RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 HSD52Q0P140 79 aa7.67□□□□□ -1.18
SEC13-210ENST00000428626 TRACP01848 142 aa7.66□□□□□ -1.18
SEC13-210ENST00000428626 UQCR10Q9UDW1 63 aa7.66□□□□□ -1.18
SEC13-210ENST00000428626 H3BQ85 93 aa7.64□□□□□ -1.19
SEC13-210ENST00000428626 UBE2V1Q13404 147 aa7.64□□□□□ -1.19
SEC13-210ENST00000428626 RBM12B-AS1Q9P1G2 102 aa7.64□□□□□ -1.19
SEC13-210ENST00000428626 KRTAP19-1Q8IUB9 90 aa7.63□□□□□ -1.19
SEC13-210ENST00000428626 A0A1B0GVX0 72 aa7.62□□□□□ -1.19
SEC13-210ENST00000428626 KRTAP10-10P60014 251 aa7.62□□□□□ -1.19
SEC13-210ENST00000428626 COX6CP09669 75 aa7.61□□□□□ -1.19
SEC13-210ENST00000428626 VPS25Q9BRG1 176 aa7.61□□□□□ -1.19
SEC13-210ENST00000428626 PCP4L1A6NKN8 68 aa7.59□□□□□ -1.19
SEC13-210ENST00000428626 C8orf87E5RJ46 101 aa7.59□□□□□ -1.19
SEC13-210ENST00000428626 RBM3P98179 157 aaKnown RBP7.57□□□□□ -1.2
SEC13-210ENST00000428626 ZCCHC13Q8WW36 166 aaKnown RBP7.57□□□□□ -1.2
SEC13-210ENST00000428626 SPINK7P58062 85 aa7.55□□□□□ -1.2
SEC13-210ENST00000428626 DSCR8Q96T75 97 aa7.54□□□□□ -1.2
SEC13-210ENST00000428626 Q6ZQT0 140 aa7.53□□□□□ -1.2
SEC13-210ENST00000428626 M0R143 59 aa7.52□□□□□ -1.21
SEC13-210ENST00000428626 BAALC-AS2P0C853 105 aa7.52□□□□□ -1.21
SEC13-210ENST00000428626 SCGB1C2P0DMR2 95 aa7.52□□□□□ -1.21
SEC13-210ENST00000428626 Q8N9P0 234 aaPredicted RBP7.52□□□□□ -1.21
SEC13-210ENST00000428626 KRTAP3-3Q9BYR6 98 aa7.52□□□□□ -1.21
SEC13-210ENST00000428626 KRTAP3-2Q9BYR7 98 aa7.52□□□□□ -1.21
SEC13-210ENST00000428626 C9JAW5 83 aa7.5□□□□□ -1.21
SEC13-210ENST00000428626 J3KT08 172 aa7.5□□□□□ -1.21
SEC13-210ENST00000428626 MACF1Q9UPN3 7388 aaKnown RBP7.48□□□□□ -1.21
SEC13-210ENST00000428626 MTURNQ8N3F0 131 aa7.48□□□□□ -1.21
SEC13-210ENST00000428626 C8orf17Q9NRJ1 99 aa7.47□□□□□ -1.21
SEC13-210ENST00000428626 IGKV3D-7A0A0C4DH55 119 aa7.45□□□□□ -1.22
SEC13-210ENST00000428626 WFDC13Q8IUB5 93 aa7.45□□□□□ -1.22
SEC13-210ENST00000428626 A8MWP4 228 aa7.44□□□□□ -1.22
SEC13-210ENST00000428626 NAA38Q9BRA0 125 aaKnown RBP7.44□□□□□ -1.22
SEC13-210ENST00000428626 SYNE2Q8WXH0 6885 aaKnown RBP7.44□□□□□ -1.22
SEC13-210ENST00000428626 NDUFB1O75438 58 aa7.43□□□□□ -1.22
SEC13-210ENST00000428626 C21orf62-AS1Q17RA5 79 aa7.43□□□□□ -1.22
SEC13-210ENST00000428626 KRTAP19-6Q3LI70 58 aa7.42□□□□□ -1.22
SEC13-210ENST00000428626 BATFQ16520 125 aa7.41□□□□□ -1.22
SEC13-210ENST00000428626 LOC110117498A0A087WWA1 95 aa7.4□□□□□ -1.22
SEC13-210ENST00000428626 COL5A1-AS1Q5SY13 56 aa7.4□□□□□ -1.22
SEC13-210ENST00000428626 Q6ZVQ6 151 aa7.39□□□□□ -1.23
SEC13-210ENST00000428626 C14orf132Q9NPU4 83 aa7.38□□□□□ -1.23
SEC13-210ENST00000428626 JMJD7-PLA2G4BH0Y9G9 81 aa7.37□□□□□ -1.23
SEC13-210ENST00000428626 ATXN8Q156A1 80 aa7.37□□□□□ -1.23
SEC13-210ENST00000428626 LYRM7Q5U5X0 104 aa7.37□□□□□ -1.23
SEC13-210ENST00000428626 PRR15Q8IV56 129 aa7.37□□□□□ -1.23
SEC13-210ENST00000428626 MMP24-AS1A0A0U1RRL7 71 aa7.35□□□□□ -1.23
SEC13-210ENST00000428626 A0A1B0GW54 56 aa7.35□□□□□ -1.23
SEC13-210ENST00000428626 PDE6GP18545 87 aa7.32□□□□□ -1.24
SEC13-210ENST00000428626 TMEM254Q8TBM7 123 aa7.31□□□□□ -1.24
SEC13-210ENST00000428626 MRPL34Q9BQ48 92 aaKnown RBP7.31□□□□□ -1.24
SEC13-210ENST00000428626 TAX1BP3O14907 124 aa7.3□□□□□ -1.24
SEC13-210ENST00000428626 NREPQ16612 68 aa7.3□□□□□ -1.24
SEC13-210ENST00000428626 C9orf118A6NHY6 69 aa7.29□□□□□ -1.24
SEC13-210ENST00000428626 K7EQZ3 153 aa7.28□□□□□ -1.24
SEC13-210ENST00000428626 H1FX-AS1Q4G0G2 97 aa7.28□□□□□ -1.24
SEC13-210ENST00000428626 LINC00846Q9NV44 126 aa7.27□□□□□ -1.25
SEC13-210ENST00000428626 hDV103S1A0JD37 113 aa7.25□□□□□ -1.25
SEC13-210ENST00000428626 Q5W150 140 aa7.25□□□□□ -1.25
SEC13-210ENST00000428626 A0A1W2PPM0 123 aa7.23□□□□□ -1.25
SEC13-210ENST00000428626 NDUFS5O43920 106 aa7.22□□□□□ -1.25
SEC13-210ENST00000428626 IGKV2D-30A0A075B6S6 120 aa7.21□□□□□ -1.26
SEC13-210ENST00000428626 IGKV2-30P06310 120 aa7.21□□□□□ -1.26
SEC13-210ENST00000428626 A0A1B0GV90 55 aa7.2□□□□□ -1.26
SEC13-210ENST00000428626 GTF2H5Q6ZYL4 71 aa7.19□□□□□ -1.26
SEC13-210ENST00000428626 KRTAP6-3Q3LI67 103 aa7.17□□□□□ -1.26
SEC13-210ENST00000428626 Q8N9L7 120 aa7.17□□□□□ -1.26
SEC13-210ENST00000428626 SPCS1Q9Y6A9 102 aa7.17□□□□□ -1.26
SEC13-210ENST00000428626 K7EP34 96 aa7.16□□□□□ -1.26
SEC13-210ENST00000428626 C7orf65Q6ZTY9 151 aa7.16□□□□□ -1.26
SEC13-210ENST00000428626 BPY2O14599 106 aa7.15□□□□□ -1.26
SEC13-210ENST00000428626 H3BT86 120 aa7.14□□□□□ -1.27
SEC13-210ENST00000428626 C4orf26Q17RF5 130 aa7.14□□□□□ -1.27
SEC13-210ENST00000428626 HCG22E2RYF7 251 aa7.11□□□□□ -1.27
SEC13-210ENST00000428626 CASC2Q6XLA1 102 aa7.1□□□□□ -1.27
SEC13-210ENST00000428626 KRTAP3-1Q9BYR8 98 aa7.09□□□□□ -1.27
SEC13-210ENST00000428626 F8W1H4 67 aa7.07□□□□□ -1.28
SEC13-210ENST00000428626 MT1BP07438 61 aa7.06□□□□□ -1.28
SEC13-210ENST00000428626 C5orf47Q569G3 176 aa7.06□□□□□ -1.28
SEC13-210ENST00000428626 SMCPP49901 116 aaPredicted RBP7.04□□□□□ -1.28
SEC13-210ENST00000428626 CXCL6P80162 114 aa7.02□□□□□ -1.29
SEC13-210ENST00000428626 PRO0461Q9UI25 63 aa7.02□□□□□ -1.29
SEC13-210ENST00000428626 NEBP20929 6669 aa7□□□□□ -1.29
SEC13-210ENST00000428626 FAM236AA0A1B0GUQ0 79 aa6.98□□□□□ -1.29
SEC13-210ENST00000428626 FAM236BA0A1B0GV22 79 aa6.98□□□□□ -1.29
SEC13-210ENST00000428626 KRTAP19-8Q3LI54 63 aa6.98□□□□□ -1.29
SEC13-210ENST00000428626 LCA10Q71F78 164 aa6.97□□□□□ -1.29
SEC13-210ENST00000428626 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
SEC13-210ENST00000428626 S4R3F8 94 aa6.97□□□□□ -1.29
SEC13-210ENST00000428626 A6NN06 94 aa6.96□□□□□ -1.3
SEC13-210ENST00000428626 C1orf64Q8NEQ6 169 aa6.95□□□□□ -1.3
SEC13-210ENST00000428626 Q5VV11 94 aa6.94□□□□□ -1.3
SEC13-210ENST00000428626 ETDBQ3ZM63 59 aa6.93□□□□□ -1.3
SEC13-210ENST00000428626 MUC12Q9UKN1 5478 aa6.93□□□□□ -1.3
SEC13-210ENST00000428626 CSAG1Q6PB30 78 aa6.92□□□□□ -1.3
SEC13-210ENST00000428626 UBL5Q9BZL1 73 aa6.91□□□□□ -1.3
SEC13-210ENST00000428626 KRTAP10-5P60370 271 aa6.89□□□□□ -1.31
SEC13-210ENST00000428626 J3QR89 54 aa6.88□□□□□ -1.31
SEC13-210ENST00000428626 KLKP1Q107X0 134 aa6.86□□□□□ -1.31
SEC13-210ENST00000428626 K7ERU9 68 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms