RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 FAM236DA0A1B0GTK5 79 aa9.28□□□□□ -0.92
PSPC1-202ENST00000427943 C9JAW5 83 aa9.28□□□□□ -0.92
PSPC1-202ENST00000427943 FAM236CP0DP71 79 aa9.28□□□□□ -0.92
PSPC1-202ENST00000427943 C8orf87E5RJ46 101 aa9.27□□□□□ -0.93
PSPC1-202ENST00000427943 HRES1P13985 223 aa9.26□□□□□ -0.93
PSPC1-202ENST00000427943 M0R143 59 aa9.25□□□□□ -0.93
PSPC1-202ENST00000427943 KRTAP9-8Q9BYQ0 159 aa9.24□□□□□ -0.93
PSPC1-202ENST00000427943 ATXN8Q156A1 80 aa9.23□□□□□ -0.93
PSPC1-202ENST00000427943 Q6ZQT0 140 aa9.23□□□□□ -0.93
PSPC1-202ENST00000427943 J3KT08 172 aa9.22□□□□□ -0.93
PSPC1-202ENST00000427943 MPLKIPQ8TAP9 179 aa9.22□□□□□ -0.93
PSPC1-202ENST00000427943 RBM12B-AS1Q9P1G2 102 aa9.22□□□□□ -0.93
PSPC1-202ENST00000427943 C21orf62-AS1Q17RA5 79 aa9.21□□□□□ -0.94
PSPC1-202ENST00000427943 JMJD7-PLA2G4BH0Y9G9 81 aa9.18□□□□□ -0.94
PSPC1-202ENST00000427943 ZCCHC13Q8WW36 166 aaKnown RBP9.17□□□□□ -0.94
PSPC1-202ENST00000427943 LOC110117498A0A087WWA1 95 aa9.16□□□□□ -0.94
PSPC1-202ENST00000427943 NDUFB1O75438 58 aa9.15□□□□□ -0.94
PSPC1-202ENST00000427943 C14orf132Q9NPU4 83 aa9.15□□□□□ -0.94
PSPC1-202ENST00000427943 A8MWP4 228 aa9.12□□□□□ -0.95
PSPC1-202ENST00000427943 MT2AP02795 61 aa9.12□□□□□ -0.95
PSPC1-202ENST00000427943 C8orf17Q9NRJ1 99 aa9.12□□□□□ -0.95
PSPC1-202ENST00000427943 Q8N9P0 234 aaPredicted RBP9.11□□□□□ -0.95
PSPC1-202ENST00000427943 IGKV3D-7A0A0C4DH55 119 aa9.1□□□□□ -0.95
PSPC1-202ENST00000427943 SPINK7P58062 85 aa9.1□□□□□ -0.95
PSPC1-202ENST00000427943 BATFQ16520 125 aa9.1□□□□□ -0.95
PSPC1-202ENST00000427943 A0A1B0GW54 56 aa9.09□□□□□ -0.95
PSPC1-202ENST00000427943 PDE6GP18545 87 aa9.09□□□□□ -0.95
PSPC1-202ENST00000427943 LYRM7Q5U5X0 104 aa9.09□□□□□ -0.95
PSPC1-202ENST00000427943 MT1FP04733 61 aa9.06□□□□□ -0.96
PSPC1-202ENST00000427943 MTURNQ8N3F0 131 aa9.06□□□□□ -0.96
PSPC1-202ENST00000427943 A0A1B0GV90 55 aa9.04□□□□□ -0.96
PSPC1-202ENST00000427943 NREPQ16612 68 aa9.04□□□□□ -0.96
PSPC1-202ENST00000427943 Q6ZVQ6 151 aa9.04□□□□□ -0.96
PSPC1-202ENST00000427943 PRR15Q8IV56 129 aa9.02□□□□□ -0.97
PSPC1-202ENST00000427943 USH2AO75445 5202 aa9.01□□□□□ -0.97
PSPC1-202ENST00000427943 WFDC13Q8IUB5 93 aa9.01□□□□□ -0.97
PSPC1-202ENST00000427943 KRTAP10-10P60014 251 aa9□□□□□ -0.97
PSPC1-202ENST00000427943 MMP24-AS1A0A0U1RRL7 71 aa8.99□□□□□ -0.97
PSPC1-202ENST00000427943 C9orf118A6NHY6 69 aa8.97□□□□□ -0.97
PSPC1-202ENST00000427943 H3BT86 120 aa8.96□□□□□ -0.98
PSPC1-202ENST00000427943 K7EQZ3 153 aa8.96□□□□□ -0.98
PSPC1-202ENST00000427943 MRPL34Q9BQ48 92 aaKnown RBP8.96□□□□□ -0.98
PSPC1-202ENST00000427943 A0A1W2PPM0 123 aa8.95□□□□□ -0.98
PSPC1-202ENST00000427943 LCE2BO14633 110 aa8.95□□□□□ -0.98
PSPC1-202ENST00000427943 TAX1BP3O14907 124 aa8.95□□□□□ -0.98
PSPC1-202ENST00000427943 TMEM254Q8TBM7 123 aa8.95□□□□□ -0.98
PSPC1-202ENST00000427943 COL5A1-AS1Q5SY13 56 aa8.94□□□□□ -0.98
PSPC1-202ENST00000427943 KRTAP9-3Q9BYQ3 159 aa8.94□□□□□ -0.98
PSPC1-202ENST00000427943 SSPOA2VEC9 5147 aa8.93□□□□□ -0.98
PSPC1-202ENST00000427943 hDV103S1A0JD37 113 aa8.91□□□□□ -0.98
PSPC1-202ENST00000427943 NDUFS5O43920 106 aa8.91□□□□□ -0.98
PSPC1-202ENST00000427943 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.87□□□□□ -0.99
PSPC1-202ENST00000427943 BPY2O14599 106 aa8.87□□□□□ -0.99
PSPC1-202ENST00000427943 KRTAP19-1Q8IUB9 90 aa8.83□□□□□ -1
PSPC1-202ENST00000427943 Q8N9L7 120 aa8.83□□□□□ -1
PSPC1-202ENST00000427943 SPCS1Q9Y6A9 102 aa8.82□□□□□ -1
PSPC1-202ENST00000427943 IGKV2D-30A0A075B6S6 120 aa8.8□□□□□ -1
PSPC1-202ENST00000427943 IGKV2-30P06310 120 aa8.8□□□□□ -1
PSPC1-202ENST00000427943 FCGBPQ9Y6R7 5405 aaPredicted RBP8.79□□□□□ -1
PSPC1-202ENST00000427943 KRTAP9-7A8MTY7 169 aa8.78□□□□□ -1
PSPC1-202ENST00000427943 SMCPP49901 116 aaPredicted RBP8.78□□□□□ -1
PSPC1-202ENST00000427943 Q5W150 140 aa8.78□□□□□ -1
PSPC1-202ENST00000427943 H1FX-AS1Q4G0G2 97 aa8.77□□□□□ -1.01
PSPC1-202ENST00000427943 CASC2Q6XLA1 102 aa8.77□□□□□ -1.01
PSPC1-202ENST00000427943 C7orf65Q6ZTY9 151 aa8.76□□□□□ -1.01
PSPC1-202ENST00000427943 HCG22E2RYF7 251 aa8.74□□□□□ -1.01
PSPC1-202ENST00000427943 LINC00846Q9NV44 126 aa8.69□□□□□ -1.02
PSPC1-202ENST00000427943 PRO0461Q9UI25 63 aa8.68□□□□□ -1.02
PSPC1-202ENST00000427943 UBL5Q9BZL1 73 aa8.67□□□□□ -1.02
PSPC1-202ENST00000427943 C4orf26Q17RF5 130 aa8.66□□□□□ -1.02
PSPC1-202ENST00000427943 K7EP34 96 aa8.65□□□□□ -1.02
PSPC1-202ENST00000427943 CXCL6P80162 114 aa8.64□□□□□ -1.03
PSPC1-202ENST00000427943 GTF2H5Q6ZYL4 71 aa8.62□□□□□ -1.03
PSPC1-202ENST00000427943 KRTAP19-6Q3LI70 58 aa8.61□□□□□ -1.03
PSPC1-202ENST00000427943 MACF1Q9UPN3 7388 aaKnown RBP8.53□□□□□ -1.04
PSPC1-202ENST00000427943 C5orf47Q569G3 176 aa8.53□□□□□ -1.04
PSPC1-202ENST00000427943 K7ERU9 68 aa8.52□□□□□ -1.05
PSPC1-202ENST00000427943 KRTAP3-1Q9BYR8 98 aa8.5□□□□□ -1.05
PSPC1-202ENST00000427943 ETDBQ3ZM63 59 aa8.47□□□□□ -1.05
PSPC1-202ENST00000427943 S4R3F8 94 aa8.47□□□□□ -1.05
PSPC1-202ENST00000427943 C1orf64Q8NEQ6 169 aa8.46□□□□□ -1.06
PSPC1-202ENST00000427943 F8W1H4 67 aa8.45□□□□□ -1.06
PSPC1-202ENST00000427943 TP53AIP1Q9HCN2 124 aa8.45□□□□□ -1.06
PSPC1-202ENST00000427943 FAM236AA0A1B0GUQ0 79 aa8.44□□□□□ -1.06
PSPC1-202ENST00000427943 FAM236BA0A1B0GV22 79 aa8.44□□□□□ -1.06
PSPC1-202ENST00000427943 SYNE2Q8WXH0 6885 aaKnown RBP8.44□□□□□ -1.06
PSPC1-202ENST00000427943 LCA10Q71F78 164 aa8.42□□□□□ -1.06
PSPC1-202ENST00000427943 J3QR89 54 aa8.38□□□□□ -1.07
PSPC1-202ENST00000427943 PCP4P48539 62 aa8.38□□□□□ -1.07
PSPC1-202ENST00000427943 CSAG1Q6PB30 78 aa8.38□□□□□ -1.07
PSPC1-202ENST00000427943 CYP4F30PQ9H0H9 118 aa8.31□□□□□ -1.08
PSPC1-202ENST00000427943 TRAV22A0A0B4J277 110 aa8.3□□□□□ -1.08
PSPC1-202ENST00000427943 MT1BP07438 61 aa8.28□□□□□ -1.08
PSPC1-202ENST00000427943 SCGB1A1P11684 91 aa8.27□□□□□ -1.09
PSPC1-202ENST00000427943 KRTAP3-3Q9BYR6 98 aa8.27□□□□□ -1.09
PSPC1-202ENST00000427943 A0A087WVE0 104 aa8.26□□□□□ -1.09
PSPC1-202ENST00000427943 Q5VV11 94 aa8.26□□□□□ -1.09
PSPC1-202ENST00000427943 SPRR2GQ9BYE4 73 aa8.26□□□□□ -1.09
PSPC1-202ENST00000427943 LOC101927531A0A1B0GV80 90 aa8.25□□□□□ -1.09
PSPC1-202ENST00000427943 ACYP1P07311 99 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms