RNA–Protein interactions for RNA: ENST00000424155.6

TMED3-202, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 3 BASIC

Gene TMED3, Length 16,555 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-202ENST00000424155 ATMQ13315 3056 aa3.31□□□□□ -1.88
TMED3-202ENST00000424155 ZZEF1O43149 2961 aa3.31□□□□□ -1.88
TMED3-202ENST00000424155 MAP1AP78559 2803 aaPredicted RBP3.3□□□□□ -1.88
TMED3-202ENST00000424155 XIRP2A4UGR9 3374 aa3.29□□□□□ -1.88
TMED3-202ENST00000424155 TRANK1O15050 2925 aa3.29□□□□□ -1.88
TMED3-202ENST00000424155 ADGRG4Q8IZF6 3080 aa3.29□□□□□ -1.88
TMED3-202ENST00000424155 UTP20O75691 2785 aaKnown RBP3.29□□□□□ -1.88
TMED3-202ENST00000424155 LRBAP50851 2863 aa3.28□□□□□ -1.88
TMED3-202ENST00000424155 KMT2BQ9UMN6 2715 aaPredicted RBP3.27□□□□□ -1.89
TMED3-202ENST00000424155 CFAP46Q8IYW2 2715 aa3.27□□□□□ -1.89
TMED3-202ENST00000424155 LAMA3Q16787 3333 aa3.27□□□□□ -1.89
TMED3-202ENST00000424155 GCN1Q92616 2671 aaKnown RBP3.27□□□□□ -1.89
TMED3-202ENST00000424155 KRTAP12-2P59991 146 aa3.26□□□□□ -1.89
TMED3-202ENST00000424155 SZT2Q5T011 3432 aa3.25□□□□□ -1.89
TMED3-202ENST00000424155 SETXQ7Z333 2677 aaKnown RBP3.25□□□□□ -1.89
TMED3-202ENST00000424155 FLNAP21333 2647 aaKnown RBP3.25□□□□□ -1.89
TMED3-202ENST00000424155 KRTAP3-1Q9BYR8 98 aa3.23□□□□□ -1.89
TMED3-202ENST00000424155 KRTAP12-1P59990 96 aa3.22□□□□□ -1.89
TMED3-202ENST00000424155 CHD9Q3L8U1 2897 aa3.22□□□□□ -1.89
TMED3-202ENST00000424155 INE1O15225 51 aa3.22□□□□□ -1.89
TMED3-202ENST00000424155 DCHS1Q96JQ0 3298 aa3.21□□□□□ -1.89
TMED3-202ENST00000424155 PRO2289Q9P1D8 64 aa3.21□□□□□ -1.89
TMED3-202ENST00000424155 DMXL1Q9Y485 3027 aa3.2□□□□□ -1.9
TMED3-202ENST00000424155 KRTAP10-6P60371 365 aaPredicted RBP3.19□□□□□ -1.9
TMED3-202ENST00000424155 XP32Q5T750 250 aa3.19□□□□□ -1.9
TMED3-202ENST00000424155 Q5VSD8 79 aa3.18□□□□□ -1.9
TMED3-202ENST00000424155 KRTAP13-4Q3LI77 160 aa3.17□□□□□ -1.9
TMED3-202ENST00000424155 KRTAP1-4P0C5Y4 121 aa3.16□□□□□ -1.9
TMED3-202ENST00000424155 LAMA1P25391 3075 aa3.16□□□□□ -1.9
TMED3-202ENST00000424155 APCP25054 2843 aa3.16□□□□□ -1.9
TMED3-202ENST00000424155 CRYBG3Q68DQ2 2970 aa3.16□□□□□ -1.9
TMED3-202ENST00000424155 TNRC18O15417 2968 aaPredicted RBP3.15□□□□□ -1.91
TMED3-202ENST00000424155 VCANP13611 3396 aa3.14□□□□□ -1.91
TMED3-202ENST00000424155 PDZD2O15018 2839 aa3.13□□□□□ -1.91
TMED3-202ENST00000424155 HIVEP1P15822 2718 aa3.13□□□□□ -1.91
TMED3-202ENST00000424155 DNAH14Q0VDD8 3507 aa3.13□□□□□ -1.91
TMED3-202ENST00000424155 DCHS2Q6V1P9 2916 aa3.1□□□□□ -1.91
TMED3-202ENST00000424155 KRTAP3-2Q9BYR7 98 aa3.1□□□□□ -1.91
TMED3-202ENST00000424155 TENM2Q9NT68 2774 aa3.09□□□□□ -1.91
TMED3-202ENST00000424155 TGP01266 2768 aa3.08□□□□□ -1.92
TMED3-202ENST00000424155 BRCA2P51587 3418 aa3.07□□□□□ -1.92
TMED3-202ENST00000424155 TENM3Q9P273 2699 aa3.07□□□□□ -1.92
TMED3-202ENST00000424155 TENM4Q6N022 2769 aa3.06□□□□□ -1.92
TMED3-202ENST00000424155 SPEGQ15772 3267 aa3.04□□□□□ -1.92
TMED3-202ENST00000424155 A0A1B0GVY2 172 aa3.03□□□□□ -1.92
TMED3-202ENST00000424155 ITPR2Q14571 2701 aa3.03□□□□□ -1.92
TMED3-202ENST00000424155 NF1P21359 2839 aa3.02□□□□□ -1.93
TMED3-202ENST00000424155 KRTAP23-1A1A580 65 aa3.01□□□□□ -1.93
TMED3-202ENST00000424155 EYSQ5T1H1 3165 aa3.01□□□□□ -1.93
TMED3-202ENST00000424155 CELSR1Q9NYQ6 3014 aa3□□□□□ -1.93
TMED3-202ENST00000424155 LOC400499M0QZD8 3231 aa3□□□□□ -1.93
TMED3-202ENST00000424155 NIPBLQ6KC79 2804 aaeCLIP2.99□□□□□ -1.93
TMED3-202ENST00000424155 TENM1Q9UKZ4 2725 aa2.98□□□□□ -1.93
TMED3-202ENST00000424155 KRTAP3-3Q9BYR6 98 aa2.95□□□□□ -1.94
TMED3-202ENST00000424155 USP34Q70CQ2 3546 aa2.95□□□□□ -1.94
TMED3-202ENST00000424155 FBN2P35556 2912 aa2.95□□□□□ -1.94
TMED3-202ENST00000424155 ZANQ9Y493 2812 aa2.94□□□□□ -1.94
TMED3-202ENST00000424155 COL7A1Q02388 2944 aa2.93□□□□□ -1.94
TMED3-202ENST00000424155 KRTAP21-3Q3LHN1 58 aa2.93□□□□□ -1.94
TMED3-202ENST00000424155 KRTAP10-10P60014 251 aa2.93□□□□□ -1.94
TMED3-202ENST00000424155 OTOGQ6ZRI0 2925 aa2.9□□□□□ -1.95
TMED3-202ENST00000424155 MYO15AQ9UKN7 3530 aa2.9□□□□□ -1.95
TMED3-202ENST00000424155 SRRM2Q9UQ35 2752 aaKnown RBP2.88□□□□□ -1.95
TMED3-202ENST00000424155 PKD1L1Q8TDX9 2849 aa2.84□□□□□ -1.95
TMED3-202ENST00000424155 ZFHX3Q15911 3703 aa2.84□□□□□ -1.96
TMED3-202ENST00000424155 FLNCQ14315 2725 aa2.83□□□□□ -1.96
TMED3-202ENST00000424155 DNAH11Q96DT5 4516 aa2.81□□□□□ -1.96
TMED3-202ENST00000424155 RELNP78509 3460 aa2.8□□□□□ -1.96
TMED3-202ENST00000424155 SPTBN5Q9NRC6 3674 aaKnown RBP2.79□□□□□ -1.96
TMED3-202ENST00000424155 CSMD1Q96PZ7 3565 aa2.78□□□□□ -1.97
TMED3-202ENST00000424155 WDFY3Q8IZQ1 3526 aa2.78□□□□□ -1.97
TMED3-202ENST00000424155 MEGF8Q7Z7M0 2845 aa2.76□□□□□ -1.97
TMED3-202ENST00000424155 CUBNO60494 3623 aa2.76□□□□□ -1.97
TMED3-202ENST00000424155 ZFHX4Q86UP3 3567 aa2.75□□□□□ -1.97
TMED3-202ENST00000424155 FBN3Q75N90 2809 aa2.74□□□□□ -1.97
TMED3-202ENST00000424155 DNAH10Q8IVF4 4471 aa2.74□□□□□ -1.97
TMED3-202ENST00000424155 VWFP04275 2813 aa2.73□□□□□ -1.97
TMED3-202ENST00000424155 KRTAP12-3P60328 96 aa2.71□□□□□ -1.98
TMED3-202ENST00000424155 LCE3AQ5TA76 89 aa2.69□□□□□ -1.98
TMED3-202ENST00000424155 MXRA5Q9NR99 2828 aa2.68□□□□□ -1.98
TMED3-202ENST00000424155 ALMS1Q8TCU4 4167 aa2.67□□□□□ -1.98
TMED3-202ENST00000424155 NBPF19A0A087WUL8 3843 aa2.66□□□□□ -1.98
TMED3-202ENST00000424155 KRTAP10-12P60413 245 aa2.66□□□□□ -1.98
TMED3-202ENST00000424155 LORP23490 312 aaPredicted RBP2.65□□□□□ -1.98
TMED3-202ENST00000424155 ASPMQ8IZT6 3477 aa2.65□□□□□ -1.99
TMED3-202ENST00000424155 DNAH2Q9P225 4427 aa2.64□□□□□ -1.99
TMED3-202ENST00000424155 SVEP1Q4LDE5 3571 aa2.63□□□□□ -1.99
TMED3-202ENST00000424155 SMG1Q96Q15 3661 aaKnown RBP2.62□□□□□ -1.99
TMED3-202ENST00000424155 DNAH8Q96JB1 4490 aa2.61□□□□□ -1.99
TMED3-202ENST00000424155 ANK3Q12955 4377 aaKnown RBP2.6□□□□□ -1.99
TMED3-202ENST00000424155 KRTAP10-5P60370 271 aa2.59□□□□□ -1.99
TMED3-202ENST00000424155 DNAH1Q9P2D7 4330 aa2.58□□□□□ -2
TMED3-202ENST00000424155 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
TMED3-202ENST00000424155 FBN1P35555 2871 aaKnown RBP2.57□□□□□ -2
TMED3-202ENST00000424155 CRCT1Q9UGL9 99 aa2.57□□□□□ -2
TMED3-202ENST00000424155 HUWE1Q7Z6Z7 4374 aaKnown RBP2.57□□□□□ -2
TMED3-202ENST00000424155 CSMD3Q7Z407 3707 aa2.57□□□□□ -2
TMED3-202ENST00000424155 TRRAPQ9Y4A5 3859 aa2.56□□□□□ -2
TMED3-202ENST00000424155 HRNRQ86YZ3 2850 aaPredicted RBP2.56□□□□□ -2
TMED3-202ENST00000424155 LAMA5O15230 3695 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms