RNA–Protein interactions for RNA: ENST00000437941.6

SSX2IP-203, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2 BASIC

Gene SSX2IP, Length 5,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-203ENST00000437941 DMXL2Q8TDJ6 3036 aa11.92□□□□□ -0.5
SSX2IP-203ENST00000437941 KRTAP25-1Q3LHN0 102 aa11.91□□□□□ -0.5
SSX2IP-203ENST00000437941 KALRNO60229 2985 aa11.9□□□□□ -0.5
SSX2IP-203ENST00000437941 FRYLO94915 3013 aa11.9□□□□□ -0.51
SSX2IP-203ENST00000437941 LRBAP50851 2863 aa11.89□□□□□ -0.51
SSX2IP-203ENST00000437941 TPRXLQ17RH7 258 aa11.84□□□□□ -0.51
SSX2IP-203ENST00000437941 A0A1B0GVY2 172 aa11.8□□□□□ -0.52
SSX2IP-203ENST00000437941 CDH23Q9H251 3354 aa11.79□□□□□ -0.52
SSX2IP-203ENST00000437941 A6NN06 94 aa11.78□□□□□ -0.52
SSX2IP-203ENST00000437941 LAMA1P25391 3075 aa11.77□□□□□ -0.52
SSX2IP-203ENST00000437941 KRTAP10-8P60410 259 aa11.77□□□□□ -0.53
SSX2IP-203ENST00000437941 ASH1LQ9NR48 2969 aaKnown RBP11.76□□□□□ -0.53
SSX2IP-203ENST00000437941 CELSR3Q9NYQ7 3312 aa11.75□□□□□ -0.53
SSX2IP-203ENST00000437941 FREM2Q5SZK8 3169 aa11.74□□□□□ -0.53
SSX2IP-203ENST00000437941 CELSR2Q9HCU4 2923 aa11.73□□□□□ -0.53
SSX2IP-203ENST00000437941 ADGRG4Q8IZF6 3080 aa11.68□□□□□ -0.54
SSX2IP-203ENST00000437941 EYSQ5T1H1 3165 aa11.67□□□□□ -0.54
SSX2IP-203ENST00000437941 ZZEF1O43149 2961 aa11.64□□□□□ -0.55
SSX2IP-203ENST00000437941 KRTAP10-10P60014 251 aa11.64□□□□□ -0.55
SSX2IP-203ENST00000437941 DCHS2Q6V1P9 2916 aa11.61□□□□□ -0.55
SSX2IP-203ENST00000437941 BOD1L1Q8NFC6 3051 aa11.59□□□□□ -0.55
SSX2IP-203ENST00000437941 C10orf95Q9H7T3 257 aa11.59□□□□□ -0.55
SSX2IP-203ENST00000437941 NBEAQ8NFP9 2946 aa11.57□□□□□ -0.56
SSX2IP-203ENST00000437941 PP632Q6XCG6 107 aa11.57□□□□□ -0.56
SSX2IP-203ENST00000437941 KRTAP13-3Q3SY46 172 aa11.56□□□□□ -0.56
SSX2IP-203ENST00000437941 SZT2Q5T011 3432 aa11.56□□□□□ -0.56
SSX2IP-203ENST00000437941 TENM3Q9P273 2699 aa11.52□□□□□ -0.57
SSX2IP-203ENST00000437941 KRTAP16-1A8MUX0 517 aa11.51□□□□□ -0.57
SSX2IP-203ENST00000437941 PRO2289Q9P1D8 64 aa11.5□□□□□ -0.57
SSX2IP-203ENST00000437941 TENM1Q9UKZ4 2725 aa11.49□□□□□ -0.57
SSX2IP-203ENST00000437941 COL6A3P12111 3177 aa11.45□□□□□ -0.58
SSX2IP-203ENST00000437941 VCANP13611 3396 aa11.43□□□□□ -0.58
SSX2IP-203ENST00000437941 TENM2Q9NT68 2774 aa11.43□□□□□ -0.58
SSX2IP-203ENST00000437941 ZANQ9Y493 2812 aa11.42□□□□□ -0.58
SSX2IP-203ENST00000437941 NDUFAF8A1L188 74 aa11.41□□□□□ -0.58
SSX2IP-203ENST00000437941 CFAP47Q6ZTR5 3102 aa11.37□□□□□ -0.59
SSX2IP-203ENST00000437941 NF1P21359 2839 aa11.37□□□□□ -0.59
SSX2IP-203ENST00000437941 TNRC18O15417 2968 aaPredicted RBP11.29□□□□□ -0.6
SSX2IP-203ENST00000437941 H0YAA0 97 aa11.27□□□□□ -0.61
SSX2IP-203ENST00000437941 P0C880 135 aa11.2□□□□□ -0.62
SSX2IP-203ENST00000437941 HRNRQ86YZ3 2850 aaPredicted RBP11.16□□□□□ -0.62
SSX2IP-203ENST00000437941 DNAH14Q0VDD8 3507 aa11.15□□□□□ -0.62
SSX2IP-203ENST00000437941 DMXL1Q9Y485 3027 aa11.12□□□□□ -0.63
SSX2IP-203ENST00000437941 USP34Q70CQ2 3546 aa11.11□□□□□ -0.63
SSX2IP-203ENST00000437941 FBN2P35556 2912 aa11.1□□□□□ -0.63
SSX2IP-203ENST00000437941 MXRA5Q9NR99 2828 aa11.04□□□□□ -0.64
SSX2IP-203ENST00000437941 SPEGQ15772 3267 aa11.04□□□□□ -0.64
SSX2IP-203ENST00000437941 PKD1L1Q8TDX9 2849 aa11.01□□□□□ -0.65
SSX2IP-203ENST00000437941 CELSR1Q9NYQ6 3014 aa11□□□□□ -0.65
SSX2IP-203ENST00000437941 TGP01266 2768 aa10.92□□□□□ -0.66
SSX2IP-203ENST00000437941 SPTBN5Q9NRC6 3674 aaKnown RBP10.84□□□□□ -0.67
SSX2IP-203ENST00000437941 VWFP04275 2813 aa10.78□□□□□ -0.68
SSX2IP-203ENST00000437941 PDZD2O15018 2839 aa10.75□□□□□ -0.69
SSX2IP-203ENST00000437941 KRTAP12-2P59991 146 aa10.69□□□□□ -0.7
SSX2IP-203ENST00000437941 LOC400499M0QZD8 3231 aa10.68□□□□□ -0.7
SSX2IP-203ENST00000437941 KRTAP13-4Q3LI77 160 aa10.64□□□□□ -0.71
SSX2IP-203ENST00000437941 KRTAP12-1P59990 96 aa10.52□□□□□ -0.73
SSX2IP-203ENST00000437941 DCHS1Q96JQ0 3298 aa10.51□□□□□ -0.73
SSX2IP-203ENST00000437941 MYO15AQ9UKN7 3530 aa10.5□□□□□ -0.73
SSX2IP-203ENST00000437941 KRTAP3-1Q9BYR8 98 aa10.49□□□□□ -0.73
SSX2IP-203ENST00000437941 MT1HL1P0DM35 61 aa10.36□□□□□ -0.75
SSX2IP-203ENST00000437941 OTOGQ6ZRI0 2925 aa10.35□□□□□ -0.75
SSX2IP-203ENST00000437941 SRRM2Q9UQ35 2752 aaKnown RBP10.34□□□□□ -0.75
SSX2IP-203ENST00000437941 RELNP78509 3460 aa10.33□□□□□ -0.76
SSX2IP-203ENST00000437941 WDFY3Q8IZQ1 3526 aa10.32□□□□□ -0.76
SSX2IP-203ENST00000437941 KRTAP15-1Q3LI76 137 aa10.3□□□□□ -0.76
SSX2IP-203ENST00000437941 FBN1P35555 2871 aaKnown RBP10.29□□□□□ -0.76
SSX2IP-203ENST00000437941 NBPF19A0A087WUL8 3843 aa10.27□□□□□ -0.76
SSX2IP-203ENST00000437941 FBN3Q75N90 2809 aa10.21□□□□□ -0.78
SSX2IP-203ENST00000437941 KRTAP10-6P60371 365 aaPredicted RBP10.17□□□□□ -0.78
SSX2IP-203ENST00000437941 ZFHX3Q15911 3703 aa10.09□□□□□ -0.79
SSX2IP-203ENST00000437941 KRTAP4-5Q9BYR2 181 aa10.08□□□□□ -0.8
SSX2IP-203ENST00000437941 ANK3Q12955 4377 aaKnown RBP10.04□□□□□ -0.8
SSX2IP-203ENST00000437941 MEGF8Q7Z7M0 2845 aa9.97□□□□□ -0.81
SSX2IP-203ENST00000437941 KRTAP10-4P60372 401 aaPredicted RBP9.96□□□□□ -0.81
SSX2IP-203ENST00000437941 ZFHX4Q86UP3 3567 aa9.94□□□□□ -0.82
SSX2IP-203ENST00000437941 KRTAP10-12P60413 245 aa9.92□□□□□ -0.82
SSX2IP-203ENST00000437941 ASPMQ8IZT6 3477 aa9.92□□□□□ -0.82
SSX2IP-203ENST00000437941 COL7A1Q02388 2944 aa9.9□□□□□ -0.83
SSX2IP-203ENST00000437941 KRTAP3-3Q9BYR6 98 aa9.81□□□□□ -0.84
SSX2IP-203ENST00000437941 LAMA5O15230 3695 aa9.8□□□□□ -0.84
SSX2IP-203ENST00000437941 KRTAP3-2Q9BYR7 98 aa9.78□□□□□ -0.84
SSX2IP-203ENST00000437941 CRCT1Q9UGL9 99 aa9.78□□□□□ -0.84
SSX2IP-203ENST00000437941 KRTAP12-3P60328 96 aa9.58□□□□□ -0.88
SSX2IP-203ENST00000437941 TRRAPQ9Y4A5 3859 aa9.56□□□□□ -0.88
SSX2IP-203ENST00000437941 HUWE1Q7Z6Z7 4374 aaKnown RBP9.54□□□□□ -0.88
SSX2IP-203ENST00000437941 ALMS1Q8TCU4 4167 aa9.51□□□□□ -0.89
SSX2IP-203ENST00000437941 CSMD2Q7Z408 3487 aa9.5□□□□□ -0.89
SSX2IP-203ENST00000437941 CSMD1Q96PZ7 3565 aa9.5□□□□□ -0.89
SSX2IP-203ENST00000437941 LCE3AQ5TA76 89 aa9.4□□□□□ -0.9
SSX2IP-203ENST00000437941 KRTAP23-1A1A580 65 aa9.4□□□□□ -0.9
SSX2IP-203ENST00000437941 INE1O15225 51 aa9.38□□□□□ -0.91
SSX2IP-203ENST00000437941 KRTAP8-1Q8IUC2 63 aa9.35□□□□□ -0.91
SSX2IP-203ENST00000437941 LORP23490 312 aaPredicted RBP9.32□□□□□ -0.92
SSX2IP-203ENST00000437941 SMG1Q96Q15 3661 aaKnown RBP9.3□□□□□ -0.92
SSX2IP-203ENST00000437941 DMDP11532 3685 aa9.3□□□□□ -0.92
SSX2IP-203ENST00000437941 MUC3AQ02505 3323 aa9.28□□□□□ -0.92
SSX2IP-203ENST00000437941 CUBNO60494 3623 aa9.15□□□□□ -0.95
SSX2IP-203ENST00000437941 SVEP1Q4LDE5 3571 aa9.14□□□□□ -0.95
SSX2IP-203ENST00000437941 SPENQ96T58 3664 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms