RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 C9orf118A6NHY6 69 aa7.76□□□□□ -1.17
UBXN4-203ENST00000416538 TMEM256-PLSCR3K7ERE1 68 aa7.74□□□□□ -1.17
UBXN4-203ENST00000416538 KRTAP16-1A8MUX0 517 aa7.73□□□□□ -1.17
UBXN4-203ENST00000416538 ANKRD29Q8N6D5 301 aa7.73□□□□□ -1.17
UBXN4-203ENST00000416538 SIGMAR1Q99720 223 aa7.73□□□□□ -1.17
UBXN4-203ENST00000416538 SCGB1C2P0DMR2 95 aa7.72□□□□□ -1.17
UBXN4-203ENST00000416538 NOTCH2NLQ7Z3S9 236 aa7.71□□□□□ -1.18
UBXN4-203ENST00000416538 TRBV7-4A0A0J9YYF1 115 aa7.69□□□□□ -1.18
UBXN4-203ENST00000416538 TRACP01848 142 aa7.68□□□□□ -1.18
UBXN4-203ENST00000416538 UBE2V1Q13404 147 aa7.68□□□□□ -1.18
UBXN4-203ENST00000416538 IGKV4-1P06312 121 aa7.67□□□□□ -1.18
UBXN4-203ENST00000416538 DEFB116Q30KQ4 102 aa7.67□□□□□ -1.18
UBXN4-203ENST00000416538 LINC00472Q9H8W2 130 aa7.66□□□□□ -1.18
UBXN4-203ENST00000416538 CCKP06307 115 aa7.65□□□□□ -1.18
UBXN4-203ENST00000416538 KRTAP9-8Q9BYQ0 159 aa7.65□□□□□ -1.18
UBXN4-203ENST00000416538 M0R143 59 aa7.63□□□□□ -1.19
UBXN4-203ENST00000416538 LINC00313P59037 77 aa7.63□□□□□ -1.19
UBXN4-203ENST00000416538 RBM3P98179 157 aaKnown RBP7.62□□□□□ -1.19
UBXN4-203ENST00000416538 BAALC-AS2P0C853 105 aa7.6□□□□□ -1.19
UBXN4-203ENST00000416538 HRES1P13985 223 aa7.6□□□□□ -1.19
UBXN4-203ENST00000416538 DSCR8Q96T75 97 aa7.6□□□□□ -1.19
UBXN4-203ENST00000416538 VPS25Q9BRG1 176 aa7.6□□□□□ -1.19
UBXN4-203ENST00000416538 MPLKIPQ8TAP9 179 aa7.59□□□□□ -1.19
UBXN4-203ENST00000416538 IGHV6-1A0A0B4J1U7 121 aa7.58□□□□□ -1.2
UBXN4-203ENST00000416538 SMIM6P0DI80 62 aa7.58□□□□□ -1.2
UBXN4-203ENST00000416538 TRBV20-1A0A075B6N2 111 aa7.57□□□□□ -1.2
UBXN4-203ENST00000416538 C9JAW5 83 aa7.56□□□□□ -1.2
UBXN4-203ENST00000416538 ATXN8Q156A1 80 aa7.56□□□□□ -1.2
UBXN4-203ENST00000416538 NAA38Q9BRA0 125 aaKnown RBP7.55□□□□□ -1.2
UBXN4-203ENST00000416538 A0A1B0GVX0 72 aa7.54□□□□□ -1.2
UBXN4-203ENST00000416538 MT2AP02795 61 aa7.53□□□□□ -1.2
UBXN4-203ENST00000416538 JMJD7-PLA2G4BH0Y9G9 81 aa7.51□□□□□ -1.21
UBXN4-203ENST00000416538 FAM236DA0A1B0GTK5 79 aa7.5□□□□□ -1.21
UBXN4-203ENST00000416538 C8orf87E5RJ46 101 aa7.5□□□□□ -1.21
UBXN4-203ENST00000416538 TSTD3H0UI37 97 aa7.5□□□□□ -1.21
UBXN4-203ENST00000416538 FAM236CP0DP71 79 aa7.5□□□□□ -1.21
UBXN4-203ENST00000416538 J3KT08 172 aa7.49□□□□□ -1.21
UBXN4-203ENST00000416538 MT1FP04733 61 aa7.49□□□□□ -1.21
UBXN4-203ENST00000416538 LYRM7Q5U5X0 104 aa7.49□□□□□ -1.21
UBXN4-203ENST00000416538 USH2AO75445 5202 aa7.48□□□□□ -1.21
UBXN4-203ENST00000416538 Q6ZQT0 140 aa7.48□□□□□ -1.21
UBXN4-203ENST00000416538 BATFQ16520 125 aa7.47□□□□□ -1.21
UBXN4-203ENST00000416538 LOC110117498A0A087WWA1 95 aa7.46□□□□□ -1.22
UBXN4-203ENST00000416538 PDE6GP18545 87 aa7.46□□□□□ -1.22
UBXN4-203ENST00000416538 SSPOA2VEC9 5147 aa7.45□□□□□ -1.22
UBXN4-203ENST00000416538 A0A1B0GW54 56 aa7.45□□□□□ -1.22
UBXN4-203ENST00000416538 ZCCHC13Q8WW36 166 aaKnown RBP7.45□□□□□ -1.22
UBXN4-203ENST00000416538 NDUFB1O75438 58 aa7.44□□□□□ -1.22
UBXN4-203ENST00000416538 RBM12B-AS1Q9P1G2 102 aa7.44□□□□□ -1.22
UBXN4-203ENST00000416538 Q8N9P0 234 aaPredicted RBP7.42□□□□□ -1.22
UBXN4-203ENST00000416538 C14orf132Q9NPU4 83 aa7.42□□□□□ -1.22
UBXN4-203ENST00000416538 C8orf17Q9NRJ1 99 aa7.4□□□□□ -1.22
UBXN4-203ENST00000416538 IGKV3D-7A0A0C4DH55 119 aa7.39□□□□□ -1.23
UBXN4-203ENST00000416538 LOC105371267A0A1B0GV96 52 aa7.39□□□□□ -1.23
UBXN4-203ENST00000416538 SPINK7P58062 85 aa7.39□□□□□ -1.23
UBXN4-203ENST00000416538 A8MWP4 228 aa7.38□□□□□ -1.23
UBXN4-203ENST00000416538 NREPQ16612 68 aa7.36□□□□□ -1.23
UBXN4-203ENST00000416538 A0A1W2PPM0 123 aa7.35□□□□□ -1.23
UBXN4-203ENST00000416538 H3BT86 120 aa7.34□□□□□ -1.23
UBXN4-203ENST00000416538 TAX1BP3O14907 124 aa7.34□□□□□ -1.23
UBXN4-203ENST00000416538 KRTAP10-10P60014 251 aa7.34□□□□□ -1.23
UBXN4-203ENST00000416538 WFDC13Q8IUB5 93 aa7.33□□□□□ -1.24
UBXN4-203ENST00000416538 MMP24-AS1A0A0U1RRL7 71 aa7.31□□□□□ -1.24
UBXN4-203ENST00000416538 Q6ZVQ6 151 aa7.31□□□□□ -1.24
UBXN4-203ENST00000416538 PRR15Q8IV56 129 aa7.31□□□□□ -1.24
UBXN4-203ENST00000416538 MTURNQ8N3F0 131 aa7.3□□□□□ -1.24
UBXN4-203ENST00000416538 FCGBPQ9Y6R7 5405 aaPredicted RBP7.29□□□□□ -1.24
UBXN4-203ENST00000416538 K7EQZ3 153 aa7.26□□□□□ -1.25
UBXN4-203ENST00000416538 SPCS1Q9Y6A9 102 aa7.26□□□□□ -1.25
UBXN4-203ENST00000416538 TMEM254Q8TBM7 123 aa7.25□□□□□ -1.25
UBXN4-203ENST00000416538 KRTAP3-1Q9BYR8 98 aa7.25□□□□□ -1.25
UBXN4-203ENST00000416538 KRTAP5-3Q6L8H2 238 aa7.24□□□□□ -1.25
UBXN4-203ENST00000416538 MRPL34Q9BQ48 92 aaKnown RBP7.24□□□□□ -1.25
UBXN4-203ENST00000416538 KRTAP23-1A1A580 65 aa7.23□□□□□ -1.25
UBXN4-203ENST00000416538 BPY2O14599 106 aa7.22□□□□□ -1.25
UBXN4-203ENST00000416538 hDV103S1A0JD37 113 aa7.21□□□□□ -1.26
UBXN4-203ENST00000416538 COL5A1-AS1Q5SY13 56 aa7.2□□□□□ -1.26
UBXN4-203ENST00000416538 NDUFS5O43920 106 aa7.18□□□□□ -1.26
UBXN4-203ENST00000416538 Q5W150 140 aa7.18□□□□□ -1.26
UBXN4-203ENST00000416538 Q8N9L7 120 aa7.16□□□□□ -1.26
UBXN4-203ENST00000416538 K7EP34 96 aa7.13□□□□□ -1.27
UBXN4-203ENST00000416538 KRTAP19-6Q3LI70 58 aa7.13□□□□□ -1.27
UBXN4-203ENST00000416538 IGKV2D-30A0A075B6S6 120 aa7.12□□□□□ -1.27
UBXN4-203ENST00000416538 IGKV2-30P06310 120 aa7.12□□□□□ -1.27
UBXN4-203ENST00000416538 H1FX-AS1Q4G0G2 97 aa7.12□□□□□ -1.27
UBXN4-203ENST00000416538 PRO0461Q9UI25 63 aa7.12□□□□□ -1.27
UBXN4-203ENST00000416538 CASC2Q6XLA1 102 aa7.11□□□□□ -1.27
UBXN4-203ENST00000416538 UBL5Q9BZL1 73 aa7.1□□□□□ -1.27
UBXN4-203ENST00000416538 MACF1Q9UPN3 7388 aaKnown RBP7.1□□□□□ -1.27
UBXN4-203ENST00000416538 C7orf65Q6ZTY9 151 aa7.09□□□□□ -1.27
UBXN4-203ENST00000416538 LINC00846Q9NV44 126 aa7.08□□□□□ -1.28
UBXN4-203ENST00000416538 HCG22E2RYF7 251 aa7.06□□□□□ -1.28
UBXN4-203ENST00000416538 GTF2H5Q6ZYL4 71 aa7.06□□□□□ -1.28
UBXN4-203ENST00000416538 CXCL6P80162 114 aa7.03□□□□□ -1.28
UBXN4-203ENST00000416538 PCP4L1A6NKN8 68 aa7.02□□□□□ -1.29
UBXN4-203ENST00000416538 F8W1H4 67 aa7.02□□□□□ -1.29
UBXN4-203ENST00000416538 C4orf26Q17RF5 130 aa7.02□□□□□ -1.29
UBXN4-203ENST00000416538 SYNE2Q8WXH0 6885 aaKnown RBP7□□□□□ -1.29
UBXN4-203ENST00000416538 ETDBQ3ZM63 59 aa6.97□□□□□ -1.29
UBXN4-203ENST00000416538 C5orf47Q569G3 176 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms