RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 FP248Q71RG6 208 aaPredicted RBP8.84□□□□□ -0.99
CLK3P2-201ENST00000427566 CD164Q04900 197 aa8.82□□□□□ -1
CLK3P2-201ENST00000427566 RNF213Q63HN8 5207 aa8.79□□□□□ -1
CLK3P2-201ENST00000427566 IGKV4-1P06312 121 aa8.79□□□□□ -1
CLK3P2-201ENST00000427566 A0A087WSZ3 146 aa8.78□□□□□ -1
CLK3P2-201ENST00000427566 UQCRQO14949 82 aa8.78□□□□□ -1
CLK3P2-201ENST00000427566 COX7CP15954 63 aa8.78□□□□□ -1
CLK3P2-201ENST00000427566 LIMD2Q9BT23 127 aa8.78□□□□□ -1
CLK3P2-201ENST00000427566 CCDC179H3BU77 68 aa8.77□□□□□ -1
CLK3P2-201ENST00000427566 SERP2Q8N6R1 65 aa8.77□□□□□ -1
CLK3P2-201ENST00000427566 SMIM20Q8N5G0 67 aa8.77□□□□□ -1.01
CLK3P2-201ENST00000427566 KRTAP13-3Q3SY46 172 aa8.75□□□□□ -1.01
CLK3P2-201ENST00000427566 DSCR10P59022 87 aa8.73□□□□□ -1.01
CLK3P2-201ENST00000427566 Q5XG85 94 aa8.73□□□□□ -1.01
CLK3P2-201ENST00000427566 Q8N9L7 120 aa8.73□□□□□ -1.01
CLK3P2-201ENST00000427566 TRAV7A0A075B6U4 112 aa8.71□□□□□ -1.01
CLK3P2-201ENST00000427566 C1orf195Q5TG92 126 aa8.71□□□□□ -1.01
CLK3P2-201ENST00000427566 SS18L2Q9UHA2 77 aa8.69□□□□□ -1.02
CLK3P2-201ENST00000427566 LINC00472Q9H8W2 130 aa8.68□□□□□ -1.02
CLK3P2-201ENST00000427566 J3KT08 172 aa8.67□□□□□ -1.02
CLK3P2-201ENST00000427566 K7EQZ3 153 aa8.67□□□□□ -1.02
CLK3P2-201ENST00000427566 C9orf92A6NGG3 77 aa8.64□□□□□ -1.03
CLK3P2-201ENST00000427566 A0A0U1RQV1 116 aa8.63□□□□□ -1.03
CLK3P2-201ENST00000427566 DEFB116Q30KQ4 102 aa8.63□□□□□ -1.03
CLK3P2-201ENST00000427566 ASB16-AS1Q495Z4 193 aa8.63□□□□□ -1.03
CLK3P2-201ENST00000427566 A8MWP4 228 aa8.62□□□□□ -1.03
CLK3P2-201ENST00000427566 HCG22E2RYF7 251 aa8.61□□□□□ -1.03
CLK3P2-201ENST00000427566 XP32Q5T750 250 aa8.61□□□□□ -1.03
CLK3P2-201ENST00000427566 SEC61BP60468 96 aaKnown RBP8.6□□□□□ -1.03
CLK3P2-201ENST00000427566 PRR15Q8IV56 129 aa8.6□□□□□ -1.03
CLK3P2-201ENST00000427566 OCR1Q9BZK8 76 aa8.6□□□□□ -1.03
CLK3P2-201ENST00000427566 Q96NJ1 140 aa8.59□□□□□ -1.03
CLK3P2-201ENST00000427566 MUC17Q685J3 4493 aa8.58□□□□□ -1.04
CLK3P2-201ENST00000427566 NDUFB1O75438 58 aa8.57□□□□□ -1.04
CLK3P2-201ENST00000427566 C20orf197Q8N268 126 aa8.56□□□□□ -1.04
CLK3P2-201ENST00000427566 MUC2Q02817 5179 aa8.55□□□□□ -1.04
CLK3P2-201ENST00000427566 KLKP1Q107X0 134 aa8.54□□□□□ -1.04
CLK3P2-201ENST00000427566 CASC2Q6XLA1 102 aa8.51□□□□□ -1.05
CLK3P2-201ENST00000427566 WFDC13Q8IUB5 93 aa8.51□□□□□ -1.05
CLK3P2-201ENST00000427566 TMEM258P61165 79 aa8.5□□□□□ -1.05
CLK3P2-201ENST00000427566 CYSTM1Q9H1C7 97 aa8.5□□□□□ -1.05
CLK3P2-201ENST00000427566 MMP24-AS1A0A0U1RRL7 71 aa8.49□□□□□ -1.05
CLK3P2-201ENST00000427566 TMEM254Q8TBM7 123 aa8.49□□□□□ -1.05
CLK3P2-201ENST00000427566 KRTAP4-1Q9BYQ7 146 aa8.49□□□□□ -1.05
CLK3P2-201ENST00000427566 A0A1B0GVX0 72 aa8.48□□□□□ -1.05
CLK3P2-201ENST00000427566 NDUFC1O43677 76 aa8.48□□□□□ -1.05
CLK3P2-201ENST00000427566 PCOTHQ58A44 107 aa8.48□□□□□ -1.05
CLK3P2-201ENST00000427566 C5orf47Q569G3 176 aa8.45□□□□□ -1.06
CLK3P2-201ENST00000427566 C8orf17Q9NRJ1 99 aa8.45□□□□□ -1.06
CLK3P2-201ENST00000427566 hDV103S1A0JD37 113 aa8.45□□□□□ -1.06
CLK3P2-201ENST00000427566 SNURFQ9Y675 71 aa8.45□□□□□ -1.06
CLK3P2-201ENST00000427566 H7BZZ5 65 aa8.43□□□□□ -1.06
CLK3P2-201ENST00000427566 IGHV6-1A0A0B4J1U7 121 aa8.41□□□□□ -1.06
CLK3P2-201ENST00000427566 RPL37P61927 97 aaKnown RBP8.39□□□□□ -1.07
CLK3P2-201ENST00000427566 C8orf87E5RJ46 101 aa8.38□□□□□ -1.07
CLK3P2-201ENST00000427566 TP53AIP1Q9HCN2 124 aa8.38□□□□□ -1.07
CLK3P2-201ENST00000427566 H3BPC8 53 aa8.38□□□□□ -1.07
CLK3P2-201ENST00000427566 MP68P56378 58 aa8.38□□□□□ -1.07
CLK3P2-201ENST00000427566 NOTCH2NLQ7Z3S9 236 aa8.38□□□□□ -1.07
CLK3P2-201ENST00000427566 ZCCHC13Q8WW36 166 aaKnown RBP8.37□□□□□ -1.07
CLK3P2-201ENST00000427566 MRPL34Q9BQ48 92 aaKnown RBP8.37□□□□□ -1.07
CLK3P2-201ENST00000427566 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
CLK3P2-201ENST00000427566 FAM236DA0A1B0GTK5 79 aa8.35□□□□□ -1.07
CLK3P2-201ENST00000427566 FAM236CP0DP71 79 aa8.35□□□□□ -1.07
CLK3P2-201ENST00000427566 FAT4Q6V0I7 4981 aa8.35□□□□□ -1.07
CLK3P2-201ENST00000427566 ATP5EP56381 51 aaPredicted RBP8.34□□□□□ -1.07
CLK3P2-201ENST00000427566 H0Y9P7 68 aa8.32□□□□□ -1.08
CLK3P2-201ENST00000427566 LINC00313P59037 77 aa8.32□□□□□ -1.08
CLK3P2-201ENST00000427566 RPS28P62857 69 aaKnown RBP8.32□□□□□ -1.08
CLK3P2-201ENST00000427566 Q75L30 129 aa8.32□□□□□ -1.08
CLK3P2-201ENST00000427566 TRAV22A0A0B4J277 110 aa8.31□□□□□ -1.08
CLK3P2-201ENST00000427566 KRTAP16-1A8MUX0 517 aa8.31□□□□□ -1.08
CLK3P2-201ENST00000427566 C20orf166-AS1Q96NR2 134 aa8.31□□□□□ -1.08
CLK3P2-201ENST00000427566 A8MUU9 505 aa8.29□□□□□ -1.08
CLK3P2-201ENST00000427566 ATP11AUNQ6ZP68 121 aa8.29□□□□□ -1.08
CLK3P2-201ENST00000427566 LINC00208Q96KT6 92 aa8.28□□□□□ -1.08
CLK3P2-201ENST00000427566 NDUFS5O43920 106 aa8.27□□□□□ -1.09
CLK3P2-201ENST00000427566 C1orf64Q8NEQ6 169 aa8.24□□□□□ -1.09
CLK3P2-201ENST00000427566 SERP1Q9Y6X1 66 aa8.23□□□□□ -1.09
CLK3P2-201ENST00000427566 Q8N9P0 234 aaPredicted RBP8.22□□□□□ -1.09
CLK3P2-201ENST00000427566 LCE2CQ5TA81 110 aa8.2□□□□□ -1.1
CLK3P2-201ENST00000427566 KRTAP19-2Q3LHN2 52 aa8.19□□□□□ -1.1
CLK3P2-201ENST00000427566 COX6B2Q6YFQ2 88 aa8.19□□□□□ -1.1
CLK3P2-201ENST00000427566 SPANXA2-OT1Q8N9U9 137 aa8.18□□□□□ -1.1
CLK3P2-201ENST00000427566 CYP4F30PQ9H0H9 118 aa8.16□□□□□ -1.1
CLK3P2-201ENST00000427566 LOC101927531A0A1B0GV80 90 aa8.15□□□□□ -1.1
CLK3P2-201ENST00000427566 MT1HP80294 61 aa8.13□□□□□ -1.11
CLK3P2-201ENST00000427566 Q5W150 140 aa8.13□□□□□ -1.11
CLK3P2-201ENST00000427566 LCE2DQ5TA82 110 aaPredicted RBP8.11□□□□□ -1.11
CLK3P2-201ENST00000427566 KRTAP9-2Q9BYQ4 174 aa8.1□□□□□ -1.11
CLK3P2-201ENST00000427566 M0R2T5 61 aa8.08□□□□□ -1.12
CLK3P2-201ENST00000427566 SMIM26A0A096LP01 95 aa8.05□□□□□ -1.12
CLK3P2-201ENST00000427566 IGKV2-30P06310 120 aa8.02□□□□□ -1.13
CLK3P2-201ENST00000427566 HRES1P13985 223 aa7.97□□□□□ -1.13
CLK3P2-201ENST00000427566 KRTAP10-6P60371 365 aaPredicted RBP7.95□□□□□ -1.14
CLK3P2-201ENST00000427566 SPINK7P58062 85 aa7.94□□□□□ -1.14
CLK3P2-201ENST00000427566 FLGP20930 4061 aaPredicted RBP7.94□□□□□ -1.14
CLK3P2-201ENST00000427566 MPLKIPQ8TAP9 179 aa7.93□□□□□ -1.14
CLK3P2-201ENST00000427566 LORP23490 312 aaPredicted RBP7.92□□□□□ -1.14
CLK3P2-201ENST00000427566 RBM12B-AS1Q9P1G2 102 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms