RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 LINC00472Q9H8W2 130 aa9.35□□□□□ -0.91
AFF3-208ENST00000427118 COX7CP15954 63 aa9.34□□□□□ -0.91
AFF3-208ENST00000427118 NDUFB1O75438 58 aa9.33□□□□□ -0.92
AFF3-208ENST00000427118 Q8N9L7 120 aa9.33□□□□□ -0.92
AFF3-208ENST00000427118 HRCT1Q6UXD1 115 aa9.32□□□□□ -0.92
AFF3-208ENST00000427118 TRAV7A0A075B6U4 112 aa9.31□□□□□ -0.92
AFF3-208ENST00000427118 A8MWP4 228 aa9.31□□□□□ -0.92
AFF3-208ENST00000427118 K7EQZ3 153 aa9.29□□□□□ -0.92
AFF3-208ENST00000427118 DEFB116Q30KQ4 102 aa9.28□□□□□ -0.92
AFF3-208ENST00000427118 PRR15Q8IV56 129 aa9.28□□□□□ -0.92
AFF3-208ENST00000427118 HCG22E2RYF7 251 aa9.27□□□□□ -0.93
AFF3-208ENST00000427118 CCDC179H3BU77 68 aa9.26□□□□□ -0.93
AFF3-208ENST00000427118 ASB16-AS1Q495Z4 193 aa9.26□□□□□ -0.93
AFF3-208ENST00000427118 LINC00304Q8N9R0 145 aa9.26□□□□□ -0.93
AFF3-208ENST00000427118 C4orf48Q5BLP8 95 aa9.25□□□□□ -0.93
AFF3-208ENST00000427118 Q5XG85 94 aa9.24□□□□□ -0.93
AFF3-208ENST00000427118 Q96NJ1 140 aa9.23□□□□□ -0.93
AFF3-208ENST00000427118 LIMD2Q9BT23 127 aa9.23□□□□□ -0.93
AFF3-208ENST00000427118 RNF213Q63HN8 5207 aa9.22□□□□□ -0.93
AFF3-208ENST00000427118 SPAG11AQ6PDA7 123 aa9.22□□□□□ -0.93
AFF3-208ENST00000427118 PRR4Q16378 134 aa9.2□□□□□ -0.94
AFF3-208ENST00000427118 CASC2Q6XLA1 102 aa9.18□□□□□ -0.94
AFF3-208ENST00000427118 OCR1Q9BZK8 76 aa9.18□□□□□ -0.94
AFF3-208ENST00000427118 A0A1B0GVX0 72 aa9.17□□□□□ -0.94
AFF3-208ENST00000427118 SPINK1P00995 79 aa9.17□□□□□ -0.94
AFF3-208ENST00000427118 WFDC13Q8IUB5 93 aa9.16□□□□□ -0.94
AFF3-208ENST00000427118 RPS29P62273 56 aaKnown RBP9.15□□□□□ -0.94
AFF3-208ENST00000427118 RETNLBQ9BQ08 111 aa9.13□□□□□ -0.95
AFF3-208ENST00000427118 MMP24-AS1A0A0U1RRL7 71 aa9.12□□□□□ -0.95
AFF3-208ENST00000427118 hDV103S1A0JD37 113 aa9.12□□□□□ -0.95
AFF3-208ENST00000427118 C8orf17Q9NRJ1 99 aa9.12□□□□□ -0.95
AFF3-208ENST00000427118 IGHV6-1A0A0B4J1U7 121 aa9.11□□□□□ -0.95
AFF3-208ENST00000427118 C8orf87E5RJ46 101 aa9.11□□□□□ -0.95
AFF3-208ENST00000427118 C20orf197Q8N268 126 aa9.11□□□□□ -0.95
AFF3-208ENST00000427118 C5orf47Q569G3 176 aa9.1□□□□□ -0.95
AFF3-208ENST00000427118 KLKP1Q107X0 134 aa9.09□□□□□ -0.95
AFF3-208ENST00000427118 NDUFC1O43677 76 aa9.08□□□□□ -0.96
AFF3-208ENST00000427118 C1orf195Q5TG92 126 aa9.08□□□□□ -0.96
AFF3-208ENST00000427118 TMEM254Q8TBM7 123 aa9.08□□□□□ -0.96
AFF3-208ENST00000427118 TP53AIP1Q9HCN2 124 aa9.07□□□□□ -0.96
AFF3-208ENST00000427118 MP68P56378 58 aa9.04□□□□□ -0.96
AFF3-208ENST00000427118 H3BPC8 53 aa9.03□□□□□ -0.96
AFF3-208ENST00000427118 TMEM258P61165 79 aa9.03□□□□□ -0.96
AFF3-208ENST00000427118 MRPL34Q9BQ48 92 aaKnown RBP9.03□□□□□ -0.96
AFF3-208ENST00000427118 A0A0U1RQV1 116 aa9.01□□□□□ -0.97
AFF3-208ENST00000427118 LINC00313P59037 77 aa9□□□□□ -0.97
AFF3-208ENST00000427118 FP248Q71RG6 208 aaPredicted RBP8.99□□□□□ -0.97
AFF3-208ENST00000427118 SNURFQ9Y675 71 aa8.99□□□□□ -0.97
AFF3-208ENST00000427118 IGLV7-46A0A075B6I9 117 aa8.98□□□□□ -0.97
AFF3-208ENST00000427118 NDUFS5O43920 106 aa8.97□□□□□ -0.97
AFF3-208ENST00000427118 MUC2Q02817 5179 aa8.95□□□□□ -0.98
AFF3-208ENST00000427118 H0Y9P7 68 aa8.95□□□□□ -0.98
AFF3-208ENST00000427118 TRAV22A0A0B4J277 110 aa8.94□□□□□ -0.98
AFF3-208ENST00000427118 CYSTM1Q9H1C7 97 aa8.94□□□□□ -0.98
AFF3-208ENST00000427118 H7BZZ5 65 aa8.93□□□□□ -0.98
AFF3-208ENST00000427118 ATP5EP56381 51 aaPredicted RBP8.93□□□□□ -0.98
AFF3-208ENST00000427118 TPRXLQ17RH7 258 aa8.92□□□□□ -0.98
AFF3-208ENST00000427118 NOTCH2NLQ7Z3S9 236 aa8.92□□□□□ -0.98
AFF3-208ENST00000427118 MUC17Q685J3 4493 aa8.91□□□□□ -0.98
AFF3-208ENST00000427118 ZCCHC13Q8WW36 166 aaKnown RBP8.91□□□□□ -0.98
AFF3-208ENST00000427118 LINC00208Q96KT6 92 aa8.9□□□□□ -0.98
AFF3-208ENST00000427118 FAM236DA0A1B0GTK5 79 aa8.88□□□□□ -0.99
AFF3-208ENST00000427118 FAM236CP0DP71 79 aa8.88□□□□□ -0.99
AFF3-208ENST00000427118 Q8N9P0 234 aaPredicted RBP8.87□□□□□ -0.99
AFF3-208ENST00000427118 C1orf64Q8NEQ6 169 aa8.87□□□□□ -0.99
AFF3-208ENST00000427118 KRTAP13-3Q3SY46 172 aa8.84□□□□□ -0.99
AFF3-208ENST00000427118 KRTAP16-1A8MUX0 517 aa8.81□□□□□ -1
AFF3-208ENST00000427118 RPS28P62857 69 aaKnown RBP8.81□□□□□ -1
AFF3-208ENST00000427118 LOC101927531A0A1B0GV80 90 aa8.8□□□□□ -1
AFF3-208ENST00000427118 SPANXA2-OT1Q8N9U9 137 aa8.76□□□□□ -1.01
AFF3-208ENST00000427118 SERP1Q9Y6X1 66 aa8.76□□□□□ -1.01
AFF3-208ENST00000427118 FAT4Q6V0I7 4981 aa8.76□□□□□ -1.01
AFF3-208ENST00000427118 Q5W150 140 aa8.72□□□□□ -1.01
AFF3-208ENST00000427118 KRTAP4-1Q9BYQ7 146 aa8.71□□□□□ -1.02
AFF3-208ENST00000427118 C9orf92A6NGG3 77 aa8.7□□□□□ -1.02
AFF3-208ENST00000427118 XP32Q5T750 250 aa8.7□□□□□ -1.02
AFF3-208ENST00000427118 CYP4F30PQ9H0H9 118 aa8.7□□□□□ -1.02
AFF3-208ENST00000427118 C20orf166-AS1Q96NR2 134 aa8.68□□□□□ -1.02
AFF3-208ENST00000427118 A8MUU9 505 aa8.66□□□□□ -1.02
AFF3-208ENST00000427118 SEC61BP60468 96 aaKnown RBP8.65□□□□□ -1.02
AFF3-208ENST00000427118 PCOTHQ58A44 107 aa8.65□□□□□ -1.02
AFF3-208ENST00000427118 LCE2AQ5TA79 106 aaPredicted RBP8.65□□□□□ -1.02
AFF3-208ENST00000427118 IGKV2-30P06310 120 aa8.64□□□□□ -1.03
AFF3-208ENST00000427118 Q75L30 129 aa8.6□□□□□ -1.03
AFF3-208ENST00000427118 IGKV2D-30A0A075B6S6 120 aa8.56□□□□□ -1.04
AFF3-208ENST00000427118 C7orf65Q6ZTY9 151 aa8.56□□□□□ -1.04
AFF3-208ENST00000427118 SMIM26A0A096LP01 95 aa8.55□□□□□ -1.04
AFF3-208ENST00000427118 RPL37P61927 97 aaKnown RBP8.54□□□□□ -1.04
AFF3-208ENST00000427118 HRES1P13985 223 aa8.51□□□□□ -1.05
AFF3-208ENST00000427118 ATP11AUNQ6ZP68 121 aa8.5□□□□□ -1.05
AFF3-208ENST00000427118 ACYP2P14621 99 aa8.48□□□□□ -1.05
AFF3-208ENST00000427118 COA5Q86WW8 74 aa8.45□□□□□ -1.06
AFF3-208ENST00000427118 DMAC1Q96GE9 116 aa8.45□□□□□ -1.06
AFF3-208ENST00000427118 KRTAP19-2Q3LHN2 52 aa8.44□□□□□ -1.06
AFF3-208ENST00000427118 LCE2CQ5TA81 110 aa8.44□□□□□ -1.06
AFF3-208ENST00000427118 A8MUN3 132 aa8.41□□□□□ -1.06
AFF3-208ENST00000427118 KRTAP9-2Q9BYQ4 174 aa8.41□□□□□ -1.06
AFF3-208ENST00000427118 SPINK7P58062 85 aa8.4□□□□□ -1.06
AFF3-208ENST00000427118 V9GYY9 64 aa8.4□□□□□ -1.06
AFF3-208ENST00000427118 CHKB-CPT1BH3BT56 60 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms