RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 SSBP3-AS1Q7Z2R9 100 aa6.79□□□□□ -1.32
TRAFD1-202ENST00000412615 FRAS1Q86XX4 4008 aa6.79□□□□□ -1.32
TRAFD1-202ENST00000412615 DNAH6Q9C0G6 4158 aa6.77□□□□□ -1.32
TRAFD1-202ENST00000412615 MRPL34Q9BQ48 92 aaKnown RBP6.77□□□□□ -1.33
TRAFD1-202ENST00000412615 NDUFS5O43920 106 aa6.76□□□□□ -1.33
TRAFD1-202ENST00000412615 PRR26Q8N8Z3 221 aa6.76□□□□□ -1.33
TRAFD1-202ENST00000412615 Q6ZSA8 131 aa6.75□□□□□ -1.33
TRAFD1-202ENST00000412615 SPINK6Q6UWN8 80 aa6.74□□□□□ -1.33
TRAFD1-202ENST00000412615 KRTAP10-1P60331 282 aa6.73□□□□□ -1.33
TRAFD1-202ENST00000412615 BRK1Q8WUW1 75 aa6.73□□□□□ -1.33
TRAFD1-202ENST00000412615 A0A087X002 238 aa6.73□□□□□ -1.33
TRAFD1-202ENST00000412615 NOTCH2NLQ7Z3S9 236 aa6.73□□□□□ -1.33
TRAFD1-202ENST00000412615 Q1T7F1 81 aa6.72□□□□□ -1.33
TRAFD1-202ENST00000412615 DNAH5Q8TE73 4624 aa6.71□□□□□ -1.33
TRAFD1-202ENST00000412615 DNAH11Q96DT5 4516 aa6.71□□□□□ -1.33
TRAFD1-202ENST00000412615 IGLV7-46A0A075B6I9 117 aa6.71□□□□□ -1.34
TRAFD1-202ENST00000412615 ALMS1Q8TCU4 4167 aa6.69□□□□□ -1.34
TRAFD1-202ENST00000412615 C8orf87E5RJ46 101 aa6.69□□□□□ -1.34
TRAFD1-202ENST00000412615 KRTAP21-3Q3LHN1 58 aa6.69□□□□□ -1.34
TRAFD1-202ENST00000412615 PCOTHQ58A44 107 aa6.69□□□□□ -1.34
TRAFD1-202ENST00000412615 KRTAP13-2Q52LG2 175 aa6.67□□□□□ -1.34
TRAFD1-202ENST00000412615 LOC101927531A0A1B0GV80 90 aa6.64□□□□□ -1.35
TRAFD1-202ENST00000412615 PKD1P98161 4303 aa6.64□□□□□ -1.35
TRAFD1-202ENST00000412615 LINC00313P59037 77 aa6.63□□□□□ -1.35
TRAFD1-202ENST00000412615 RBM12B-AS1Q9P1G2 102 aa6.63□□□□□ -1.35
TRAFD1-202ENST00000412615 HYDINQ4G0P3 5121 aa6.63□□□□□ -1.35
TRAFD1-202ENST00000412615 KRTAP1-4P0C5Y4 121 aa6.63□□□□□ -1.35
TRAFD1-202ENST00000412615 COA5Q86WW8 74 aa6.63□□□□□ -1.35
TRAFD1-202ENST00000412615 FAT2Q9NYQ8 4349 aa6.62□□□□□ -1.35
TRAFD1-202ENST00000412615 Q5W150 140 aa6.62□□□□□ -1.35
TRAFD1-202ENST00000412615 LIMD2Q9BT23 127 aa6.62□□□□□ -1.35
TRAFD1-202ENST00000412615 LRP1BQ9NZR2 4599 aa6.62□□□□□ -1.35
TRAFD1-202ENST00000412615 PSPHP1O15172 72 aa6.61□□□□□ -1.35
TRAFD1-202ENST00000412615 KRTAP13-3Q3SY46 172 aa6.61□□□□□ -1.35
TRAFD1-202ENST00000412615 Q8N9P0 234 aaPredicted RBP6.6□□□□□ -1.35
TRAFD1-202ENST00000412615 PLA2G1BP04054 148 aaKnown RBP6.59□□□□□ -1.35
TRAFD1-202ENST00000412615 A8MUN3 132 aa6.57□□□□□ -1.36
TRAFD1-202ENST00000412615 FAM229AH3BQW9 127 aa6.57□□□□□ -1.36
TRAFD1-202ENST00000412615 TYMSOSQ8TAI1 123 aa6.56□□□□□ -1.36
TRAFD1-202ENST00000412615 A0A0A0MQY5 61 aa6.54□□□□□ -1.36
TRAFD1-202ENST00000412615 SPINK1P00995 79 aa6.54□□□□□ -1.36
TRAFD1-202ENST00000412615 HRES1P13985 223 aa6.54□□□□□ -1.36
TRAFD1-202ENST00000412615 VPS13BQ7Z7G8 4022 aa6.53□□□□□ -1.36
TRAFD1-202ENST00000412615 KRTAP16-1A8MUX0 517 aa6.53□□□□□ -1.36
TRAFD1-202ENST00000412615 Q5VV11 94 aa6.53□□□□□ -1.36
TRAFD1-202ENST00000412615 PRR15LQ9BU68 103 aa6.52□□□□□ -1.37
TRAFD1-202ENST00000412615 RETNLBQ9BQ08 111 aa6.49□□□□□ -1.37
TRAFD1-202ENST00000412615 J3QL48 77 aa6.49□□□□□ -1.37
TRAFD1-202ENST00000412615 IGKV2-30P06310 120 aa6.49□□□□□ -1.37
TRAFD1-202ENST00000412615 ACYP2P14621 99 aa6.49□□□□□ -1.37
TRAFD1-202ENST00000412615 CHKB-CPT1BH3BT56 60 aa6.48□□□□□ -1.37
TRAFD1-202ENST00000412615 SPAG11AQ6PDA7 123 aa6.48□□□□□ -1.37
TRAFD1-202ENST00000412615 RPS29P62273 56 aaKnown RBP6.47□□□□□ -1.37
TRAFD1-202ENST00000412615 LINC00304Q8N9R0 145 aa6.47□□□□□ -1.37
TRAFD1-202ENST00000412615 LINC01558Q9Y6Z2 57 aa6.47□□□□□ -1.37
TRAFD1-202ENST00000412615 Q75L30 129 aa6.46□□□□□ -1.37
TRAFD1-202ENST00000412615 KTN1-AS1Q86SY8 53 aa6.45□□□□□ -1.38
TRAFD1-202ENST00000412615 DMAC1Q96GE9 116 aa6.45□□□□□ -1.38
TRAFD1-202ENST00000412615 SACSQ9NZJ4 4579 aa6.45□□□□□ -1.38
TRAFD1-202ENST00000412615 SMR3BP02814 79 aaPredicted RBP6.44□□□□□ -1.38
TRAFD1-202ENST00000412615 A0A1B0GVY2 172 aa6.43□□□□□ -1.38
TRAFD1-202ENST00000412615 PKHD1P08F94 4074 aa6.41□□□□□ -1.38
TRAFD1-202ENST00000412615 IGKV2D-30A0A075B6S6 120 aa6.4□□□□□ -1.38
TRAFD1-202ENST00000412615 A6NED7 52 aa6.4□□□□□ -1.38
TRAFD1-202ENST00000412615 DYNC1H1Q14204 4646 aaKnown RBP6.38□□□□□ -1.39
TRAFD1-202ENST00000412615 KRTAP10-4P60372 401 aaPredicted RBP6.36□□□□□ -1.39
TRAFD1-202ENST00000412615 KRTAP3-3Q9BYR6 98 aa6.36□□□□□ -1.39
TRAFD1-202ENST00000412615 KRTAP3-2Q9BYR7 98 aa6.36□□□□□ -1.39
TRAFD1-202ENST00000412615 A8MU10 97 aa6.35□□□□□ -1.39
TRAFD1-202ENST00000412615 LCA10Q71F78 164 aa6.34□□□□□ -1.39
TRAFD1-202ENST00000412615 LCE2DQ5TA82 110 aaPredicted RBP6.34□□□□□ -1.39
TRAFD1-202ENST00000412615 C7orf65Q6ZTY9 151 aa6.33□□□□□ -1.4
TRAFD1-202ENST00000412615 CDC42SE1Q9NRR8 79 aa6.33□□□□□ -1.4
TRAFD1-202ENST00000412615 ATP11AUNQ6ZP68 121 aa6.31□□□□□ -1.4
TRAFD1-202ENST00000412615 APOBP04114 4563 aaKnown RBP6.3□□□□□ -1.4
TRAFD1-202ENST00000412615 SPINK7P58062 85 aa6.3□□□□□ -1.4
TRAFD1-202ENST00000412615 C20orf166-AS1Q96NR2 134 aa6.29□□□□□ -1.4
TRAFD1-202ENST00000412615 C9orf92A6NGG3 77 aa6.28□□□□□ -1.4
TRAFD1-202ENST00000412615 A8MUU9 505 aa6.28□□□□□ -1.4
TRAFD1-202ENST00000412615 SPTSSBQ8NFR3 76 aa6.28□□□□□ -1.4
TRAFD1-202ENST00000412615 FAT1Q14517 4588 aa6.28□□□□□ -1.4
TRAFD1-202ENST00000412615 A0A1B0GU69 56 aa6.27□□□□□ -1.41
TRAFD1-202ENST00000412615 PKHD1L1Q86WI1 4243 aa6.26□□□□□ -1.41
TRAFD1-202ENST00000412615 RYR2Q92736 4967 aa6.26□□□□□ -1.41
TRAFD1-202ENST00000412615 Q8N1X5 172 aa6.22□□□□□ -1.41
TRAFD1-202ENST00000412615 A6NN06 94 aa6.16□□□□□ -1.42
TRAFD1-202ENST00000412615 KMT2CQ8NEZ4 4911 aaKnown RBP6.16□□□□□ -1.42
TRAFD1-202ENST00000412615 UQCR11O14957 56 aa6.15□□□□□ -1.42
TRAFD1-202ENST00000412615 KRTAP10-8P60410 259 aa6.15□□□□□ -1.42
TRAFD1-202ENST00000412615 Q5VSD8 79 aa6.14□□□□□ -1.43
TRAFD1-202ENST00000412615 SPATA8Q6RVD6 105 aa6.14□□□□□ -1.43
TRAFD1-202ENST00000412615 LINC01554Q52M75 96 aa6.13□□□□□ -1.43
TRAFD1-202ENST00000412615 FLG2Q5D862 2391 aaPredicted RBP6.13□□□□□ -1.43
TRAFD1-202ENST00000412615 MIR22HGQ0VDD5 57 aa6.12□□□□□ -1.43
TRAFD1-202ENST00000412615 KRTAP3-1Q9BYR8 98 aa6.11□□□□□ -1.43
TRAFD1-202ENST00000412615 COX6B2Q6YFQ2 88 aa6.07□□□□□ -1.44
TRAFD1-202ENST00000412615 FAT3Q8TDW7 4589 aa6.06□□□□□ -1.44
TRAFD1-202ENST00000412615 TNXBP22105 4242 aa6.06□□□□□ -1.44
TRAFD1-202ENST00000412615 HSPG2P98160 4391 aa6.05□□□□□ -1.44
TRAFD1-202ENST00000412615 LRP1Q07954 4544 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms