RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 ANKRD29Q8N6D5 301 aa5.33□□□□□ -1.56
SPTLC1P4-201ENST00000435997 PRO1854Q9UHT4 67 aa5.33□□□□□ -1.56
SPTLC1P4-201ENST00000435997 S100A6P06703 90 aa5.32□□□□□ -1.56
SPTLC1P4-201ENST00000435997 IGHV6-1A0A0B4J1U7 121 aa5.31□□□□□ -1.56
SPTLC1P4-201ENST00000435997 FXYD2P54710 66 aa5.31□□□□□ -1.56
SPTLC1P4-201ENST00000435997 DEFB116Q30KQ4 102 aa5.31□□□□□ -1.56
SPTLC1P4-201ENST00000435997 ORMDL1Q9P0S3 153 aa5.31□□□□□ -1.56
SPTLC1P4-201ENST00000435997 MACF1Q9UPN3 7388 aaKnown RBP5.31□□□□□ -1.56
SPTLC1P4-201ENST00000435997 C8orf87E5RJ46 101 aa5.3□□□□□ -1.56
SPTLC1P4-201ENST00000435997 H3BQ85 93 aa5.3□□□□□ -1.56
SPTLC1P4-201ENST00000435997 SPATA45Q537H7 98 aa5.3□□□□□ -1.56
SPTLC1P4-201ENST00000435997 PAM16Q9Y3D7 125 aa5.3□□□□□ -1.56
SPTLC1P4-201ENST00000435997 A0A1B0GV72 72 aa5.29□□□□□ -1.56
SPTLC1P4-201ENST00000435997 TMEM238LA0A1B0GVL6 79 aa5.29□□□□□ -1.56
SPTLC1P4-201ENST00000435997 TRACP01848 142 aa5.29□□□□□ -1.56
SPTLC1P4-201ENST00000435997 CCKP06307 115 aa5.29□□□□□ -1.56
SPTLC1P4-201ENST00000435997 A0A1B0GVX0 72 aa5.28□□□□□ -1.56
SPTLC1P4-201ENST00000435997 TMEM256-PLSCR3K7ERE1 68 aa5.28□□□□□ -1.56
SPTLC1P4-201ENST00000435997 DNAL4O96015 105 aa5.28□□□□□ -1.56
SPTLC1P4-201ENST00000435997 MTURNQ8N3F0 131 aa5.28□□□□□ -1.56
SPTLC1P4-201ENST00000435997 ZCCHC13Q8WW36 166 aaKnown RBP5.28□□□□□ -1.56
SPTLC1P4-201ENST00000435997 SPINK7P58062 85 aa5.27□□□□□ -1.57
SPTLC1P4-201ENST00000435997 UBE2V1Q13404 147 aa5.26□□□□□ -1.57
SPTLC1P4-201ENST00000435997 VAMP8Q9BV40 100 aa5.26□□□□□ -1.57
SPTLC1P4-201ENST00000435997 LINC00846Q9NV44 126 aa5.26□□□□□ -1.57
SPTLC1P4-201ENST00000435997 SYNE2Q8WXH0 6885 aaKnown RBP5.25□□□□□ -1.57
SPTLC1P4-201ENST00000435997 Q8N9P0 234 aaPredicted RBP5.25□□□□□ -1.57
SPTLC1P4-201ENST00000435997 A8MWP4 228 aa5.24□□□□□ -1.57
SPTLC1P4-201ENST00000435997 K7ERJ3 54 aa5.24□□□□□ -1.57
SPTLC1P4-201ENST00000435997 WFDC13Q8IUB5 93 aa5.21□□□□□ -1.58
SPTLC1P4-201ENST00000435997 J3KT08 172 aa5.2□□□□□ -1.58
SPTLC1P4-201ENST00000435997 COX6CP09669 75 aa5.2□□□□□ -1.58
SPTLC1P4-201ENST00000435997 S100A1P23297 94 aa5.2□□□□□ -1.58
SPTLC1P4-201ENST00000435997 PSMB2P49721 201 aa5.2□□□□□ -1.58
SPTLC1P4-201ENST00000435997 HSD52Q0P140 79 aa5.2□□□□□ -1.58
SPTLC1P4-201ENST00000435997 KRTAP6-3Q3LI67 103 aa5.2□□□□□ -1.58
SPTLC1P4-201ENST00000435997 RBM3P98179 157 aaKnown RBP5.19□□□□□ -1.58
SPTLC1P4-201ENST00000435997 VPS25Q9BRG1 176 aa5.19□□□□□ -1.58
SPTLC1P4-201ENST00000435997 Q6ZQT0 140 aa5.18□□□□□ -1.58
SPTLC1P4-201ENST00000435997 DSCR8Q96T75 97 aa5.18□□□□□ -1.58
SPTLC1P4-201ENST00000435997 C21orf62-AS1Q17RA5 79 aa5.17□□□□□ -1.58
SPTLC1P4-201ENST00000435997 C8orf17Q9NRJ1 99 aa5.16□□□□□ -1.58
SPTLC1P4-201ENST00000435997 C9JAW5 83 aa5.14□□□□□ -1.59
SPTLC1P4-201ENST00000435997 NDUFB1O75438 58 aa5.14□□□□□ -1.59
SPTLC1P4-201ENST00000435997 IGKV3D-7A0A0C4DH55 119 aa5.13□□□□□ -1.59
SPTLC1P4-201ENST00000435997 PYY3Q5JQD4 70 aa5.13□□□□□ -1.59
SPTLC1P4-201ENST00000435997 A0A1B0GW54 56 aa5.11□□□□□ -1.59
SPTLC1P4-201ENST00000435997 Q6ZVQ6 151 aa5.11□□□□□ -1.59
SPTLC1P4-201ENST00000435997 LOC110117498A0A087WWA1 95 aa5.1□□□□□ -1.59
SPTLC1P4-201ENST00000435997 BAALC-AS2P0C853 105 aa5.1□□□□□ -1.59
SPTLC1P4-201ENST00000435997 H1FX-AS1Q4G0G2 97 aa5.1□□□□□ -1.59
SPTLC1P4-201ENST00000435997 PRR15Q8IV56 129 aa5.09□□□□□ -1.59
SPTLC1P4-201ENST00000435997 SCGB1C2P0DMR2 95 aa5.08□□□□□ -1.6
SPTLC1P4-201ENST00000435997 LYRM7Q5U5X0 104 aa5.08□□□□□ -1.6
SPTLC1P4-201ENST00000435997 UQCR10Q9UDW1 63 aa5.08□□□□□ -1.6
SPTLC1P4-201ENST00000435997 MMP24-AS1A0A0U1RRL7 71 aa5.07□□□□□ -1.6
SPTLC1P4-201ENST00000435997 TMEM254Q8TBM7 123 aa5.07□□□□□ -1.6
SPTLC1P4-201ENST00000435997 JMJD7-PLA2G4BH0Y9G9 81 aa5.06□□□□□ -1.6
SPTLC1P4-201ENST00000435997 MRPL34Q9BQ48 92 aaKnown RBP5.06□□□□□ -1.6
SPTLC1P4-201ENST00000435997 PDE6GP18545 87 aa5.04□□□□□ -1.6
SPTLC1P4-201ENST00000435997 C14orf132Q9NPU4 83 aa5.02□□□□□ -1.61
SPTLC1P4-201ENST00000435997 ATXN8Q156A1 80 aa5.01□□□□□ -1.61
SPTLC1P4-201ENST00000435997 hDV103S1A0JD37 113 aa5□□□□□ -1.61
SPTLC1P4-201ENST00000435997 K7EQZ3 153 aa5□□□□□ -1.61
SPTLC1P4-201ENST00000435997 MT1BP07438 61 aa5□□□□□ -1.61
SPTLC1P4-201ENST00000435997 Q5W150 140 aa4.99□□□□□ -1.61
SPTLC1P4-201ENST00000435997 C7orf65Q6ZTY9 151 aa4.99□□□□□ -1.61
SPTLC1P4-201ENST00000435997 NEBP20929 6669 aa4.98□□□□□ -1.61
SPTLC1P4-201ENST00000435997 IGKV2D-30A0A075B6S6 120 aa4.98□□□□□ -1.61
SPTLC1P4-201ENST00000435997 IGKV2-30P06310 120 aa4.98□□□□□ -1.61
SPTLC1P4-201ENST00000435997 NREPQ16612 68 aa4.98□□□□□ -1.61
SPTLC1P4-201ENST00000435997 A6NN06 94 aa4.96□□□□□ -1.62
SPTLC1P4-201ENST00000435997 NDUFS5O43920 106 aa4.96□□□□□ -1.62
SPTLC1P4-201ENST00000435997 KRTAP19-8Q3LI54 63 aa4.96□□□□□ -1.62
SPTLC1P4-201ENST00000435997 NAA38Q9BRA0 125 aaKnown RBP4.96□□□□□ -1.62
SPTLC1P4-201ENST00000435997 SPRR2GQ9BYE4 73 aa4.95□□□□□ -1.62
SPTLC1P4-201ENST00000435997 C4orf26Q17RF5 130 aa4.93□□□□□ -1.62
SPTLC1P4-201ENST00000435997 M0R143 59 aa4.92□□□□□ -1.62
SPTLC1P4-201ENST00000435997 KRTAP5-9P26371 169 aa4.92□□□□□ -1.62
SPTLC1P4-201ENST00000435997 Q5VV11 94 aa4.92□□□□□ -1.62
SPTLC1P4-201ENST00000435997 KRTAP10-5P60370 271 aa4.91□□□□□ -1.62
SPTLC1P4-201ENST00000435997 KRTAP3-1Q9BYR8 98 aa4.91□□□□□ -1.62
SPTLC1P4-201ENST00000435997 C5orf47Q569G3 176 aa4.9□□□□□ -1.63
SPTLC1P4-201ENST00000435997 MUC12Q9UKN1 5478 aa4.9□□□□□ -1.63
SPTLC1P4-201ENST00000435997 FAM236AA0A1B0GUQ0 79 aa4.89□□□□□ -1.63
SPTLC1P4-201ENST00000435997 FAM236BA0A1B0GV22 79 aa4.89□□□□□ -1.63
SPTLC1P4-201ENST00000435997 BPY2O14599 106 aa4.89□□□□□ -1.63
SPTLC1P4-201ENST00000435997 KRTAP20-1Q3LI63 56 aa4.89□□□□□ -1.63
SPTLC1P4-201ENST00000435997 HCG22E2RYF7 251 aa4.88□□□□□ -1.63
SPTLC1P4-201ENST00000435997 CASC2Q6XLA1 102 aa4.87□□□□□ -1.63
SPTLC1P4-201ENST00000435997 Q8N9L7 120 aa4.87□□□□□ -1.63
SPTLC1P4-201ENST00000435997 H3BT86 120 aa4.86□□□□□ -1.63
SPTLC1P4-201ENST00000435997 CXCL6P80162 114 aa4.86□□□□□ -1.63
SPTLC1P4-201ENST00000435997 S4R3F8 94 aa4.86□□□□□ -1.63
SPTLC1P4-201ENST00000435997 TMA7Q9Y2S6 64 aaKnown RBP4.85□□□□□ -1.63
SPTLC1P4-201ENST00000435997 CSAG1Q6PB30 78 aa4.84□□□□□ -1.63
SPTLC1P4-201ENST00000435997 LCA10Q71F78 164 aa4.84□□□□□ -1.63
SPTLC1P4-201ENST00000435997 KLKP1Q107X0 134 aa4.82□□□□□ -1.64
SPTLC1P4-201ENST00000435997 C1orf64Q8NEQ6 169 aa4.8□□□□□ -1.64
SPTLC1P4-201ENST00000435997 KMT2DO14686 5537 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms