RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 VPS25Q9BRG1 176 aa7.94□□□□□ -1.14
HLA-DQB2-230ENST00000427449 C8orf87E5RJ46 101 aa7.93□□□□□ -1.14
HLA-DQB2-230ENST00000427449 DSCR8Q96T75 97 aa7.93□□□□□ -1.14
HLA-DQB2-230ENST00000427449 LOC110117498A0A087WWA1 95 aa7.92□□□□□ -1.14
HLA-DQB2-230ENST00000427449 SMIM6P0DI80 62 aa7.92□□□□□ -1.14
HLA-DQB2-230ENST00000427449 Q8N9P0 234 aaPredicted RBP7.91□□□□□ -1.14
HLA-DQB2-230ENST00000427449 C9JAW5 83 aa7.9□□□□□ -1.14
HLA-DQB2-230ENST00000427449 M0R143 59 aa7.9□□□□□ -1.14
HLA-DQB2-230ENST00000427449 MT1FP04733 61 aa7.9□□□□□ -1.14
HLA-DQB2-230ENST00000427449 TRBV20-1A0A075B6N2 111 aa7.89□□□□□ -1.15
HLA-DQB2-230ENST00000427449 SSPOA2VEC9 5147 aa7.89□□□□□ -1.15
HLA-DQB2-230ENST00000427449 ATXN8Q156A1 80 aa7.88□□□□□ -1.15
HLA-DQB2-230ENST00000427449 ZCCHC13Q8WW36 166 aaKnown RBP7.88□□□□□ -1.15
HLA-DQB2-230ENST00000427449 IGKV3D-7A0A0C4DH55 119 aa7.86□□□□□ -1.15
HLA-DQB2-230ENST00000427449 J3KT08 172 aa7.86□□□□□ -1.15
HLA-DQB2-230ENST00000427449 C14orf132Q9NPU4 83 aa7.85□□□□□ -1.15
HLA-DQB2-230ENST00000427449 A8MWP4 228 aa7.84□□□□□ -1.15
HLA-DQB2-230ENST00000427449 JMJD7-PLA2G4BH0Y9G9 81 aa7.84□□□□□ -1.15
HLA-DQB2-230ENST00000427449 LCE2BO14633 110 aa7.84□□□□□ -1.15
HLA-DQB2-230ENST00000427449 KRTAP9-3Q9BYQ3 159 aa7.84□□□□□ -1.15
HLA-DQB2-230ENST00000427449 C8orf17Q9NRJ1 99 aa7.84□□□□□ -1.15
HLA-DQB2-230ENST00000427449 A0A1B0GW54 56 aa7.83□□□□□ -1.16
HLA-DQB2-230ENST00000427449 C21orf62-AS1Q17RA5 79 aa7.83□□□□□ -1.16
HLA-DQB2-230ENST00000427449 SPINK7P58062 85 aa7.8□□□□□ -1.16
HLA-DQB2-230ENST00000427449 MMP24-AS1A0A0U1RRL7 71 aa7.79□□□□□ -1.16
HLA-DQB2-230ENST00000427449 RBM12B-AS1Q9P1G2 102 aa7.79□□□□□ -1.16
HLA-DQB2-230ENST00000427449 FAM236DA0A1B0GTK5 79 aa7.78□□□□□ -1.16
HLA-DQB2-230ENST00000427449 TAX1BP3O14907 124 aa7.78□□□□□ -1.16
HLA-DQB2-230ENST00000427449 FAM236CP0DP71 79 aa7.78□□□□□ -1.16
HLA-DQB2-230ENST00000427449 PDE6GP18545 87 aa7.77□□□□□ -1.17
HLA-DQB2-230ENST00000427449 PRR15Q8IV56 129 aa7.77□□□□□ -1.17
HLA-DQB2-230ENST00000427449 Q6ZVQ6 151 aa7.74□□□□□ -1.17
HLA-DQB2-230ENST00000427449 MTURNQ8N3F0 131 aa7.74□□□□□ -1.17
HLA-DQB2-230ENST00000427449 C9orf118A6NHY6 69 aa7.73□□□□□ -1.17
HLA-DQB2-230ENST00000427449 TSTD3H0UI37 97 aa7.73□□□□□ -1.17
HLA-DQB2-230ENST00000427449 H3BT86 120 aa7.72□□□□□ -1.17
HLA-DQB2-230ENST00000427449 K7EQZ3 153 aa7.72□□□□□ -1.17
HLA-DQB2-230ENST00000427449 NDUFB1O75438 58 aa7.72□□□□□ -1.17
HLA-DQB2-230ENST00000427449 BATFQ16520 125 aa7.72□□□□□ -1.17
HLA-DQB2-230ENST00000427449 FCGBPQ9Y6R7 5405 aaPredicted RBP7.72□□□□□ -1.17
HLA-DQB2-230ENST00000427449 A0A1W2PPM0 123 aa7.71□□□□□ -1.18
HLA-DQB2-230ENST00000427449 LYRM7Q5U5X0 104 aa7.71□□□□□ -1.18
HLA-DQB2-230ENST00000427449 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.7□□□□□ -1.18
HLA-DQB2-230ENST00000427449 WFDC13Q8IUB5 93 aa7.7□□□□□ -1.18
HLA-DQB2-230ENST00000427449 TMEM254Q8TBM7 123 aa7.69□□□□□ -1.18
HLA-DQB2-230ENST00000427449 SMCPP49901 116 aaPredicted RBP7.68□□□□□ -1.18
HLA-DQB2-230ENST00000427449 KRTAP10-10P60014 251 aa7.67□□□□□ -1.18
HLA-DQB2-230ENST00000427449 NREPQ16612 68 aa7.67□□□□□ -1.18
HLA-DQB2-230ENST00000427449 MRPL34Q9BQ48 92 aaKnown RBP7.67□□□□□ -1.18
HLA-DQB2-230ENST00000427449 KRTAP19-1Q8IUB9 90 aa7.66□□□□□ -1.18
HLA-DQB2-230ENST00000427449 Q5W150 140 aa7.63□□□□□ -1.19
HLA-DQB2-230ENST00000427449 hDV103S1A0JD37 113 aa7.61□□□□□ -1.19
HLA-DQB2-230ENST00000427449 PRO0461Q9UI25 63 aa7.61□□□□□ -1.19
HLA-DQB2-230ENST00000427449 Q8N9L7 120 aa7.59□□□□□ -1.19
HLA-DQB2-230ENST00000427449 KRTAP9-7A8MTY7 169 aa7.57□□□□□ -1.2
HLA-DQB2-230ENST00000427449 SPCS1Q9Y6A9 102 aa7.55□□□□□ -1.2
HLA-DQB2-230ENST00000427449 PCP4L1A6NKN8 68 aa7.54□□□□□ -1.2
HLA-DQB2-230ENST00000427449 BPY2O14599 106 aa7.54□□□□□ -1.2
HLA-DQB2-230ENST00000427449 KRTAP19-6Q3LI70 58 aa7.53□□□□□ -1.2
HLA-DQB2-230ENST00000427449 H1FX-AS1Q4G0G2 97 aa7.51□□□□□ -1.21
HLA-DQB2-230ENST00000427449 LINC00846Q9NV44 126 aa7.51□□□□□ -1.21
HLA-DQB2-230ENST00000427449 NDUFS5O43920 106 aa7.48□□□□□ -1.21
HLA-DQB2-230ENST00000427449 CASC2Q6XLA1 102 aa7.48□□□□□ -1.21
HLA-DQB2-230ENST00000427449 C7orf65Q6ZTY9 151 aa7.48□□□□□ -1.21
HLA-DQB2-230ENST00000427449 IGKV2D-30A0A075B6S6 120 aa7.47□□□□□ -1.21
HLA-DQB2-230ENST00000427449 IGKV2-30P06310 120 aa7.47□□□□□ -1.21
HLA-DQB2-230ENST00000427449 HCG22E2RYF7 251 aa7.46□□□□□ -1.22
HLA-DQB2-230ENST00000427449 K7EP34 96 aa7.46□□□□□ -1.22
HLA-DQB2-230ENST00000427449 KRTAP3-1Q9BYR8 98 aa7.46□□□□□ -1.22
HLA-DQB2-230ENST00000427449 COL5A1-AS1Q5SY13 56 aa7.43□□□□□ -1.22
HLA-DQB2-230ENST00000427449 MACF1Q9UPN3 7388 aaKnown RBP7.41□□□□□ -1.22
HLA-DQB2-230ENST00000427449 C4orf26Q17RF5 130 aa7.4□□□□□ -1.22
HLA-DQB2-230ENST00000427449 CXCL6P80162 114 aa7.39□□□□□ -1.23
HLA-DQB2-230ENST00000427449 UBL5Q9BZL1 73 aa7.35□□□□□ -1.23
HLA-DQB2-230ENST00000427449 SYNE2Q8WXH0 6885 aaKnown RBP7.29□□□□□ -1.24
HLA-DQB2-230ENST00000427449 MT1BP07438 61 aa7.28□□□□□ -1.24
HLA-DQB2-230ENST00000427449 ETDBQ3ZM63 59 aa7.28□□□□□ -1.24
HLA-DQB2-230ENST00000427449 LCA10Q71F78 164 aa7.26□□□□□ -1.25
HLA-DQB2-230ENST00000427449 KRTAP3-3Q9BYR6 98 aa7.26□□□□□ -1.25
HLA-DQB2-230ENST00000427449 F8W1H4 67 aa7.25□□□□□ -1.25
HLA-DQB2-230ENST00000427449 C5orf47Q569G3 176 aa7.25□□□□□ -1.25
HLA-DQB2-230ENST00000427449 GTF2H5Q6ZYL4 71 aa7.22□□□□□ -1.25
HLA-DQB2-230ENST00000427449 C1orf64Q8NEQ6 169 aa7.22□□□□□ -1.25
HLA-DQB2-230ENST00000427449 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
HLA-DQB2-230ENST00000427449 S4R3F8 94 aa7.22□□□□□ -1.25
HLA-DQB2-230ENST00000427449 KRTAP19-8Q3LI54 63 aa7.21□□□□□ -1.26
HLA-DQB2-230ENST00000427449 A0A087WVE0 104 aa7.2□□□□□ -1.26
HLA-DQB2-230ENST00000427449 TP53AIP1Q9HCN2 124 aa7.2□□□□□ -1.26
HLA-DQB2-230ENST00000427449 CYP4F30PQ9H0H9 118 aa7.17□□□□□ -1.26
HLA-DQB2-230ENST00000427449 A0A1B0GV90 55 aa7.16□□□□□ -1.26
HLA-DQB2-230ENST00000427449 KRTAP6-3Q3LI67 103 aa7.14□□□□□ -1.27
HLA-DQB2-230ENST00000427449 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
HLA-DQB2-230ENST00000427449 TRAV22A0A0B4J277 110 aa7.1□□□□□ -1.27
HLA-DQB2-230ENST00000427449 FAM240AA0A1B0GVK7 77 aa7.1□□□□□ -1.27
HLA-DQB2-230ENST00000427449 KLKP1Q107X0 134 aa7.08□□□□□ -1.28
HLA-DQB2-230ENST00000427449 FAM236AA0A1B0GUQ0 79 aa7.07□□□□□ -1.28
HLA-DQB2-230ENST00000427449 FAM236BA0A1B0GV22 79 aa7.07□□□□□ -1.28
HLA-DQB2-230ENST00000427449 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
HLA-DQB2-230ENST00000427449 Q5VV11 94 aa7.05□□□□□ -1.28
HLA-DQB2-230ENST00000427449 LOC101927531A0A1B0GV80 90 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms