075B6I9 117 aa10.67□□□□□ -0.7
CHRNA7-202ENST00000437966 H7BZZ5 65 aa10.66□□□□□ -0.7
CHRNA7-202ENST00000437966 KRTAP13-3Q3SY46 172 aa10.65□□□□□ -0.7
CHRNA7-202ENST00000437966 FP248Q71RG6 208 aaPredicted RBP10.65□□□□□ -0.7
CHRNA7-202ENST00000437966 PRR4Q16378 134 aa10.65□□□□□ -0.71
CHRNA7-202ENST00000437966 J3QL48 77 aa10.63□□□□□ -0.71
CHRNA7-202ENST00000437966 H3BPC8 53 aa10.6□□□□□ -0.71
CHRNA7-202ENST00000437966 A8MUU9 505 aa10.59□□□□□ -0.71
CHRNA7-202ENST00000437966 C20orf166-AS1Q96NR2 134 aa10.58□□□□□ -0.72
CHRNA7-202ENST00000437966 NDUFC1O43677 76 aa10.57□□□□□ -0.72
CHRNA7-202ENST00000437966 PCOTHQ58A44 107 aa10.55□□□□□ -0.72
CHRNA7-202ENST00000437966 TMEM258P61165 79 aa10.54□□□□□ -0.72
CHRNA7-202ENST00000437966 PCLOQ9Y6V0 5065 aa10.52□□□□□ -0.73
CHRNA7-202ENST00000437966 LOC101927531A0A1B0GV80 90 aa10.49□□□□□ -0.73
CHRNA7-202ENST00000437966 XP32Q5T750 250 aa10.49□□□□□ -0.73
CHRNA7-202ENST00000437966 FAM236DA0A1B0GTK5 79 aa10.49□□□□□ -0.73
CHRNA7-202ENST00000437966 FAM236CP0DP71 79 aa10.49□□□□□ -0.73
CHRNA7-202ENST00000437966 CYP4F30PQ9H0H9 118 aa10.49□□□□□ -0.73
CHRNA7-202ENST00000437966 Q75L30 129 aa10.48□□□□□ -0.73
CHRNA7-202ENST00000437966 IGKV2D-30A0A075B6S6 120 aa10.47□□□□□ -0.73
CHRNA7-202ENST00000437966 IGKV2-30P06310 120 aa10.47□□□□□ -0.73
CHRNA7-202ENST00000437966 LPAP08519 4548 aa10.45□□□□□ -0.74
CHRNA7-202ENST00000437966 RPL37P61927 97 aaKnown RBP10.41□□□□□ -0.74
CHRNA7-202ENST00000437966 TPRXLQ17RH7 258 aa10.39□□□□□ -0.75
CHRNA7-202ENST00000437966 ATP11AUNQ6ZP68 121 aa10.37□□□□□ -0.75
CHRNA7-202ENST00000437966 HRES1P13985 223 aa10.35□□□□□ -0.75
CHRNA7-202ENST00000437966 C7orf65Q6ZTY9 151 aa10.33□□□□□ -0.76
CHRNA7-202ENST00000437966 SPANXA2-OT1Q8N9U9 137 aa10.33□□□□□ -0.76
CHRNA7-202ENST00000437966 LRP2P98164 4655 aa10.33□□□□□ -0.76
CHRNA7-202ENST00000437966 ATP5EP56381 51 aaPredicted RBP10.32□□□□□ -0.76
CHRNA7-202ENST00000437966 SPINK7P58062 85 aa10.29□□□□□ -0.76
CHRNA7-202ENST00000437966 HERC1Q15751 4861 aa10.28□□□□□ -0.76
CHRNA7-202ENST00000437966 SERP1Q9Y6X1 66 aa10.24□□□□□ -0.77
CHRNA7-202ENST00000437966 C4orf26Q17RF5 130 aa10.21□□□□□ -0.78
CHRNA7-202ENST00000437966 RPS28P62857 69 aaKnown RBP10.19□□□□□ -0.78
CHRNA7-202ENST00000437966 HMCN2Q8NDA2 5059 aa10.14□□□□□ -0.79
CHRNA7-202ENST00000437966 DMAC1Q96GE9 116 aa10.13□□□□□ -0.79
CHRNA7-202ENST00000437966 COA5Q86WW8 74 aa10.11□□□□□ -0.79
CHRNA7-202ENST00000437966 ACYP2P14621 99 aa10.08□□□□□ -0.8
CHRNA7-202ENST00000437966 KRTAP3-1Q9BYR8 98 aa10.07□□□□□ -0.8
CHRNA7-202ENST00000437966 SEC61BP60468 96 aaKnown RBP10.04□□□□□ -0.8
CHRNA7-202ENST00000437966 MUC17Q685J3 4493 aa10.03□□□□□ -0.8
CHRNA7-202ENST00000437966 COX6B2Q6YFQ2 88 aa10□□□□□ -0.81
CHRNA7-202ENST00000437966 KRTAP4-1Q9BYQ7 146 aa9.98□□□□□ -0.81
CHRNA7-202ENST00000437966 SMIM26A0A096LP01 95 aa9.97□□□□□ -0.81
CHRNA7-202ENST00000437966 CHKB-CPT1BH3BT56 60 aa9.96□□□□□ -0.82
CHRNA7-202ENST00000437966 A8MUN3 132 aa9.95□□□□□ -0.82
CHRNA7-202ENST00000437966 MPLKIPQ8TAP9 179 aa9.93□□□□□ -0.82
CHRNA7-202ENST00000437966 RBM12B-AS1Q9P1G2 102 aa9.82□□□□□ -0.84
CHRNA7-202ENST00000437966 MUC2Q02817 5179 aa9.81□□□□□ -0.84
CHRNA7-202ENST00000437966 SVIPQ8NHG7 77 aa9.78□□□□□ -0.84
CHRNA7-202ENST00000437966 Q1T7F1 81 aa9.77□□□□□ -0.85
CHRNA7-202ENST00000437966 H1FX-AS1Q4G0G2 97 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms