RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 A8MWP4 228 aa6.7□□□□□ -1.34
SNRNP35-202ENST00000412157 PKHD1L1Q86WI1 4243 aa6.7□□□□□ -1.34
SNRNP35-202ENST00000412157 UBR4Q5T4S7 5183 aa6.67□□□□□ -1.34
SNRNP35-202ENST00000412157 ATOX1O00244 68 aa6.67□□□□□ -1.34
SNRNP35-202ENST00000412157 PRR15Q8IV56 129 aa6.67□□□□□ -1.34
SNRNP35-202ENST00000412157 KRTAP29-1A8MX34 341 aaPredicted RBP6.65□□□□□ -1.34
SNRNP35-202ENST00000412157 HCG22E2RYF7 251 aa6.65□□□□□ -1.34
SNRNP35-202ENST00000412157 A0A1B0GVX0 72 aa6.64□□□□□ -1.35
SNRNP35-202ENST00000412157 C1orf195Q5TG92 126 aa6.64□□□□□ -1.35
SNRNP35-202ENST00000412157 ANAPC13Q9BS18 74 aa6.64□□□□□ -1.35
SNRNP35-202ENST00000412157 HMCN2Q8NDA2 5059 aa6.63□□□□□ -1.35
SNRNP35-202ENST00000412157 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
SNRNP35-202ENST00000412157 IGHV6-1A0A0B4J1U7 121 aa6.62□□□□□ -1.35
SNRNP35-202ENST00000412157 WFDC13Q8IUB5 93 aa6.62□□□□□ -1.35
SNRNP35-202ENST00000412157 C8orf17Q9NRJ1 99 aa6.61□□□□□ -1.35
SNRNP35-202ENST00000412157 MMP24-AS1A0A0U1RRL7 71 aa6.6□□□□□ -1.35
SNRNP35-202ENST00000412157 C8orf87E5RJ46 101 aa6.6□□□□□ -1.35
SNRNP35-202ENST00000412157 OXTP01178 125 aa6.6□□□□□ -1.35
SNRNP35-202ENST00000412157 PCP4P48539 62 aa6.6□□□□□ -1.35
SNRNP35-202ENST00000412157 CASC2Q6XLA1 102 aa6.6□□□□□ -1.35
SNRNP35-202ENST00000412157 SMIM20Q8N5G0 67 aa6.6□□□□□ -1.35
SNRNP35-202ENST00000412157 hDV103S1A0JD37 113 aa6.57□□□□□ -1.36
SNRNP35-202ENST00000412157 LRP1Q07954 4544 aaKnown RBP6.57□□□□□ -1.36
SNRNP35-202ENST00000412157 TRAV7A0A075B6U4 112 aa6.55□□□□□ -1.36
SNRNP35-202ENST00000412157 LCE2BO14633 110 aa6.55□□□□□ -1.36
SNRNP35-202ENST00000412157 SERP2Q8N6R1 65 aa6.55□□□□□ -1.36
SNRNP35-202ENST00000412157 TMEM254Q8TBM7 123 aa6.55□□□□□ -1.36
SNRNP35-202ENST00000412157 FAT3Q8TDW7 4589 aa6.55□□□□□ -1.36
SNRNP35-202ENST00000412157 MT1HL1P0DM35 61 aa6.54□□□□□ -1.36
SNRNP35-202ENST00000412157 LINC00313P59037 77 aa6.54□□□□□ -1.36
SNRNP35-202ENST00000412157 MRPL34Q9BQ48 92 aaKnown RBP6.53□□□□□ -1.36
SNRNP35-202ENST00000412157 COX7CP15954 63 aa6.52□□□□□ -1.37
SNRNP35-202ENST00000412157 RETNLBQ9BQ08 111 aa6.52□□□□□ -1.37
SNRNP35-202ENST00000412157 NOTCH2NLQ7Z3S9 236 aa6.51□□□□□ -1.37
SNRNP35-202ENST00000412157 OCR1Q9BZK8 76 aa6.51□□□□□ -1.37
SNRNP35-202ENST00000412157 UQCRQO14949 82 aa6.5□□□□□ -1.37
SNRNP35-202ENST00000412157 NDUFS5O43920 106 aa6.5□□□□□ -1.37
SNRNP35-202ENST00000412157 FP248Q71RG6 208 aaPredicted RBP6.48□□□□□ -1.37
SNRNP35-202ENST00000412157 TP53AIP1Q9HCN2 124 aa6.47□□□□□ -1.37
SNRNP35-202ENST00000412157 CCDC179H3BU77 68 aa6.46□□□□□ -1.38
SNRNP35-202ENST00000412157 KRTAP16-1A8MUX0 517 aa6.44□□□□□ -1.38
SNRNP35-202ENST00000412157 C9orf92A6NGG3 77 aa6.43□□□□□ -1.38
SNRNP35-202ENST00000412157 MP68P56378 58 aa6.43□□□□□ -1.38
SNRNP35-202ENST00000412157 C5orf47Q569G3 176 aa6.43□□□□□ -1.38
SNRNP35-202ENST00000412157 C20orf197Q8N268 126 aa6.43□□□□□ -1.38
SNRNP35-202ENST00000412157 TNXBP22105 4242 aa6.42□□□□□ -1.38
SNRNP35-202ENST00000412157 IGLV7-46A0A075B6I9 117 aa6.42□□□□□ -1.38
SNRNP35-202ENST00000412157 TRAV22A0A0B4J277 110 aa6.42□□□□□ -1.38
SNRNP35-202ENST00000412157 Q8N9P0 234 aaPredicted RBP6.42□□□□□ -1.38
SNRNP35-202ENST00000412157 H0Y9P7 68 aa6.41□□□□□ -1.38
SNRNP35-202ENST00000412157 PRR4Q16378 134 aa6.4□□□□□ -1.38
SNRNP35-202ENST00000412157 RNF213Q63HN8 5207 aa6.4□□□□□ -1.39
SNRNP35-202ENST00000412157 H3BPC8 53 aa6.38□□□□□ -1.39
SNRNP35-202ENST00000412157 LRP2P98164 4655 aa6.37□□□□□ -1.39
SNRNP35-202ENST00000412157 A0A0U1RQV1 116 aa6.37□□□□□ -1.39
SNRNP35-202ENST00000412157 KLKP1Q107X0 134 aa6.37□□□□□ -1.39
SNRNP35-202ENST00000412157 SNURFQ9Y675 71 aa6.37□□□□□ -1.39
SNRNP35-202ENST00000412157 LINC00208Q96KT6 92 aa6.36□□□□□ -1.39
SNRNP35-202ENST00000412157 C20orf166-AS1Q96NR2 134 aa6.35□□□□□ -1.39
SNRNP35-202ENST00000412157 A8MUU9 505 aa6.34□□□□□ -1.39
SNRNP35-202ENST00000412157 NDUFC1O43677 76 aa6.33□□□□□ -1.4
SNRNP35-202ENST00000412157 KRTAP13-3Q3SY46 172 aa6.33□□□□□ -1.4
SNRNP35-202ENST00000412157 C1orf64Q8NEQ6 169 aa6.33□□□□□ -1.4
SNRNP35-202ENST00000412157 Q5W150 140 aa6.31□□□□□ -1.4
SNRNP35-202ENST00000412157 Q75L30 129 aa6.31□□□□□ -1.4
SNRNP35-202ENST00000412157 ZCCHC13Q8WW36 166 aaKnown RBP6.31□□□□□ -1.4
SNRNP35-202ENST00000412157 LOC101927531A0A1B0GV80 90 aa6.3□□□□□ -1.4
SNRNP35-202ENST00000412157 TPRXLQ17RH7 258 aa6.3□□□□□ -1.4
SNRNP35-202ENST00000412157 CYSTM1Q9H1C7 97 aa6.3□□□□□ -1.4
SNRNP35-202ENST00000412157 XP32Q5T750 250 aa6.28□□□□□ -1.4
SNRNP35-202ENST00000412157 H7BZZ5 65 aa6.27□□□□□ -1.41
SNRNP35-202ENST00000412157 TMEM258P61165 79 aa6.26□□□□□ -1.41
SNRNP35-202ENST00000412157 RPL37P61927 97 aaKnown RBP6.26□□□□□ -1.41
SNRNP35-202ENST00000412157 IGKV2-30P06310 120 aa6.25□□□□□ -1.41
SNRNP35-202ENST00000412157 ATP11AUNQ6ZP68 121 aa6.24□□□□□ -1.41
SNRNP35-202ENST00000412157 IGKV2D-30A0A075B6S6 120 aa6.23□□□□□ -1.41
SNRNP35-202ENST00000412157 PCOTHQ58A44 107 aa6.23□□□□□ -1.41
SNRNP35-202ENST00000412157 C7orf65Q6ZTY9 151 aa6.22□□□□□ -1.41
SNRNP35-202ENST00000412157 CYP4F30PQ9H0H9 118 aa6.22□□□□□ -1.41
SNRNP35-202ENST00000412157 FAM236DA0A1B0GTK5 79 aa6.21□□□□□ -1.42
SNRNP35-202ENST00000412157 FAM236CP0DP71 79 aa6.21□□□□□ -1.42
SNRNP35-202ENST00000412157 ATP5EP56381 51 aaPredicted RBP6.21□□□□□ -1.42
SNRNP35-202ENST00000412157 SPANXA2-OT1Q8N9U9 137 aa6.17□□□□□ -1.42
SNRNP35-202ENST00000412157 LPAP08519 4548 aa6.15□□□□□ -1.43
SNRNP35-202ENST00000412157 HRES1P13985 223 aa6.14□□□□□ -1.43
SNRNP35-202ENST00000412157 SPINK7P58062 85 aa6.14□□□□□ -1.43
SNRNP35-202ENST00000412157 LCE2CQ5TA81 110 aa6.14□□□□□ -1.43
SNRNP35-202ENST00000412157 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
SNRNP35-202ENST00000412157 SEC61BP60468 96 aaKnown RBP6.12□□□□□ -1.43
SNRNP35-202ENST00000412157 KRTAP9-2Q9BYQ4 174 aa6.1□□□□□ -1.43
SNRNP35-202ENST00000412157 SERP1Q9Y6X1 66 aa6.07□□□□□ -1.44
SNRNP35-202ENST00000412157 MUC2Q02817 5179 aa6.04□□□□□ -1.44
SNRNP35-202ENST00000412157 C4orf26Q17RF5 130 aa6.04□□□□□ -1.44
SNRNP35-202ENST00000412157 DMAC1Q96GE9 116 aa6.04□□□□□ -1.44
SNRNP35-202ENST00000412157 ACYP2P14621 99 aa6.03□□□□□ -1.44
SNRNP35-202ENST00000412157 A8MUN3 132 aa6.01□□□□□ -1.45
SNRNP35-202ENST00000412157 KRTAP9-6A0A140TA67 174 aa6□□□□□ -1.45
SNRNP35-202ENST00000412157 RPS28P62857 69 aaKnown RBP6□□□□□ -1.45
SNRNP35-202ENST00000412157 COX6B2Q6YFQ2 88 aa5.99□□□□□ -1.45
SNRNP35-202ENST00000412157 COA5Q86WW8 74 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms