RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 ACYP1P07311 99 aa7.46□□□□□ -1.22
PRPF39-202ENST00000424478 A0A1B0GW54 56 aa7.45□□□□□ -1.22
PRPF39-202ENST00000424478 C21orf62-AS1Q17RA5 79 aa7.41□□□□□ -1.22
PRPF39-202ENST00000424478 A8MWP4 228 aa7.4□□□□□ -1.23
PRPF39-202ENST00000424478 A0A087WVE0 104 aa7.39□□□□□ -1.23
PRPF39-202ENST00000424478 A0A1B0GVX0 72 aa7.39□□□□□ -1.23
PRPF39-202ENST00000424478 MT-ATP8P03928 68 aa7.39□□□□□ -1.23
PRPF39-202ENST00000424478 HIST1H4AP62805 103 aaKnown RBP7.38□□□□□ -1.23
PRPF39-202ENST00000424478 KRTAP13-3Q3SY46 172 aa7.38□□□□□ -1.23
PRPF39-202ENST00000424478 LINC00643Q86TS7 51 aa7.38□□□□□ -1.23
PRPF39-202ENST00000424478 J3KT08 172 aa7.37□□□□□ -1.23
PRPF39-202ENST00000424478 FP248Q71RG6 208 aaPredicted RBP7.37□□□□□ -1.23
PRPF39-202ENST00000424478 PRR15Q8IV56 129 aa7.37□□□□□ -1.23
PRPF39-202ENST00000424478 WFDC13Q8IUB5 93 aa7.36□□□□□ -1.23
PRPF39-202ENST00000424478 NDUFB1O75438 58 aa7.36□□□□□ -1.23
PRPF39-202ENST00000424478 UBR4Q5T4S7 5183 aa7.35□□□□□ -1.23
PRPF39-202ENST00000424478 LINC00313P59037 77 aa7.34□□□□□ -1.23
PRPF39-202ENST00000424478 CXCL6P80162 114 aa7.34□□□□□ -1.23
PRPF39-202ENST00000424478 C8orf17Q9NRJ1 99 aa7.33□□□□□ -1.24
PRPF39-202ENST00000424478 MMP24-AS1A0A0U1RRL7 71 aa7.32□□□□□ -1.24
PRPF39-202ENST00000424478 XP32Q5T750 250 aa7.31□□□□□ -1.24
PRPF39-202ENST00000424478 MUC2Q02817 5179 aa7.3□□□□□ -1.24
PRPF39-202ENST00000424478 TPRXLQ17RH7 258 aa7.3□□□□□ -1.24
PRPF39-202ENST00000424478 KRTAP16-1A8MUX0 517 aa7.29□□□□□ -1.24
PRPF39-202ENST00000424478 ATP5EP2Q5VTU8 51 aa7.28□□□□□ -1.24
PRPF39-202ENST00000424478 hDV103S1A0JD37 113 aa7.27□□□□□ -1.25
PRPF39-202ENST00000424478 CASC2Q6XLA1 102 aa7.26□□□□□ -1.25
PRPF39-202ENST00000424478 HCG22E2RYF7 251 aa7.26□□□□□ -1.25
PRPF39-202ENST00000424478 RNF213Q63HN8 5207 aa7.25□□□□□ -1.25
PRPF39-202ENST00000424478 NDUFS5O43920 106 aa7.25□□□□□ -1.25
PRPF39-202ENST00000424478 C8orf87E5RJ46 101 aa7.24□□□□□ -1.25
PRPF39-202ENST00000424478 MRPL34Q9BQ48 92 aaKnown RBP7.22□□□□□ -1.25
PRPF39-202ENST00000424478 PCOTHQ58A44 107 aa7.18□□□□□ -1.26
PRPF39-202ENST00000424478 TMEM254Q8TBM7 123 aa7.18□□□□□ -1.26
PRPF39-202ENST00000424478 FAM236AA0A1B0GUQ0 79 aa7.17□□□□□ -1.26
PRPF39-202ENST00000424478 FAM236BA0A1B0GV22 79 aa7.17□□□□□ -1.26
PRPF39-202ENST00000424478 C20orf166-AS1Q96NR2 134 aa7.17□□□□□ -1.26
PRPF39-202ENST00000424478 A8MUU9 505 aa7.17□□□□□ -1.26
PRPF39-202ENST00000424478 RPL37P61927 97 aaKnown RBP7.17□□□□□ -1.26
PRPF39-202ENST00000424478 Q8N9P0 234 aaPredicted RBP7.16□□□□□ -1.26
PRPF39-202ENST00000424478 Q5W150 140 aa7.15□□□□□ -1.27
PRPF39-202ENST00000424478 Q75L30 129 aa7.14□□□□□ -1.27
PRPF39-202ENST00000424478 SCGB1A1P11684 91 aa7.12□□□□□ -1.27
PRPF39-202ENST00000424478 IMUPQ9GZP8 106 aa7.12□□□□□ -1.27
PRPF39-202ENST00000424478 KRTAP4-1Q9BYQ7 146 aa7.11□□□□□ -1.27
PRPF39-202ENST00000424478 ATP11AUNQ6ZP68 121 aa7.11□□□□□ -1.27
PRPF39-202ENST00000424478 ZCCHC13Q8WW36 166 aaKnown RBP7.08□□□□□ -1.28
PRPF39-202ENST00000424478 MUC17Q685J3 4493 aa7.08□□□□□ -1.28
PRPF39-202ENST00000424478 OCR1Q9BZK8 76 aa7.05□□□□□ -1.28
PRPF39-202ENST00000424478 SEC61BP60468 96 aaKnown RBP7.05□□□□□ -1.28
PRPF39-202ENST00000424478 IGKV2D-30A0A075B6S6 120 aa7.02□□□□□ -1.29
PRPF39-202ENST00000424478 IGKV2-30P06310 120 aa7.02□□□□□ -1.29
PRPF39-202ENST00000424478 FAT4Q6V0I7 4981 aa7□□□□□ -1.29
PRPF39-202ENST00000424478 TRAV22A0A0B4J277 110 aa6.99□□□□□ -1.29
PRPF39-202ENST00000424478 H0Y9P7 68 aa6.99□□□□□ -1.29
PRPF39-202ENST00000424478 TP53AIP1Q9HCN2 124 aa6.98□□□□□ -1.29
PRPF39-202ENST00000424478 SPINK7P58062 85 aa6.98□□□□□ -1.29
PRPF39-202ENST00000424478 ATOX1O00244 68 aa6.96□□□□□ -1.3
PRPF39-202ENST00000424478 UQCRQO14949 82 aa6.96□□□□□ -1.3
PRPF39-202ENST00000424478 LINC00208Q96KT6 92 aa6.96□□□□□ -1.3
PRPF39-202ENST00000424478 TRAV7A0A075B6U4 112 aa6.93□□□□□ -1.3
PRPF39-202ENST00000424478 SNURFQ9Y675 71 aa6.92□□□□□ -1.3
PRPF39-202ENST00000424478 C1orf64Q8NEQ6 169 aa6.92□□□□□ -1.3
PRPF39-202ENST00000424478 ANAPC13Q9BS18 74 aa6.9□□□□□ -1.31
PRPF39-202ENST00000424478 SERP2Q8N6R1 65 aa6.9□□□□□ -1.31
PRPF39-202ENST00000424478 MP68P56378 58 aa6.88□□□□□ -1.31
PRPF39-202ENST00000424478 C7orf65Q6ZTY9 151 aa6.88□□□□□ -1.31
PRPF39-202ENST00000424478 C20orf197Q8N268 126 aa6.88□□□□□ -1.31
PRPF39-202ENST00000424478 C4orf26Q17RF5 130 aa6.87□□□□□ -1.31
PRPF39-202ENST00000424478 C5orf47Q569G3 176 aa6.87□□□□□ -1.31
PRPF39-202ENST00000424478 CYP4F30PQ9H0H9 118 aa6.87□□□□□ -1.31
PRPF39-202ENST00000424478 HRES1P13985 223 aa6.87□□□□□ -1.31
PRPF39-202ENST00000424478 KLKP1Q107X0 134 aa6.87□□□□□ -1.31
PRPF39-202ENST00000424478 SMIM20Q8N5G0 67 aa6.85□□□□□ -1.31
PRPF39-202ENST00000424478 CYSTM1Q9H1C7 97 aa6.84□□□□□ -1.31
PRPF39-202ENST00000424478 LOC101927531A0A1B0GV80 90 aa6.83□□□□□ -1.32
PRPF39-202ENST00000424478 COX7CP15954 63 aa6.82□□□□□ -1.32
PRPF39-202ENST00000424478 CCDC179H3BU77 68 aa6.82□□□□□ -1.32
PRPF39-202ENST00000424478 A0A0U1RQV1 116 aa6.81□□□□□ -1.32
PRPF39-202ENST00000424478 KRTAP19-2Q3LHN2 52 aa6.8□□□□□ -1.32
PRPF39-202ENST00000424478 COX6B2Q6YFQ2 88 aa6.78□□□□□ -1.32
PRPF39-202ENST00000424478 FAM236DA0A1B0GTK5 79 aa6.77□□□□□ -1.32
PRPF39-202ENST00000424478 FAM236CP0DP71 79 aa6.77□□□□□ -1.32
PRPF39-202ENST00000424478 MPLKIPQ8TAP9 179 aa6.76□□□□□ -1.33
PRPF39-202ENST00000424478 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
PRPF39-202ENST00000424478 KRTAP3-1Q9BYR8 98 aa6.75□□□□□ -1.33
PRPF39-202ENST00000424478 RBM12B-AS1Q9P1G2 102 aa6.73□□□□□ -1.33
PRPF39-202ENST00000424478 H3BPC8 53 aa6.73□□□□□ -1.33
PRPF39-202ENST00000424478 FLGP20930 4061 aaPredicted RBP6.71□□□□□ -1.34
PRPF39-202ENST00000424478 PCP4P48539 62 aa6.67□□□□□ -1.34
PRPF39-202ENST00000424478 H7BZZ5 65 aa6.65□□□□□ -1.34
PRPF39-202ENST00000424478 MT1HP80294 61 aa6.63□□□□□ -1.35
PRPF39-202ENST00000424478 H1FX-AS1Q4G0G2 97 aa6.61□□□□□ -1.35
PRPF39-202ENST00000424478 M0R2T5 61 aa6.59□□□□□ -1.36
PRPF39-202ENST00000424478 LCA10Q71F78 164 aa6.56□□□□□ -1.36
PRPF39-202ENST00000424478 DMAC1Q96GE9 116 aa6.56□□□□□ -1.36
PRPF39-202ENST00000424478 S4R3F8 94 aa6.53□□□□□ -1.36
PRPF39-202ENST00000424478 NDUFC1O43677 76 aa6.53□□□□□ -1.36
PRPF39-202ENST00000424478 LCE2AQ5TA79 106 aaPredicted RBP6.51□□□□□ -1.37
PRPF39-202ENST00000424478 SPANXA2-OT1Q8N9U9 137 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms