RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 RPL37P61927 97 aaKnown RBP8.34□□□□□ -1.07
AP000550.1-201ENST00000420508 A8MUU9 505 aa8.28□□□□□ -1.08
AP000550.1-201ENST00000420508 C20orf166-AS1Q96NR2 134 aa8.27□□□□□ -1.09
AP000550.1-201ENST00000420508 ROMO1P60602 79 aa8.24□□□□□ -1.09
AP000550.1-201ENST00000420508 STAB2Q8WWQ8 2551 aa8.23□□□□□ -1.09
AP000550.1-201ENST00000420508 R4GN34 69 aa8.22□□□□□ -1.09
AP000550.1-201ENST00000420508 A6NN06 94 aa8.22□□□□□ -1.09
AP000550.1-201ENST00000420508 CAMK2N1Q7Z7J9 78 aa8.22□□□□□ -1.09
AP000550.1-201ENST00000420508 KRTAP1-4P0C5Y4 121 aa8.22□□□□□ -1.09
AP000550.1-201ENST00000420508 LOC400499M0QZD8 3231 aa8.2□□□□□ -1.1
AP000550.1-201ENST00000420508 PRAC1Q96KF2 57 aa8.19□□□□□ -1.1
AP000550.1-201ENST00000420508 MXRA5Q9NR99 2828 aa8.13□□□□□ -1.11
AP000550.1-201ENST00000420508 M0QZ58 72 aa8.11□□□□□ -1.11
AP000550.1-201ENST00000420508 ADM2Q7Z4H4 148 aa8.1□□□□□ -1.11
AP000550.1-201ENST00000420508 FBN2P35556 2912 aa8.1□□□□□ -1.11
AP000550.1-201ENST00000420508 CELSR2Q9HCU4 2923 aa8.1□□□□□ -1.11
AP000550.1-201ENST00000420508 LUZP6Q538Z0 58 aa8.09□□□□□ -1.11
AP000550.1-201ENST00000420508 SPEGQ15772 3267 aa8.09□□□□□ -1.11
AP000550.1-201ENST00000420508 PDZD2O15018 2839 aa8.06□□□□□ -1.12
AP000550.1-201ENST00000420508 DCHS2Q6V1P9 2916 aa8.06□□□□□ -1.12
AP000550.1-201ENST00000420508 KRTAP16-1A8MUX0 517 aa8.06□□□□□ -1.12
AP000550.1-201ENST00000420508 NF1P21359 2839 aa8.06□□□□□ -1.12
AP000550.1-201ENST00000420508 TENM4Q6N022 2769 aa8.06□□□□□ -1.12
AP000550.1-201ENST00000420508 M0R2T5 61 aa8.02□□□□□ -1.13
AP000550.1-201ENST00000420508 DMBT1Q9UGM3 2413 aaPredicted RBP8.01□□□□□ -1.13
AP000550.1-201ENST00000420508 ASH1LQ9NR48 2969 aaKnown RBP8□□□□□ -1.13
AP000550.1-201ENST00000420508 CRYBG3Q68DQ2 2970 aa7.96□□□□□ -1.14
AP000550.1-201ENST00000420508 CFAP47Q6ZTR5 3102 aa7.95□□□□□ -1.14
AP000550.1-201ENST00000420508 KRTAP25-1Q3LHN0 102 aa7.95□□□□□ -1.14
AP000550.1-201ENST00000420508 KRTAP13-3Q3SY46 172 aa7.95□□□□□ -1.14
AP000550.1-201ENST00000420508 XP32Q5T750 250 aa7.89□□□□□ -1.15
AP000550.1-201ENST00000420508 TENM3Q9P273 2699 aa7.88□□□□□ -1.15
AP000550.1-201ENST00000420508 A8MU10 97 aa7.87□□□□□ -1.15
AP000550.1-201ENST00000420508 TPRXLQ17RH7 258 aa7.87□□□□□ -1.15
AP000550.1-201ENST00000420508 MYO15AQ9UKN7 3530 aa7.87□□□□□ -1.15
AP000550.1-201ENST00000420508 A0A1B0GVY2 172 aa7.84□□□□□ -1.15
AP000550.1-201ENST00000420508 PLAC4Q8WY50 150 aa7.83□□□□□ -1.16
AP000550.1-201ENST00000420508 CELSR1Q9NYQ6 3014 aa7.79□□□□□ -1.16
AP000550.1-201ENST00000420508 ANK3Q12955 4377 aaKnown RBP7.76□□□□□ -1.17
AP000550.1-201ENST00000420508 KRTAP10-8P60410 259 aa7.75□□□□□ -1.17
AP000550.1-201ENST00000420508 RELNP78509 3460 aa7.72□□□□□ -1.17
AP000550.1-201ENST00000420508 OTOGQ6ZRI0 2925 aa7.71□□□□□ -1.17
AP000550.1-201ENST00000420508 WDFY3Q8IZQ1 3526 aa7.71□□□□□ -1.17
AP000550.1-201ENST00000420508 TENM1Q9UKZ4 2725 aa7.71□□□□□ -1.18
AP000550.1-201ENST00000420508 A0A0A0MQY5 61 aa7.69□□□□□ -1.18
AP000550.1-201ENST00000420508 H0YAA0 97 aa7.69□□□□□ -1.18
AP000550.1-201ENST00000420508 H3BS24 57 aa7.66□□□□□ -1.18
AP000550.1-201ENST00000420508 FLG2Q5D862 2391 aaPredicted RBP7.63□□□□□ -1.19
AP000550.1-201ENST00000420508 PP632Q6XCG6 107 aa7.62□□□□□ -1.19
AP000550.1-201ENST00000420508 TNP1P09430 55 aa7.57□□□□□ -1.2
AP000550.1-201ENST00000420508 DMDP11532 3685 aa7.56□□□□□ -1.2
AP000550.1-201ENST00000420508 LAMA5O15230 3695 aa7.54□□□□□ -1.2
AP000550.1-201ENST00000420508 DCHS1Q96JQ0 3298 aa7.54□□□□□ -1.2
AP000550.1-201ENST00000420508 VWFP04275 2813 aa7.54□□□□□ -1.2
AP000550.1-201ENST00000420508 ZFHX4Q86UP3 3567 aa7.51□□□□□ -1.21
AP000550.1-201ENST00000420508 ASPMQ8IZT6 3477 aa7.51□□□□□ -1.21
AP000550.1-201ENST00000420508 TENM2Q9NT68 2774 aa7.49□□□□□ -1.21
AP000550.1-201ENST00000420508 BSNQ9UPA5 3926 aa7.49□□□□□ -1.21
AP000550.1-201ENST00000420508 TGP01266 2768 aa7.46□□□□□ -1.21
AP000550.1-201ENST00000420508 MUC3AQ02505 3323 aa7.44□□□□□ -1.22
AP000550.1-201ENST00000420508 SMG1Q96Q15 3661 aaKnown RBP7.43□□□□□ -1.22
AP000550.1-201ENST00000420508 P0C880 135 aa7.41□□□□□ -1.22
AP000550.1-201ENST00000420508 NBPF19A0A087WUL8 3843 aa7.37□□□□□ -1.23
AP000550.1-201ENST00000420508 KRTAP3-1Q9BYR8 98 aa7.36□□□□□ -1.23
AP000550.1-201ENST00000420508 FBN1P35555 2871 aaKnown RBP7.36□□□□□ -1.23
AP000550.1-201ENST00000420508 CSMD1Q96PZ7 3565 aa7.34□□□□□ -1.24
AP000550.1-201ENST00000420508 SPENQ96T58 3664 aaKnown RBP7.28□□□□□ -1.24
AP000550.1-201ENST00000420508 NDUFAF8A1L188 74 aa7.27□□□□□ -1.25
AP000550.1-201ENST00000420508 C10orf95Q9H7T3 257 aa7.25□□□□□ -1.25
AP000550.1-201ENST00000420508 HUWE1Q7Z6Z7 4374 aaKnown RBP7.24□□□□□ -1.25
AP000550.1-201ENST00000420508 KRTAP10-4P60372 401 aaPredicted RBP7.22□□□□□ -1.25
AP000550.1-201ENST00000420508 PKD1L1Q8TDX9 2849 aa7.17□□□□□ -1.26
AP000550.1-201ENST00000420508 KRTAP12-1P59990 96 aa7.16□□□□□ -1.26
AP000550.1-201ENST00000420508 KRTAP12-2P59991 146 aa7.16□□□□□ -1.26
AP000550.1-201ENST00000420508 ALMS1Q8TCU4 4167 aa7.15□□□□□ -1.26
AP000550.1-201ENST00000420508 MEGF8Q7Z7M0 2845 aa7.15□□□□□ -1.27
AP000550.1-201ENST00000420508 KRTAP10-6P60371 365 aaPredicted RBP7.15□□□□□ -1.27
AP000550.1-201ENST00000420508 SVEP1Q4LDE5 3571 aa7.13□□□□□ -1.27
AP000550.1-201ENST00000420508 PRO2289Q9P1D8 64 aa7.13□□□□□ -1.27
AP000550.1-201ENST00000420508 MT1HL1P0DM35 61 aa7.13□□□□□ -1.27
AP000550.1-201ENST00000420508 TRRAPQ9Y4A5 3859 aa7.12□□□□□ -1.27
AP000550.1-201ENST00000420508 KRTAP10-10P60014 251 aa7.11□□□□□ -1.27
AP000550.1-201ENST00000420508 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
AP000550.1-201ENST00000420508 FBN3Q75N90 2809 aa7.07□□□□□ -1.28
AP000550.1-201ENST00000420508 KRTAP3-3Q9BYR6 98 aa6.98□□□□□ -1.29
AP000550.1-201ENST00000420508 DNAH9Q9NYC9 4486 aa6.97□□□□□ -1.29
AP000550.1-201ENST00000420508 CSMD2Q7Z408 3487 aa6.97□□□□□ -1.29
AP000550.1-201ENST00000420508 ZFHX3Q15911 3703 aa6.97□□□□□ -1.29
AP000550.1-201ENST00000420508 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.3
AP000550.1-201ENST00000420508 AKAP9Q99996 3911 aa6.95□□□□□ -1.3
AP000550.1-201ENST00000420508 CUBNO60494 3623 aa6.94□□□□□ -1.3
AP000550.1-201ENST00000420508 SRRM2Q9UQ35 2752 aaKnown RBP6.86□□□□□ -1.31
AP000550.1-201ENST00000420508 VPS13CQ709C8 3753 aa6.86□□□□□ -1.31
AP000550.1-201ENST00000420508 VPS13DQ5THJ4 4388 aa6.79□□□□□ -1.32
AP000550.1-201ENST00000420508 DNAH17Q9UFH2 4485 aa6.78□□□□□ -1.32
AP000550.1-201ENST00000420508 DNAH10Q8IVF4 4471 aa6.77□□□□□ -1.32
AP000550.1-201ENST00000420508 ZNF469Q96JG9 3925 aaPredicted RBP6.75□□□□□ -1.33
AP000550.1-201ENST00000420508 DNAH1Q9P2D7 4330 aa6.75□□□□□ -1.33
AP000550.1-201ENST00000420508 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
AP000550.1-201ENST00000420508 DNAH2Q9P225 4427 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms