RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 TRBV20-1A0A075B6N2 111 aa11.33□□□□□ -0.6
TRAF4-204ENST00000422344 KRTAP16-1A8MUX0 517 aa11.33□□□□□ -0.6
TRAF4-204ENST00000422344 NOTCH2NLQ7Z3S9 236 aa11.33□□□□□ -0.6
TRAF4-204ENST00000422344 J3KT08 172 aa11.32□□□□□ -0.6
TRAF4-204ENST00000422344 FLGP20930 4061 aaPredicted RBP11.31□□□□□ -0.6
TRAF4-204ENST00000422344 A0A1B0GVX0 72 aa11.31□□□□□ -0.6
TRAF4-204ENST00000422344 C8orf87E5RJ46 101 aa11.31□□□□□ -0.6
TRAF4-204ENST00000422344 Q6ZQT0 140 aa11.31□□□□□ -0.6
TRAF4-204ENST00000422344 LOC110117498A0A087WWA1 95 aa11.3□□□□□ -0.6
TRAF4-204ENST00000422344 LOC105371267A0A1B0GV96 52 aa11.3□□□□□ -0.6
TRAF4-204ENST00000422344 PDE6GP18545 87 aa11.3□□□□□ -0.6
TRAF4-204ENST00000422344 A0A1B0GW54 56 aa11.27□□□□□ -0.61
TRAF4-204ENST00000422344 C14orf132Q9NPU4 83 aa11.26□□□□□ -0.61
TRAF4-204ENST00000422344 NDUFB1O75438 58 aa11.25□□□□□ -0.61
TRAF4-204ENST00000422344 C9orf118A6NHY6 69 aa11.23□□□□□ -0.61
TRAF4-204ENST00000422344 A0A1W2PPM0 123 aa11.18□□□□□ -0.62
TRAF4-204ENST00000422344 TAX1BP3O14907 124 aa11.18□□□□□ -0.62
TRAF4-204ENST00000422344 A8MWP4 228 aa11.16□□□□□ -0.62
TRAF4-204ENST00000422344 H3BT86 120 aa11.16□□□□□ -0.62
TRAF4-204ENST00000422344 NREPQ16612 68 aa11.14□□□□□ -0.63
TRAF4-204ENST00000422344 FAM236DA0A1B0GTK5 79 aa11.13□□□□□ -0.63
TRAF4-204ENST00000422344 FAM236CP0DP71 79 aa11.13□□□□□ -0.63
TRAF4-204ENST00000422344 MTURNQ8N3F0 131 aa11.12□□□□□ -0.63
TRAF4-204ENST00000422344 C8orf17Q9NRJ1 99 aa11.11□□□□□ -0.63
TRAF4-204ENST00000422344 RBM12B-AS1Q9P1G2 102 aa11.11□□□□□ -0.63
TRAF4-204ENST00000422344 ZCCHC13Q8WW36 166 aaKnown RBP11.1□□□□□ -0.63
TRAF4-204ENST00000422344 IGKV3D-7A0A0C4DH55 119 aa11.09□□□□□ -0.63
TRAF4-204ENST00000422344 Q8N9P0 234 aaPredicted RBP11.06□□□□□ -0.64
TRAF4-204ENST00000422344 HRES1P13985 223 aa11.05□□□□□ -0.64
TRAF4-204ENST00000422344 SPCS1Q9Y6A9 102 aa11.05□□□□□ -0.64
TRAF4-204ENST00000422344 KRTAP9-7A8MTY7 169 aa11.04□□□□□ -0.64
TRAF4-204ENST00000422344 PRR15Q8IV56 129 aa11.04□□□□□ -0.64
TRAF4-204ENST00000422344 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.03□□□□□ -0.64
TRAF4-204ENST00000422344 Q6ZVQ6 151 aa11.03□□□□□ -0.64
TRAF4-204ENST00000422344 MPLKIPQ8TAP9 179 aa11□□□□□ -0.65
TRAF4-204ENST00000422344 SPINK7P58062 85 aa10.98□□□□□ -0.65
TRAF4-204ENST00000422344 COL5A1-AS1Q5SY13 56 aa10.98□□□□□ -0.65
TRAF4-204ENST00000422344 USH2AO75445 5202 aa10.96□□□□□ -0.66
TRAF4-204ENST00000422344 SSPOA2VEC9 5147 aa10.96□□□□□ -0.66
TRAF4-204ENST00000422344 BPY2O14599 106 aa10.95□□□□□ -0.66
TRAF4-204ENST00000422344 TMEM254Q8TBM7 123 aa10.95□□□□□ -0.66
TRAF4-204ENST00000422344 MMP24-AS1A0A0U1RRL7 71 aa10.94□□□□□ -0.66
TRAF4-204ENST00000422344 K7EQZ3 153 aa10.94□□□□□ -0.66
TRAF4-204ENST00000422344 MRPL34Q9BQ48 92 aaKnown RBP10.94□□□□□ -0.66
TRAF4-204ENST00000422344 hDV103S1A0JD37 113 aa10.91□□□□□ -0.66
TRAF4-204ENST00000422344 NDUFS5O43920 106 aa10.89□□□□□ -0.67
TRAF4-204ENST00000422344 SMCPP49901 116 aaPredicted RBP10.89□□□□□ -0.67
TRAF4-204ENST00000422344 KRTAP9-8Q9BYQ0 159 aa10.89□□□□□ -0.67
TRAF4-204ENST00000422344 K7EP34 96 aa10.86□□□□□ -0.67
TRAF4-204ENST00000422344 WFDC13Q8IUB5 93 aa10.84□□□□□ -0.67
TRAF4-204ENST00000422344 PRO0461Q9UI25 63 aa10.82□□□□□ -0.68
TRAF4-204ENST00000422344 Q8N9L7 120 aa10.79□□□□□ -0.68
TRAF4-204ENST00000422344 UBL5Q9BZL1 73 aa10.79□□□□□ -0.68
TRAF4-204ENST00000422344 FCGBPQ9Y6R7 5405 aaPredicted RBP10.78□□□□□ -0.68
TRAF4-204ENST00000422344 CASC2Q6XLA1 102 aa10.77□□□□□ -0.69
TRAF4-204ENST00000422344 GTF2H5Q6ZYL4 71 aa10.77□□□□□ -0.69
TRAF4-204ENST00000422344 PCP4L1A6NKN8 68 aa10.75□□□□□ -0.69
TRAF4-204ENST00000422344 LINC00846Q9NV44 126 aa10.74□□□□□ -0.69
TRAF4-204ENST00000422344 MT2AP02795 61 aa10.73□□□□□ -0.69
TRAF4-204ENST00000422344 HCG22E2RYF7 251 aa10.7□□□□□ -0.7
TRAF4-204ENST00000422344 IGKV2D-30A0A075B6S6 120 aa10.69□□□□□ -0.7
TRAF4-204ENST00000422344 IGKV2-30P06310 120 aa10.69□□□□□ -0.7
TRAF4-204ENST00000422344 F8W1H4 67 aa10.67□□□□□ -0.7
TRAF4-204ENST00000422344 Q5W150 140 aa10.67□□□□□ -0.7
TRAF4-204ENST00000422344 KRTAP19-1Q8IUB9 90 aa10.67□□□□□ -0.7
TRAF4-204ENST00000422344 C7orf65Q6ZTY9 151 aa10.66□□□□□ -0.7
TRAF4-204ENST00000422344 KRTAP10-10P60014 251 aa10.65□□□□□ -0.7
TRAF4-204ENST00000422344 LCE2BO14633 110 aa10.64□□□□□ -0.71
TRAF4-204ENST00000422344 MT1FP04733 61 aa10.64□□□□□ -0.71
TRAF4-204ENST00000422344 CXCL6P80162 114 aa10.64□□□□□ -0.71
TRAF4-204ENST00000422344 ETDBQ3ZM63 59 aa10.61□□□□□ -0.71
TRAF4-204ENST00000422344 H1FX-AS1Q4G0G2 97 aa10.6□□□□□ -0.71
TRAF4-204ENST00000422344 KRTAP9-3Q9BYQ3 159 aa10.56□□□□□ -0.72
TRAF4-204ENST00000422344 MACF1Q9UPN3 7388 aaKnown RBP10.52□□□□□ -0.73
TRAF4-204ENST00000422344 C4orf26Q17RF5 130 aa10.47□□□□□ -0.73
TRAF4-204ENST00000422344 SYNE2Q8WXH0 6885 aaKnown RBP10.47□□□□□ -0.73
TRAF4-204ENST00000422344 TP53AIP1Q9HCN2 124 aa10.45□□□□□ -0.74
TRAF4-204ENST00000422344 ACYP1P07311 99 aa10.41□□□□□ -0.74
TRAF4-204ENST00000422344 FAM240AA0A1B0GVK7 77 aa10.32□□□□□ -0.76
TRAF4-204ENST00000422344 KRTAP19-6Q3LI70 58 aa10.32□□□□□ -0.76
TRAF4-204ENST00000422344 ATP5EP2Q5VTU8 51 aa10.31□□□□□ -0.76
TRAF4-204ENST00000422344 C1orf64Q8NEQ6 169 aa10.3□□□□□ -0.76
TRAF4-204ENST00000422344 HIST1H4AP62805 103 aaKnown RBP10.26□□□□□ -0.77
TRAF4-204ENST00000422344 S4R3F8 94 aa10.26□□□□□ -0.77
TRAF4-204ENST00000422344 C5orf47Q569G3 176 aa10.25□□□□□ -0.77
TRAF4-204ENST00000422344 KRTAP3-1Q9BYR8 98 aa10.25□□□□□ -0.77
TRAF4-204ENST00000422344 TRAV22A0A0B4J277 110 aa10.23□□□□□ -0.77
TRAF4-204ENST00000422344 CYP4F30PQ9H0H9 118 aa10.2□□□□□ -0.78
TRAF4-204ENST00000422344 LOC101927531A0A1B0GV80 90 aa10.18□□□□□ -0.78
TRAF4-204ENST00000422344 CSAG1Q6PB30 78 aa10.18□□□□□ -0.78
TRAF4-204ENST00000422344 FAM236AA0A1B0GUQ0 79 aa10.15□□□□□ -0.78
TRAF4-204ENST00000422344 FAM236BA0A1B0GV22 79 aa10.15□□□□□ -0.78
TRAF4-204ENST00000422344 LCA10Q71F78 164 aa10.15□□□□□ -0.78
TRAF4-204ENST00000422344 UQCRQO14949 82 aa10.14□□□□□ -0.79
TRAF4-204ENST00000422344 KRTAP6-3Q3LI67 103 aa10.14□□□□□ -0.79
TRAF4-204ENST00000422344 LINC00643Q86TS7 51 aa10.14□□□□□ -0.79
TRAF4-204ENST00000422344 A0A1B0GV90 55 aa10.13□□□□□ -0.79
TRAF4-204ENST00000422344 ATOX1O00244 68 aa10.1□□□□□ -0.79
TRAF4-204ENST00000422344 H0Y9P7 68 aa10.09□□□□□ -0.79
TRAF4-204ENST00000422344 A0A087WVE0 104 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms