RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 KRTAP26-1Q6PEX3 210 aa5.86□□□□□ -1.47
FN1-209ENST00000432072 DCHS1Q96JQ0 3298 aa5.85□□□□□ -1.47
FN1-209ENST00000432072 LINC00472Q9H8W2 130 aa5.85□□□□□ -1.47
FN1-209ENST00000432072 ADM2Q7Z4H4 148 aa5.84□□□□□ -1.47
FN1-209ENST00000432072 PANO1I0J062 215 aa5.84□□□□□ -1.47
FN1-209ENST00000432072 Q8NDZ9 215 aa5.83□□□□□ -1.48
FN1-209ENST00000432072 NF1P21359 2839 aa5.83□□□□□ -1.48
FN1-209ENST00000432072 DCHS2Q6V1P9 2916 aa5.82□□□□□ -1.48
FN1-209ENST00000432072 ZFHX4Q86UP3 3567 aa5.79□□□□□ -1.48
FN1-209ENST00000432072 H1FX-AS1Q4G0G2 97 aa5.78□□□□□ -1.48
FN1-209ENST00000432072 C20orf166-AS1Q96NR2 134 aa5.77□□□□□ -1.49
FN1-209ENST00000432072 RPS29P62273 56 aaKnown RBP5.77□□□□□ -1.49
FN1-209ENST00000432072 KTN1-AS1Q86SY8 53 aa5.77□□□□□ -1.49
FN1-209ENST00000432072 RELNP78509 3460 aa5.76□□□□□ -1.49
FN1-209ENST00000432072 DMDP11532 3685 aa5.76□□□□□ -1.49
FN1-209ENST00000432072 PKD1L1Q8TDX9 2849 aa5.74□□□□□ -1.49
FN1-209ENST00000432072 Q6ZRN7 208 aaPredicted RBP5.74□□□□□ -1.49
FN1-209ENST00000432072 SPENQ96T58 3664 aaKnown RBP5.74□□□□□ -1.49
FN1-209ENST00000432072 Q75L30 129 aa5.73□□□□□ -1.49
FN1-209ENST00000432072 RPL37P61927 97 aaKnown RBP5.71□□□□□ -1.5
FN1-209ENST00000432072 FBN2P35556 2912 aa5.7□□□□□ -1.5
FN1-209ENST00000432072 A8MUU9 505 aa5.69□□□□□ -1.5
FN1-209ENST00000432072 ZANQ9Y493 2812 aa5.67□□□□□ -1.5
FN1-209ENST00000432072 ASB16-AS1Q495Z4 193 aa5.66□□□□□ -1.5
FN1-209ENST00000432072 VWFP04275 2813 aa5.66□□□□□ -1.5
FN1-209ENST00000432072 KRTAP4-16G5E9R7 235 aaPredicted RBP5.66□□□□□ -1.5
FN1-209ENST00000432072 LINC01558Q9Y6Z2 57 aa5.63□□□□□ -1.51
FN1-209ENST00000432072 ROMO1P60602 79 aa5.63□□□□□ -1.51
FN1-209ENST00000432072 TENM3Q9P273 2699 aa5.62□□□□□ -1.51
FN1-209ENST00000432072 KRTAP11-1Q8IUC1 163 aa5.61□□□□□ -1.51
FN1-209ENST00000432072 SMG1Q96Q15 3661 aaKnown RBP5.6□□□□□ -1.51
FN1-209ENST00000432072 A0A0A0MQY5 61 aa5.6□□□□□ -1.51
FN1-209ENST00000432072 CSMD1Q96PZ7 3565 aa5.59□□□□□ -1.51
FN1-209ENST00000432072 MUC3AQ02505 3323 aa5.59□□□□□ -1.52
FN1-209ENST00000432072 KRTAP13-2Q52LG2 175 aa5.59□□□□□ -1.52
FN1-209ENST00000432072 SPATA8Q6RVD6 105 aa5.59□□□□□ -1.52
FN1-209ENST00000432072 HRNRQ86YZ3 2850 aaPredicted RBP5.56□□□□□ -1.52
FN1-209ENST00000432072 NOTCH2NLQ7Z3S9 236 aa5.55□□□□□ -1.52
FN1-209ENST00000432072 TENM2Q9NT68 2774 aa5.54□□□□□ -1.52
FN1-209ENST00000432072 Q5XG85 94 aa5.54□□□□□ -1.52
FN1-209ENST00000432072 A0A1B0GVY2 172 aa5.51□□□□□ -1.53
FN1-209ENST00000432072 PDZD2O15018 2839 aa5.5□□□□□ -1.53
FN1-209ENST00000432072 COL7A1Q02388 2944 aa5.48□□□□□ -1.53
FN1-209ENST00000432072 TNP1P09430 55 aa5.48□□□□□ -1.53
FN1-209ENST00000432072 KRTAP10-8P60410 259 aa5.47□□□□□ -1.53
FN1-209ENST00000432072 KRTAP13-1Q8IUC0 172 aa5.47□□□□□ -1.53
FN1-209ENST00000432072 KRTAP10-10P60014 251 aa5.47□□□□□ -1.53
FN1-209ENST00000432072 TGP01266 2768 aa5.46□□□□□ -1.54
FN1-209ENST00000432072 Q5VV11 94 aa5.46□□□□□ -1.54
FN1-209ENST00000432072 MXRA5Q9NR99 2828 aa5.45□□□□□ -1.54
FN1-209ENST00000432072 KRTAP29-1A8MX34 341 aaPredicted RBP5.45□□□□□ -1.54
FN1-209ENST00000432072 TPRXLQ17RH7 258 aa5.45□□□□□ -1.54
FN1-209ENST00000432072 KRTAP7-1Q8IUC3 87 aa5.44□□□□□ -1.54
FN1-209ENST00000432072 PRAC1Q96KF2 57 aa5.44□□□□□ -1.54
FN1-209ENST00000432072 PRO2289Q9P1D8 64 aa5.42□□□□□ -1.54
FN1-209ENST00000432072 XP32Q5T750 250 aa5.42□□□□□ -1.54
FN1-209ENST00000432072 CUBNO60494 3623 aa5.42□□□□□ -1.54
FN1-209ENST00000432072 H3BS24 57 aa5.41□□□□□ -1.54
FN1-209ENST00000432072 SVEP1Q4LDE5 3571 aa5.36□□□□□ -1.55
FN1-209ENST00000432072 BSNQ9UPA5 3926 aa5.36□□□□□ -1.55
FN1-209ENST00000432072 CSMD2Q7Z408 3487 aa5.36□□□□□ -1.55
FN1-209ENST00000432072 A8MU10 97 aa5.34□□□□□ -1.56
FN1-209ENST00000432072 CYSTM1Q9H1C7 97 aa5.33□□□□□ -1.56
FN1-209ENST00000432072 TRRAPQ9Y4A5 3859 aa5.31□□□□□ -1.56
FN1-209ENST00000432072 VPS13CQ709C8 3753 aa5.31□□□□□ -1.56
FN1-209ENST00000432072 KRTAP1-4P0C5Y4 121 aa5.3□□□□□ -1.56
FN1-209ENST00000432072 MEGF8Q7Z7M0 2845 aa5.27□□□□□ -1.57
FN1-209ENST00000432072 SRRM2Q9UQ35 2752 aaKnown RBP5.27□□□□□ -1.57
FN1-209ENST00000432072 FBN1P35555 2871 aaKnown RBP5.25□□□□□ -1.57
FN1-209ENST00000432072 KRTAP13-3Q3SY46 172 aa5.24□□□□□ -1.57
FN1-209ENST00000432072 C10orf95Q9H7T3 257 aa5.22□□□□□ -1.57
FN1-209ENST00000432072 KRTAP16-1A8MUX0 517 aa5.18□□□□□ -1.58
FN1-209ENST00000432072 PP632Q6XCG6 107 aa5.14□□□□□ -1.59
FN1-209ENST00000432072 KRTAP25-1Q3LHN0 102 aa5.13□□□□□ -1.59
FN1-209ENST00000432072 ZNF469Q96JG9 3925 aaPredicted RBP5.06□□□□□ -1.6
FN1-209ENST00000432072 CSMD3Q7Z407 3707 aa5.04□□□□□ -1.6
FN1-209ENST00000432072 AKAP9Q99996 3911 aa5.03□□□□□ -1.6
FN1-209ENST00000432072 NDUFAF8A1L188 74 aa5.02□□□□□ -1.61
FN1-209ENST00000432072 OTOGQ6ZRI0 2925 aa5.01□□□□□ -1.61
FN1-209ENST00000432072 P0C880 135 aa5□□□□□ -1.61
FN1-209ENST00000432072 FBN3Q75N90 2809 aa4.99□□□□□ -1.61
FN1-209ENST00000432072 A6NN06 94 aa4.93□□□□□ -1.62
FN1-209ENST00000432072 H0YAA0 97 aa4.91□□□□□ -1.62
FN1-209ENST00000432072 ANK3Q12955 4377 aaKnown RBP4.89□□□□□ -1.63
FN1-209ENST00000432072 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.65
FN1-209ENST00000432072 ALMS1Q8TCU4 4167 aa4.71□□□□□ -1.66
FN1-209ENST00000432072 KRTAP12-2P59991 146 aa4.71□□□□□ -1.66
FN1-209ENST00000432072 HUWE1Q7Z6Z7 4374 aaKnown RBP4.7□□□□□ -1.66
FN1-209ENST00000432072 KRTAP4-5Q9BYR2 181 aa4.69□□□□□ -1.66
FN1-209ENST00000432072 KRTAP15-1Q3LI76 137 aa4.69□□□□□ -1.66
FN1-209ENST00000432072 MT1HL1P0DM35 61 aa4.67□□□□□ -1.66
FN1-209ENST00000432072 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
FN1-209ENST00000432072 KRTAP12-1P59990 96 aa4.61□□□□□ -1.67
FN1-209ENST00000432072 LYSTQ99698 3801 aa4.61□□□□□ -1.67
FN1-209ENST00000432072 DNAH1Q9P2D7 4330 aa4.6□□□□□ -1.67
FN1-209ENST00000432072 KMT2AQ03164 3969 aa4.56□□□□□ -1.68
FN1-209ENST00000432072 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
FN1-209ENST00000432072 LORP23490 312 aaPredicted RBP4.52□□□□□ -1.69
FN1-209ENST00000432072 KRTAP3-1Q9BYR8 98 aa4.51□□□□□ -1.69
FN1-209ENST00000432072 CMYA5Q8N3K9 4069 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms