RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 A8MWP4 228 aa11.27□□□□□ -0.61
C4orf48-202ENST00000409860 ACYP1P07311 99 aa11.27□□□□□ -0.61
C4orf48-202ENST00000409860 FAM240AA0A1B0GVK7 77 aa11.26□□□□□ -0.61
C4orf48-202ENST00000409860 DSCR10P59022 87 aa11.25□□□□□ -0.61
C4orf48-202ENST00000409860 LINC00313P59037 77 aa11.24□□□□□ -0.61
C4orf48-202ENST00000409860 C8orf87E5RJ46 101 aa11.23□□□□□ -0.61
C4orf48-202ENST00000409860 IGKV3D-7A0A0C4DH55 119 aa11.21□□□□□ -0.61
C4orf48-202ENST00000409860 J3QR89 54 aa11.2□□□□□ -0.62
C4orf48-202ENST00000409860 PRR15Q8IV56 129 aa11.19□□□□□ -0.62
C4orf48-202ENST00000409860 NOTCH2NLQ7Z3S9 236 aa11.17□□□□□ -0.62
C4orf48-202ENST00000409860 UBR4Q5T4S7 5183 aa11.16□□□□□ -0.62
C4orf48-202ENST00000409860 K7EQZ3 153 aa11.15□□□□□ -0.62
C4orf48-202ENST00000409860 SEC61BP60468 96 aaKnown RBP11.15□□□□□ -0.62
C4orf48-202ENST00000409860 RPL37P61927 97 aaKnown RBP11.14□□□□□ -0.63
C4orf48-202ENST00000409860 C8orf17Q9NRJ1 99 aa11.14□□□□□ -0.63
C4orf48-202ENST00000409860 Q75L30 129 aa11.12□□□□□ -0.63
C4orf48-202ENST00000409860 KRTAP16-1A8MUX0 517 aa11.11□□□□□ -0.63
C4orf48-202ENST00000409860 CXCL6P80162 114 aa11.11□□□□□ -0.63
C4orf48-202ENST00000409860 C20orf166-AS1Q96NR2 134 aa11.11□□□□□ -0.63
C4orf48-202ENST00000409860 Q8N9L7 120 aa11.1□□□□□ -0.63
C4orf48-202ENST00000409860 MUC17Q685J3 4493 aa11.09□□□□□ -0.63
C4orf48-202ENST00000409860 A8MUU9 505 aa11.08□□□□□ -0.64
C4orf48-202ENST00000409860 ATP5EP2Q5VTU8 51 aa11.07□□□□□ -0.64
C4orf48-202ENST00000409860 MMP24-AS1A0A0U1RRL7 71 aa11.06□□□□□ -0.64
C4orf48-202ENST00000409860 PCOTHQ58A44 107 aa11.04□□□□□ -0.64
C4orf48-202ENST00000409860 ATP11AUNQ6ZP68 121 aa11.03□□□□□ -0.64
C4orf48-202ENST00000409860 LINC00643Q86TS7 51 aa11.03□□□□□ -0.64
C4orf48-202ENST00000409860 hDV103S1A0JD37 113 aa11.02□□□□□ -0.65
C4orf48-202ENST00000409860 K7ERU9 68 aa11.02□□□□□ -0.65
C4orf48-202ENST00000409860 TMEM254Q8TBM7 123 aa11.02□□□□□ -0.65
C4orf48-202ENST00000409860 MRPL34Q9BQ48 92 aaKnown RBP10.99□□□□□ -0.65
C4orf48-202ENST00000409860 WFDC13Q8IUB5 93 aa10.98□□□□□ -0.65
C4orf48-202ENST00000409860 Q8N9P0 234 aaPredicted RBP10.98□□□□□ -0.65
C4orf48-202ENST00000409860 RNF213Q63HN8 5207 aa10.97□□□□□ -0.65
C4orf48-202ENST00000409860 HCG22E2RYF7 251 aa10.97□□□□□ -0.65
C4orf48-202ENST00000409860 CASC2Q6XLA1 102 aa10.97□□□□□ -0.65
C4orf48-202ENST00000409860 HIST1H4AP62805 103 aaKnown RBP10.91□□□□□ -0.66
C4orf48-202ENST00000409860 NDUFS5O43920 106 aa10.9□□□□□ -0.66
C4orf48-202ENST00000409860 ZCCHC13Q8WW36 166 aaKnown RBP10.87□□□□□ -0.67
C4orf48-202ENST00000409860 KRTAP4-1Q9BYQ7 146 aa10.86□□□□□ -0.67
C4orf48-202ENST00000409860 A0A087WVE0 104 aa10.78□□□□□ -0.68
C4orf48-202ENST00000409860 MUC2Q02817 5179 aa10.77□□□□□ -0.69
C4orf48-202ENST00000409860 A0A0U1RQV1 116 aa10.73□□□□□ -0.69
C4orf48-202ENST00000409860 TP53AIP1Q9HCN2 124 aa10.73□□□□□ -0.69
C4orf48-202ENST00000409860 MT-ATP8P03928 68 aa10.72□□□□□ -0.69
C4orf48-202ENST00000409860 IMUPQ9GZP8 106 aa10.7□□□□□ -0.7
C4orf48-202ENST00000409860 Q5W150 140 aa10.68□□□□□ -0.7
C4orf48-202ENST00000409860 SPINK7P58062 85 aa10.65□□□□□ -0.7
C4orf48-202ENST00000409860 UQCRQO14949 82 aa10.59□□□□□ -0.71
C4orf48-202ENST00000409860 IGKV2D-30A0A075B6S6 120 aa10.58□□□□□ -0.72
C4orf48-202ENST00000409860 IGKV2-30P06310 120 aa10.58□□□□□ -0.72
C4orf48-202ENST00000409860 SCGB1A1P11684 91 aa10.58□□□□□ -0.72
C4orf48-202ENST00000409860 C7orf65Q6ZTY9 151 aa10.58□□□□□ -0.72
C4orf48-202ENST00000409860 TRAV22A0A0B4J277 110 aa10.56□□□□□ -0.72
C4orf48-202ENST00000409860 HRES1P13985 223 aa10.56□□□□□ -0.72
C4orf48-202ENST00000409860 FAT4Q6V0I7 4981 aa10.54□□□□□ -0.72
C4orf48-202ENST00000409860 COX6B2Q6YFQ2 88 aa10.54□□□□□ -0.72
C4orf48-202ENST00000409860 KRTAP19-2Q3LHN2 52 aa10.52□□□□□ -0.73
C4orf48-202ENST00000409860 OCR1Q9BZK8 76 aa10.52□□□□□ -0.73
C4orf48-202ENST00000409860 RBM12B-AS1Q9P1G2 102 aa10.52□□□□□ -0.73
C4orf48-202ENST00000409860 FAM236AA0A1B0GUQ0 79 aa10.51□□□□□ -0.73
C4orf48-202ENST00000409860 FAM236BA0A1B0GV22 79 aa10.51□□□□□ -0.73
C4orf48-202ENST00000409860 MPLKIPQ8TAP9 179 aa10.49□□□□□ -0.73
C4orf48-202ENST00000409860 H0Y9P7 68 aa10.48□□□□□ -0.73
C4orf48-202ENST00000409860 ATOX1O00244 68 aa10.48□□□□□ -0.73
C4orf48-202ENST00000409860 FAM236DA0A1B0GTK5 79 aa10.47□□□□□ -0.73
C4orf48-202ENST00000409860 FAM236CP0DP71 79 aa10.47□□□□□ -0.73
C4orf48-202ENST00000409860 LCE2CQ5TA81 110 aa10.46□□□□□ -0.73
C4orf48-202ENST00000409860 LOC101927531A0A1B0GV80 90 aa10.45□□□□□ -0.74
C4orf48-202ENST00000409860 MP68P56378 58 aa10.43□□□□□ -0.74
C4orf48-202ENST00000409860 SMIM20Q8N5G0 67 aa10.42□□□□□ -0.74
C4orf48-202ENST00000409860 C5orf47Q569G3 176 aa10.41□□□□□ -0.74
C4orf48-202ENST00000409860 CYP4F30PQ9H0H9 118 aa10.39□□□□□ -0.75
C4orf48-202ENST00000409860 C1orf64Q8NEQ6 169 aa10.37□□□□□ -0.75
C4orf48-202ENST00000409860 LINC00208Q96KT6 92 aa10.36□□□□□ -0.75
C4orf48-202ENST00000409860 TRAV7A0A075B6U4 112 aa10.35□□□□□ -0.75
C4orf48-202ENST00000409860 H3BPC8 53 aa10.34□□□□□ -0.75
C4orf48-202ENST00000409860 MT1HP80294 61 aa10.32□□□□□ -0.76
C4orf48-202ENST00000409860 LCE2AQ5TA79 106 aaPredicted RBP10.32□□□□□ -0.76
C4orf48-202ENST00000409860 C4orf26Q17RF5 130 aa10.31□□□□□ -0.76
C4orf48-202ENST00000409860 FLGP20930 4061 aaPredicted RBP10.27□□□□□ -0.77
C4orf48-202ENST00000409860 M0R2T5 61 aa10.23□□□□□ -0.77
C4orf48-202ENST00000409860 H1FX-AS1Q4G0G2 97 aa10.22□□□□□ -0.77
C4orf48-202ENST00000409860 SERP2Q8N6R1 65 aa10.22□□□□□ -0.77
C4orf48-202ENST00000409860 KLKP1Q107X0 134 aa10.19□□□□□ -0.78
C4orf48-202ENST00000409860 KRTAP3-1Q9BYR8 98 aa10.14□□□□□ -0.79
C4orf48-202ENST00000409860 C20orf197Q8N268 126 aa10.09□□□□□ -0.79
C4orf48-202ENST00000409860 SNURFQ9Y675 71 aa10.08□□□□□ -0.8
C4orf48-202ENST00000409860 COX7CP15954 63 aa10.06□□□□□ -0.8
C4orf48-202ENST00000409860 A8MUN3 132 aa10.05□□□□□ -0.8
C4orf48-202ENST00000409860 KRTAP10-6P60371 365 aaPredicted RBP10.04□□□□□ -0.8
C4orf48-202ENST00000409860 ANAPC13Q9BS18 74 aa10.03□□□□□ -0.8
C4orf48-202ENST00000409860 S4R3F8 94 aa10.03□□□□□ -0.8
C4orf48-202ENST00000409860 LORP23490 312 aaPredicted RBP9.99□□□□□ -0.81
C4orf48-202ENST00000409860 DMAC1Q96GE9 116 aa9.94□□□□□ -0.82
C4orf48-202ENST00000409860 LCA10Q71F78 164 aa9.93□□□□□ -0.82
C4orf48-202ENST00000409860 CSAG1Q6PB30 78 aa9.87□□□□□ -0.83
C4orf48-202ENST00000409860 SPANXA2-OT1Q8N9U9 137 aa9.87□□□□□ -0.83
C4orf48-202ENST00000409860 NDUFC1O43677 76 aa9.86□□□□□ -0.83
C4orf48-202ENST00000409860 KRTAP9-8Q9BYQ0 159 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms