RNA–Protein interactions for RNA: ENST00000437844.6

ZEB1-204, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,246 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-204ENST00000437844 PRO0461Q9UI25 63 aa3.66□□□□□ -1.82
ZEB1-204ENST00000437844 LINC00472Q9H8W2 130 aa3.66□□□□□ -1.82
ZEB1-204ENST00000437844 APCP25054 2843 aa3.66□□□□□ -1.82
ZEB1-204ENST00000437844 CFAP47Q6ZTR5 3102 aa3.65□□□□□ -1.82
ZEB1-204ENST00000437844 LINC01558Q9Y6Z2 57 aa3.65□□□□□ -1.83
ZEB1-204ENST00000437844 A0A087X002 238 aa3.64□□□□□ -1.83
ZEB1-204ENST00000437844 TENM3Q9P273 2699 aa3.64□□□□□ -1.83
ZEB1-204ENST00000437844 MGAQ8IWI9 3026 aa3.63□□□□□ -1.83
ZEB1-204ENST00000437844 CSMD1Q96PZ7 3565 aa3.63□□□□□ -1.83
ZEB1-204ENST00000437844 FBN2P35556 2912 aa3.63□□□□□ -1.83
ZEB1-204ENST00000437844 OCR1Q9BZK8 76 aa3.63□□□□□ -1.83
ZEB1-204ENST00000437844 DMXL1Q9Y485 3027 aa3.62□□□□□ -1.83
ZEB1-204ENST00000437844 RELNP78509 3460 aa3.61□□□□□ -1.83
ZEB1-204ENST00000437844 LAMA5O15230 3695 aa3.6□□□□□ -1.83
ZEB1-204ENST00000437844 PDZD2O15018 2839 aa3.58□□□□□ -1.84
ZEB1-204ENST00000437844 A0A1B0GVY2 172 aa3.58□□□□□ -1.84
ZEB1-204ENST00000437844 SVEP1Q4LDE5 3571 aa3.58□□□□□ -1.84
ZEB1-204ENST00000437844 KRTAP29-1A8MX34 341 aaPredicted RBP3.58□□□□□ -1.84
ZEB1-204ENST00000437844 DMXL2Q8TDJ6 3036 aa3.57□□□□□ -1.84
ZEB1-204ENST00000437844 KRTAP26-1Q6PEX3 210 aa3.56□□□□□ -1.84
ZEB1-204ENST00000437844 PRRC2CQ9Y520 2896 aaKnown RBP3.56□□□□□ -1.84
ZEB1-204ENST00000437844 ASB16-AS1Q495Z4 193 aa3.56□□□□□ -1.84
ZEB1-204ENST00000437844 BOD1L1Q8NFC6 3051 aa3.55□□□□□ -1.84
ZEB1-204ENST00000437844 Q6ZRN7 208 aaPredicted RBP3.54□□□□□ -1.84
ZEB1-204ENST00000437844 ATMQ13315 3056 aa3.53□□□□□ -1.84
ZEB1-204ENST00000437844 H3BS24 57 aa3.53□□□□□ -1.84
ZEB1-204ENST00000437844 TPRXLQ17RH7 258 aa3.53□□□□□ -1.84
ZEB1-204ENST00000437844 C10orf95Q9H7T3 257 aa3.52□□□□□ -1.85
ZEB1-204ENST00000437844 PP632Q6XCG6 107 aa3.52□□□□□ -1.85
ZEB1-204ENST00000437844 TENM2Q9NT68 2774 aa3.52□□□□□ -1.85
ZEB1-204ENST00000437844 OTOGQ6ZRI0 2925 aa3.52□□□□□ -1.85
ZEB1-204ENST00000437844 KALRNO60229 2985 aa3.51□□□□□ -1.85
ZEB1-204ENST00000437844 Q5XG85 94 aa3.51□□□□□ -1.85
ZEB1-204ENST00000437844 ZFHX3Q15911 3703 aa3.5□□□□□ -1.85
ZEB1-204ENST00000437844 NOTCH2NLQ7Z3S9 236 aa3.5□□□□□ -1.85
ZEB1-204ENST00000437844 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
ZEB1-204ENST00000437844 KRTAP13-2Q52LG2 175 aa3.47□□□□□ -1.85
ZEB1-204ENST00000437844 CUBNO60494 3623 aa3.47□□□□□ -1.85
ZEB1-204ENST00000437844 KRTAP4-16G5E9R7 235 aaPredicted RBP3.47□□□□□ -1.85
ZEB1-204ENST00000437844 XP32Q5T750 250 aa3.46□□□□□ -1.86
ZEB1-204ENST00000437844 TENM1Q9UKZ4 2725 aa3.45□□□□□ -1.86
ZEB1-204ENST00000437844 TACC2O95359 2948 aa3.45□□□□□ -1.86
ZEB1-204ENST00000437844 COL12A1Q99715 3063 aa3.43□□□□□ -1.86
ZEB1-204ENST00000437844 Q5VV11 94 aa3.42□□□□□ -1.86
ZEB1-204ENST00000437844 KRTAP16-1A8MUX0 517 aa3.42□□□□□ -1.86
ZEB1-204ENST00000437844 ADGRG4Q8IZF6 3080 aa3.41□□□□□ -1.86
ZEB1-204ENST00000437844 KRTAP25-1Q3LHN0 102 aa3.41□□□□□ -1.86
ZEB1-204ENST00000437844 ZZEF1O43149 2961 aa3.4□□□□□ -1.86
ZEB1-204ENST00000437844 ANK3Q12955 4377 aaKnown RBP3.4□□□□□ -1.86
ZEB1-204ENST00000437844 A8MU10 97 aa3.39□□□□□ -1.87
ZEB1-204ENST00000437844 ALMS1Q8TCU4 4167 aa3.38□□□□□ -1.87
ZEB1-204ENST00000437844 MXRA5Q9NR99 2828 aa3.38□□□□□ -1.87
ZEB1-204ENST00000437844 CELSR2Q9HCU4 2923 aa3.37□□□□□ -1.87
ZEB1-204ENST00000437844 NIPBLQ6KC79 2804 aaeCLIP3.37□□□□□ -1.87
ZEB1-204ENST00000437844 CSMD2Q7Z408 3487 aa3.37□□□□□ -1.87
ZEB1-204ENST00000437844 A6NN06 94 aa3.37□□□□□ -1.87
ZEB1-204ENST00000437844 VPS13CQ709C8 3753 aa3.37□□□□□ -1.87
ZEB1-204ENST00000437844 NF1P21359 2839 aa3.36□□□□□ -1.87
ZEB1-204ENST00000437844 DCHS2Q6V1P9 2916 aa3.35□□□□□ -1.87
ZEB1-204ENST00000437844 CELSR1Q9NYQ6 3014 aa3.34□□□□□ -1.87
ZEB1-204ENST00000437844 LRBAP50851 2863 aa3.34□□□□□ -1.87
ZEB1-204ENST00000437844 BSNQ9UPA5 3926 aa3.34□□□□□ -1.87
ZEB1-204ENST00000437844 CRYBG3Q68DQ2 2970 aa3.33□□□□□ -1.88
ZEB1-204ENST00000437844 NBPF19A0A087WUL8 3843 aa3.33□□□□□ -1.88
ZEB1-204ENST00000437844 KRTAP13-1Q8IUC0 172 aa3.31□□□□□ -1.88
ZEB1-204ENST00000437844 KRTAP11-1Q8IUC1 163 aa3.31□□□□□ -1.88
ZEB1-204ENST00000437844 KRTAP13-3Q3SY46 172 aa3.3□□□□□ -1.88
ZEB1-204ENST00000437844 NBEAL2Q6ZNJ1 2754 aa3.3□□□□□ -1.88
ZEB1-204ENST00000437844 FBN1P35555 2871 aaKnown RBP3.3□□□□□ -1.88
ZEB1-204ENST00000437844 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
ZEB1-204ENST00000437844 KRTAP17-1Q9BYP8 105 aa3.26□□□□□ -1.89
ZEB1-204ENST00000437844 KRTAP1-4P0C5Y4 121 aa3.26□□□□□ -1.89
ZEB1-204ENST00000437844 AKAP9Q99996 3911 aa3.25□□□□□ -1.89
ZEB1-204ENST00000437844 HRNRQ86YZ3 2850 aaPredicted RBP3.23□□□□□ -1.89
ZEB1-204ENST00000437844 KRTAP4-5Q9BYR2 181 aa3.23□□□□□ -1.89
ZEB1-204ENST00000437844 SRRM2Q9UQ35 2752 aaKnown RBP3.23□□□□□ -1.89
ZEB1-204ENST00000437844 BIRC6Q9NR09 4857 aa3.22□□□□□ -1.89
ZEB1-204ENST00000437844 PKD1L1Q8TDX9 2849 aa3.21□□□□□ -1.9
ZEB1-204ENST00000437844 H0YAA0 97 aa3.21□□□□□ -1.9
ZEB1-204ENST00000437844 ANK2Q01484 3957 aa3.19□□□□□ -1.9
ZEB1-204ENST00000437844 KRTAP7-1Q8IUC3 87 aa3.18□□□□□ -1.9
ZEB1-204ENST00000437844 DNHD1Q96M86 4753 aa3.17□□□□□ -1.9
ZEB1-204ENST00000437844 DYNC2H1Q8NCM8 4307 aaKnown RBP3.17□□□□□ -1.9
ZEB1-204ENST00000437844 KRTAP15-1Q3LI76 137 aa3.14□□□□□ -1.91
ZEB1-204ENST00000437844 CRCT1Q9UGL9 99 aa3.13□□□□□ -1.91
ZEB1-204ENST00000437844 KRTAP12-2P59991 146 aa3.12□□□□□ -1.91
ZEB1-204ENST00000437844 ZANQ9Y493 2812 aa3.11□□□□□ -1.91
ZEB1-204ENST00000437844 DNAH1Q9P2D7 4330 aa3.1□□□□□ -1.91
ZEB1-204ENST00000437844 MEGF8Q7Z7M0 2845 aa3.1□□□□□ -1.91
ZEB1-204ENST00000437844 VWFP04275 2813 aa3.09□□□□□ -1.91
ZEB1-204ENST00000437844 DNAH9Q9NYC9 4486 aa3.09□□□□□ -1.92
ZEB1-204ENST00000437844 TGP01266 2768 aa3.08□□□□□ -1.92
ZEB1-204ENST00000437844 MT1HL1P0DM35 61 aa3.08□□□□□ -1.92
ZEB1-204ENST00000437844 CYSTM1Q9H1C7 97 aa3.06□□□□□ -1.92
ZEB1-204ENST00000437844 HUWE1Q7Z6Z7 4374 aaKnown RBP3.06□□□□□ -1.92
ZEB1-204ENST00000437844 DNAH11Q96DT5 4516 aa3.06□□□□□ -1.92
ZEB1-204ENST00000437844 KRTAP13-4Q3LI77 160 aa3.04□□□□□ -1.92
ZEB1-204ENST00000437844 ZNF469Q96JG9 3925 aaPredicted RBP3.03□□□□□ -1.92
ZEB1-204ENST00000437844 LORP23490 312 aaPredicted RBP3.03□□□□□ -1.92
ZEB1-204ENST00000437844 KRTAP10-6P60371 365 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms