RNA–Protein interactions for RNA: ENST00000411857.2

HNRNPA1P54-201, Transcript of heterogeneous nuclear ribonucleoprotein A1 pseudogene 54, humanhuman

BASIC

Gene HNRNPA1P54, Length 9,714 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1P54-201ENST00000411857 CHD7Q9P2D1 2997 aa4.2□□□□□ -1.74
HNRNPA1P54-201ENST00000411857 SZT2Q5T011 3432 aa4.2□□□□□ -1.74
HNRNPA1P54-201ENST00000411857 UNC80Q8N2C7 3258 aa4.18□□□□□ -1.74
HNRNPA1P54-201ENST00000411857 DMXL2Q8TDJ6 3036 aa4.18□□□□□ -1.74
HNRNPA1P54-201ENST00000411857 MYO15AQ9UKN7 3530 aa4.18□□□□□ -1.74
HNRNPA1P54-201ENST00000411857 WDFY3Q8IZQ1 3526 aa4.17□□□□□ -1.74
HNRNPA1P54-201ENST00000411857 XP32Q5T750 250 aa4.16□□□□□ -1.74
HNRNPA1P54-201ENST00000411857 HTTP42858 3142 aa4.16□□□□□ -1.74
HNRNPA1P54-201ENST00000411857 P0C880 135 aa4.14□□□□□ -1.75
HNRNPA1P54-201ENST00000411857 TPRXLQ17RH7 258 aa4.14□□□□□ -1.75
HNRNPA1P54-201ENST00000411857 FRYLO94915 3013 aa4.13□□□□□ -1.75
HNRNPA1P54-201ENST00000411857 A0A1B0GVY2 172 aa4.12□□□□□ -1.75
HNRNPA1P54-201ENST00000411857 KRTAP10-10P60014 251 aa4.11□□□□□ -1.75
HNRNPA1P54-201ENST00000411857 LAMA1P25391 3075 aa4.11□□□□□ -1.75
HNRNPA1P54-201ENST00000411857 ASH1LQ9NR48 2969 aaKnown RBP4.11□□□□□ -1.75
HNRNPA1P54-201ENST00000411857 VCANP13611 3396 aa4.1□□□□□ -1.75
HNRNPA1P54-201ENST00000411857 H0YAA0 97 aa4.09□□□□□ -1.75
HNRNPA1P54-201ENST00000411857 TACC2O95359 2948 aa4.09□□□□□ -1.76
HNRNPA1P54-201ENST00000411857 KALRNO60229 2985 aa4.08□□□□□ -1.76
HNRNPA1P54-201ENST00000411857 COL6A3P12111 3177 aa4.08□□□□□ -1.76
HNRNPA1P54-201ENST00000411857 CHD9Q3L8U1 2897 aa4.07□□□□□ -1.76
HNRNPA1P54-201ENST00000411857 SPTBN5Q9NRC6 3674 aaKnown RBP4.06□□□□□ -1.76
HNRNPA1P54-201ENST00000411857 HIVEP1P15822 2718 aa4.05□□□□□ -1.76
HNRNPA1P54-201ENST00000411857 ITPR1Q14643 2758 aa4.04□□□□□ -1.76
HNRNPA1P54-201ENST00000411857 KRTAP1-4P0C5Y4 121 aa4.04□□□□□ -1.76
HNRNPA1P54-201ENST00000411857 COL12A1Q99715 3063 aa4.04□□□□□ -1.76
HNRNPA1P54-201ENST00000411857 SPEGQ15772 3267 aa4.03□□□□□ -1.76
HNRNPA1P54-201ENST00000411857 CFAP47Q6ZTR5 3102 aa4.03□□□□□ -1.76
HNRNPA1P54-201ENST00000411857 BOD1L1Q8NFC6 3051 aa4.03□□□□□ -1.76
HNRNPA1P54-201ENST00000411857 CELSR2Q9HCU4 2923 aa4.01□□□□□ -1.77
HNRNPA1P54-201ENST00000411857 TENM1Q9UKZ4 2725 aa4.01□□□□□ -1.77
HNRNPA1P54-201ENST00000411857 DCHS1Q96JQ0 3298 aa4.01□□□□□ -1.77
HNRNPA1P54-201ENST00000411857 LRBAP50851 2863 aa4.01□□□□□ -1.77
HNRNPA1P54-201ENST00000411857 ZZEF1O43149 2961 aa3.99□□□□□ -1.77
HNRNPA1P54-201ENST00000411857 KRTAP13-3Q3SY46 172 aa3.99□□□□□ -1.77
HNRNPA1P54-201ENST00000411857 NF1P21359 2839 aa3.97□□□□□ -1.77
HNRNPA1P54-201ENST00000411857 TENM4Q6N022 2769 aa3.97□□□□□ -1.77
HNRNPA1P54-201ENST00000411857 ASPMQ8IZT6 3477 aa3.96□□□□□ -1.78
HNRNPA1P54-201ENST00000411857 LAMA5O15230 3695 aa3.96□□□□□ -1.78
HNRNPA1P54-201ENST00000411857 TNRC18O15417 2968 aaPredicted RBP3.93□□□□□ -1.78
HNRNPA1P54-201ENST00000411857 EYSQ5T1H1 3165 aa3.92□□□□□ -1.78
HNRNPA1P54-201ENST00000411857 DMDP11532 3685 aa3.92□□□□□ -1.78
HNRNPA1P54-201ENST00000411857 NIPBLQ6KC79 2804 aaeCLIP3.92□□□□□ -1.78
HNRNPA1P54-201ENST00000411857 ATMQ13315 3056 aa3.92□□□□□ -1.78
HNRNPA1P54-201ENST00000411857 ADGRG4Q8IZF6 3080 aa3.92□□□□□ -1.78
HNRNPA1P54-201ENST00000411857 TENM3Q9P273 2699 aa3.91□□□□□ -1.78
HNRNPA1P54-201ENST00000411857 PKD1L1Q8TDX9 2849 aa3.89□□□□□ -1.79
HNRNPA1P54-201ENST00000411857 KRTAP13-4Q3LI77 160 aa3.89□□□□□ -1.79
HNRNPA1P54-201ENST00000411857 NBEAQ8NFP9 2946 aa3.89□□□□□ -1.79
HNRNPA1P54-201ENST00000411857 RELNP78509 3460 aa3.88□□□□□ -1.79
HNRNPA1P54-201ENST00000411857 DCHS2Q6V1P9 2916 aa3.88□□□□□ -1.79
HNRNPA1P54-201ENST00000411857 TGP01266 2768 aa3.87□□□□□ -1.79
HNRNPA1P54-201ENST00000411857 KRTAP12-2P59991 146 aa3.86□□□□□ -1.79
HNRNPA1P54-201ENST00000411857 ZFHX3Q15911 3703 aa3.85□□□□□ -1.79
HNRNPA1P54-201ENST00000411857 VWFP04275 2813 aa3.85□□□□□ -1.79
HNRNPA1P54-201ENST00000411857 CSMD1Q96PZ7 3565 aa3.84□□□□□ -1.79
HNRNPA1P54-201ENST00000411857 SPENQ96T58 3664 aaKnown RBP3.83□□□□□ -1.8
HNRNPA1P54-201ENST00000411857 ZFHX4Q86UP3 3567 aa3.81□□□□□ -1.8
HNRNPA1P54-201ENST00000411857 CELSR1Q9NYQ6 3014 aa3.8□□□□□ -1.8
HNRNPA1P54-201ENST00000411857 KRTAP15-1Q3LI76 137 aa3.8□□□□□ -1.8
HNRNPA1P54-201ENST00000411857 PDZD2O15018 2839 aa3.8□□□□□ -1.8
HNRNPA1P54-201ENST00000411857 DMXL1Q9Y485 3027 aa3.78□□□□□ -1.8
HNRNPA1P54-201ENST00000411857 ZANQ9Y493 2812 aa3.78□□□□□ -1.8
HNRNPA1P54-201ENST00000411857 FBN2P35556 2912 aa3.76□□□□□ -1.81
HNRNPA1P54-201ENST00000411857 KRTAP12-1P59990 96 aa3.75□□□□□ -1.81
HNRNPA1P54-201ENST00000411857 SRRM2Q9UQ35 2752 aaKnown RBP3.75□□□□□ -1.81
HNRNPA1P54-201ENST00000411857 SMG1Q96Q15 3661 aaKnown RBP3.75□□□□□ -1.81
HNRNPA1P54-201ENST00000411857 LOC400499M0QZD8 3231 aa3.74□□□□□ -1.81
HNRNPA1P54-201ENST00000411857 HRNRQ86YZ3 2850 aaPredicted RBP3.73□□□□□ -1.81
HNRNPA1P54-201ENST00000411857 INE1O15225 51 aa3.72□□□□□ -1.81
HNRNPA1P54-201ENST00000411857 TENM2Q9NT68 2774 aa3.69□□□□□ -1.82
HNRNPA1P54-201ENST00000411857 NBPF19A0A087WUL8 3843 aa3.66□□□□□ -1.82
HNRNPA1P54-201ENST00000411857 VPS13CQ709C8 3753 aa3.66□□□□□ -1.82
HNRNPA1P54-201ENST00000411857 SVEP1Q4LDE5 3571 aa3.66□□□□□ -1.82
HNRNPA1P54-201ENST00000411857 BSNQ9UPA5 3926 aa3.61□□□□□ -1.83
HNRNPA1P54-201ENST00000411857 MXRA5Q9NR99 2828 aa3.61□□□□□ -1.83
HNRNPA1P54-201ENST00000411857 MUC3AQ02505 3323 aa3.6□□□□□ -1.83
HNRNPA1P54-201ENST00000411857 KRTAP10-12P60413 245 aa3.59□□□□□ -1.83
HNRNPA1P54-201ENST00000411857 CSMD2Q7Z408 3487 aa3.59□□□□□ -1.84
HNRNPA1P54-201ENST00000411857 KRTAP3-1Q9BYR8 98 aa3.56□□□□□ -1.84
HNRNPA1P54-201ENST00000411857 COL7A1Q02388 2944 aa3.55□□□□□ -1.84
HNRNPA1P54-201ENST00000411857 CUBNO60494 3623 aa3.55□□□□□ -1.84
HNRNPA1P54-201ENST00000411857 AKAP9Q99996 3911 aa3.54□□□□□ -1.84
HNRNPA1P54-201ENST00000411857 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
HNRNPA1P54-201ENST00000411857 KRTAP10-6P60371 365 aaPredicted RBP3.52□□□□□ -1.85
HNRNPA1P54-201ENST00000411857 MEGF8Q7Z7M0 2845 aa3.5□□□□□ -1.85
HNRNPA1P54-201ENST00000411857 FBN1P35555 2871 aaKnown RBP3.48□□□□□ -1.85
HNRNPA1P54-201ENST00000411857 ALMS1Q8TCU4 4167 aa3.48□□□□□ -1.85
HNRNPA1P54-201ENST00000411857 KRTAP23-1A1A580 65 aa3.47□□□□□ -1.85
HNRNPA1P54-201ENST00000411857 KRTAP12-3P60328 96 aa3.44□□□□□ -1.86
HNRNPA1P54-201ENST00000411857 FBN3Q75N90 2809 aa3.38□□□□□ -1.87
HNRNPA1P54-201ENST00000411857 MT1HL1P0DM35 61 aa3.36□□□□□ -1.87
HNRNPA1P54-201ENST00000411857 KRTAP3-2Q9BYR7 98 aa3.36□□□□□ -1.87
HNRNPA1P54-201ENST00000411857 KRTAP3-3Q9BYR6 98 aa3.35□□□□□ -1.87
HNRNPA1P54-201ENST00000411857 LCE3AQ5TA76 89 aa3.34□□□□□ -1.87
HNRNPA1P54-201ENST00000411857 KRTAP8-1Q8IUC2 63 aa3.32□□□□□ -1.88
HNRNPA1P54-201ENST00000411857 KRTAP10-5P60370 271 aa3.29□□□□□ -1.88
HNRNPA1P54-201ENST00000411857 TRRAPQ9Y4A5 3859 aa3.29□□□□□ -1.88
HNRNPA1P54-201ENST00000411857 HUWE1Q7Z6Z7 4374 aaKnown RBP3.26□□□□□ -1.89
HNRNPA1P54-201ENST00000411857 ZNF469Q96JG9 3925 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms