RNA–Protein interactions for RNA: ENST00000419450.1

LINC01788-201, Transcript of long intergenic non-protein coding RNA 1788, humanhuman

TSL 1 (best) BASIC

Gene LINC01788, Length 2,086 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01788-201ENST00000419450 KRTAP13-3Q3SY46 172 aa4.58□□□□□ -1.68
LINC01788-201ENST00000419450 MYO18BQ8IUG5 2567 aa4.58□□□□□ -1.68
LINC01788-201ENST00000419450 IGF2RP11717 2491 aa4.56□□□□□ -1.68
LINC01788-201ENST00000419450 NUPR2A6NF83 97 aa4.56□□□□□ -1.68
LINC01788-201ENST00000419450 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
LINC01788-201ENST00000419450 KRTAP3-1Q9BYR8 98 aa4.56□□□□□ -1.68
LINC01788-201ENST00000419450 HIVEP2P31629 2446 aa4.55□□□□□ -1.68
LINC01788-201ENST00000419450 IGLV7-43P04211 117 aa4.54□□□□□ -1.68
LINC01788-201ENST00000419450 A0A096LNI7 61 aa4.53□□□□□ -1.68
LINC01788-201ENST00000419450 ANK3Q12955 4377 aaKnown RBP4.53□□□□□ -1.68
LINC01788-201ENST00000419450 F8P00451 2351 aa4.53□□□□□ -1.68
LINC01788-201ENST00000419450 Q5W150 140 aa4.53□□□□□ -1.68
LINC01788-201ENST00000419450 K7EIL1 84 aa4.52□□□□□ -1.69
LINC01788-201ENST00000419450 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
LINC01788-201ENST00000419450 SONP18583 2426 aaKnown RBP4.5□□□□□ -1.69
LINC01788-201ENST00000419450 SETD2Q9BYW2 2564 aaPredicted RBP4.5□□□□□ -1.69
LINC01788-201ENST00000419450 A0A087WTM6 91 aa4.5□□□□□ -1.69
LINC01788-201ENST00000419450 SPINT4Q6UDR6 99 aa4.5□□□□□ -1.69
LINC01788-201ENST00000419450 KRTAP10-3P60369 221 aa4.49□□□□□ -1.69
LINC01788-201ENST00000419450 ABCA12Q86UK0 2595 aa4.48□□□□□ -1.69
LINC01788-201ENST00000419450 KRTAP13-1Q8IUC0 172 aa4.48□□□□□ -1.69
LINC01788-201ENST00000419450 CENPEQ02224 2701 aa4.48□□□□□ -1.69
LINC01788-201ENST00000419450 POLQO75417 2590 aa4.48□□□□□ -1.69
LINC01788-201ENST00000419450 MTORP42345 2549 aa4.47□□□□□ -1.69
LINC01788-201ENST00000419450 HIVEP1P15822 2718 aa4.47□□□□□ -1.69
LINC01788-201ENST00000419450 IGKV2-30P06310 120 aa4.47□□□□□ -1.69
LINC01788-201ENST00000419450 LY6G6CO95867 125 aa4.46□□□□□ -1.7
LINC01788-201ENST00000419450 KRTAP11-1Q8IUC1 163 aa4.46□□□□□ -1.7
LINC01788-201ENST00000419450 KRTAP10-9P60411 292 aa4.45□□□□□ -1.7
LINC01788-201ENST00000419450 FLNCQ14315 2725 aa4.45□□□□□ -1.7
LINC01788-201ENST00000419450 J3QKU1 62 aa4.45□□□□□ -1.7
LINC01788-201ENST00000419450 LINC00304Q8N9R0 145 aa4.44□□□□□ -1.7
LINC01788-201ENST00000419450 PANO1I0J062 215 aa4.44□□□□□ -1.7
LINC01788-201ENST00000419450 ITPR3Q14573 2671 aa4.43□□□□□ -1.7
LINC01788-201ENST00000419450 UBR5O95071 2799 aaPredicted RBP4.43□□□□□ -1.7
LINC01788-201ENST00000419450 C14orf177Q52M58 125 aa4.43□□□□□ -1.7
LINC01788-201ENST00000419450 SRRM2Q9UQ35 2752 aaKnown RBP4.42□□□□□ -1.7
LINC01788-201ENST00000419450 DNAH1Q9P2D7 4330 aa4.41□□□□□ -1.7
LINC01788-201ENST00000419450 KRTAP1-1Q07627 177 aa4.41□□□□□ -1.7
LINC01788-201ENST00000419450 HELZ2Q9BYK8 2649 aaKnown RBP4.41□□□□□ -1.7
LINC01788-201ENST00000419450 IGKV2D-30A0A075B6S6 120 aa4.4□□□□□ -1.71
LINC01788-201ENST00000419450 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
LINC01788-201ENST00000419450 ZNF469Q96JG9 3925 aaPredicted RBP4.4□□□□□ -1.71
LINC01788-201ENST00000419450 IGSF10Q6WRI0 2623 aa4.4□□□□□ -1.71
LINC01788-201ENST00000419450 H0YAA0 97 aa4.39□□□□□ -1.71
LINC01788-201ENST00000419450 SPINK6Q6UWN8 80 aa4.39□□□□□ -1.71
LINC01788-201ENST00000419450 CCDC168Q8NDH2 2452 aa4.39□□□□□ -1.71
LINC01788-201ENST00000419450 PKD1L1Q8TDX9 2849 aa4.39□□□□□ -1.71
LINC01788-201ENST00000419450 VWFP04275 2813 aa4.38□□□□□ -1.71
LINC01788-201ENST00000419450 FLNAP21333 2647 aaKnown RBP4.38□□□□□ -1.71
LINC01788-201ENST00000419450 Q6ZSA8 131 aa4.37□□□□□ -1.71
LINC01788-201ENST00000419450 TENM4Q6N022 2769 aa4.37□□□□□ -1.71
LINC01788-201ENST00000419450 HECTD1Q9ULT8 2610 aa4.36□□□□□ -1.71
LINC01788-201ENST00000419450 NBDYA0A0U1RRE5 68 aa4.36□□□□□ -1.71
LINC01788-201ENST00000419450 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
LINC01788-201ENST00000419450 CSMD3Q7Z407 3707 aa4.36□□□□□ -1.71
LINC01788-201ENST00000419450 SSBP3-AS1Q7Z2R9 100 aa4.35□□□□□ -1.71
LINC01788-201ENST00000419450 ANAPC11Q9NYG5 84 aa4.34□□□□□ -1.71
LINC01788-201ENST00000419450 A0A1B0GU33 70 aa4.33□□□□□ -1.72
LINC01788-201ENST00000419450 CRIPTQ9P021 101 aa4.33□□□□□ -1.72
LINC01788-201ENST00000419450 TRRAPQ9Y4A5 3859 aa4.33□□□□□ -1.72
LINC01788-201ENST00000419450 PSORS1C2Q9UIG4 136 aa4.31□□□□□ -1.72
LINC01788-201ENST00000419450 SPINK1P00995 79 aa4.31□□□□□ -1.72
LINC01788-201ENST00000419450 H1FX-AS1Q4G0G2 97 aa4.31□□□□□ -1.72
LINC01788-201ENST00000419450 FBN1P35555 2871 aaKnown RBP4.31□□□□□ -1.72
LINC01788-201ENST00000419450 SPACA4Q8TDM5 124 aa4.29□□□□□ -1.72
LINC01788-201ENST00000419450 KRTAP1-5Q9BYS1 174 aa4.29□□□□□ -1.72
LINC01788-201ENST00000419450 KRTAP10-11P60412 298 aa4.27□□□□□ -1.73
LINC01788-201ENST00000419450 TENM3Q9P273 2699 aa4.27□□□□□ -1.73
LINC01788-201ENST00000419450 Q8N1X5 172 aa4.26□□□□□ -1.73
LINC01788-201ENST00000419450 NOTCH2Q04721 2471 aa4.26□□□□□ -1.73
LINC01788-201ENST00000419450 TYMSOSQ8TAI1 123 aa4.25□□□□□ -1.73
LINC01788-201ENST00000419450 ACANP16112 2415 aa4.24□□□□□ -1.73
LINC01788-201ENST00000419450 DNAH10Q8IVF4 4471 aa4.23□□□□□ -1.73
LINC01788-201ENST00000419450 LYSTQ99698 3801 aa4.23□□□□□ -1.73
LINC01788-201ENST00000419450 ANK2Q01484 3957 aa4.22□□□□□ -1.73
LINC01788-201ENST00000419450 UBE2DNLQ8IWF7 75 aa4.22□□□□□ -1.73
LINC01788-201ENST00000419450 MEGF8Q7Z7M0 2845 aa4.22□□□□□ -1.73
LINC01788-201ENST00000419450 TENM1Q9UKZ4 2725 aa4.21□□□□□ -1.73
LINC01788-201ENST00000419450 TPRXLQ17RH7 258 aa4.21□□□□□ -1.74
LINC01788-201ENST00000419450 NBEAL1Q6ZS30 2694 aa4.21□□□□□ -1.74
LINC01788-201ENST00000419450 COL7A1Q02388 2944 aa4.2□□□□□ -1.74
LINC01788-201ENST00000419450 PDZD2O15018 2839 aa4.19□□□□□ -1.74
LINC01788-201ENST00000419450 FLG2Q5D862 2391 aaPredicted RBP4.18□□□□□ -1.74
LINC01788-201ENST00000419450 SMR3AQ99954 134 aa4.18□□□□□ -1.74
LINC01788-201ENST00000419450 RPL37P61927 97 aaKnown RBP4.17□□□□□ -1.74
LINC01788-201ENST00000419450 COX6B2Q6YFQ2 88 aa4.17□□□□□ -1.74
LINC01788-201ENST00000419450 DNAH9Q9NYC9 4486 aa4.17□□□□□ -1.74
LINC01788-201ENST00000419450 DNAH8Q96JB1 4490 aa4.15□□□□□ -1.74
LINC01788-201ENST00000419450 FRAS1Q86XX4 4008 aa4.15□□□□□ -1.74
LINC01788-201ENST00000419450 ATRQ13535 2644 aa4.15□□□□□ -1.75
LINC01788-201ENST00000419450 Q6ZRN7 208 aaPredicted RBP4.15□□□□□ -1.75
LINC01788-201ENST00000419450 APLNQ9ULZ1 77 aa4.13□□□□□ -1.75
LINC01788-201ENST00000419450 KRTAP10-2P60368 255 aa4.12□□□□□ -1.75
LINC01788-201ENST00000419450 DNHD1Q96M86 4753 aa4.11□□□□□ -1.75
LINC01788-201ENST00000419450 TGP01266 2768 aa4.1□□□□□ -1.75
LINC01788-201ENST00000419450 DNAH3Q8TD57 4116 aa4.09□□□□□ -1.75
LINC01788-201ENST00000419450 ITPR2Q14571 2701 aa4.08□□□□□ -1.76
LINC01788-201ENST00000419450 KRTAP13-2Q52LG2 175 aa4.07□□□□□ -1.76
LINC01788-201ENST00000419450 NSD1Q96L73 2696 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms