RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 SCGB1A1P11684 91 aa9.41□□□□□ -0.9
SSB-202ENST00000409333 PRR15Q8IV56 129 aa9.39□□□□□ -0.91
SSB-202ENST00000409333 IGHV6-1A0A0B4J1U7 121 aa9.38□□□□□ -0.91
SSB-202ENST00000409333 A0A1B0GVX0 72 aa9.38□□□□□ -0.91
SSB-202ENST00000409333 NDUFB1O75438 58 aa9.38□□□□□ -0.91
SSB-202ENST00000409333 HIST1H4AP62805 103 aaKnown RBP9.38□□□□□ -0.91
SSB-202ENST00000409333 FP248Q71RG6 208 aaPredicted RBP9.36□□□□□ -0.91
SSB-202ENST00000409333 A0A087WVE0 104 aa9.35□□□□□ -0.91
SSB-202ENST00000409333 NOTCH2NLQ7Z3S9 236 aa9.35□□□□□ -0.91
SSB-202ENST00000409333 PRR4Q16378 134 aa9.34□□□□□ -0.91
SSB-202ENST00000409333 HERC1Q15751 4861 aa9.34□□□□□ -0.91
SSB-202ENST00000409333 IGLV7-46A0A075B6I9 117 aa9.32□□□□□ -0.92
SSB-202ENST00000409333 C8orf17Q9NRJ1 99 aa9.31□□□□□ -0.92
SSB-202ENST00000409333 MMP24-AS1A0A0U1RRL7 71 aa9.3□□□□□ -0.92
SSB-202ENST00000409333 C9orf92A6NGG3 77 aa9.29□□□□□ -0.92
SSB-202ENST00000409333 IMUPQ9GZP8 106 aa9.29□□□□□ -0.92
SSB-202ENST00000409333 LPAP08519 4548 aa9.29□□□□□ -0.92
SSB-202ENST00000409333 LINC00313P59037 77 aa9.28□□□□□ -0.92
SSB-202ENST00000409333 C8orf87E5RJ46 101 aa9.27□□□□□ -0.92
SSB-202ENST00000409333 WFDC13Q8IUB5 93 aa9.27□□□□□ -0.92
SSB-202ENST00000409333 HCG22E2RYF7 251 aa9.27□□□□□ -0.93
SSB-202ENST00000409333 KRTAP13-3Q3SY46 172 aa9.24□□□□□ -0.93
SSB-202ENST00000409333 CASC2Q6XLA1 102 aa9.24□□□□□ -0.93
SSB-202ENST00000409333 hDV103S1A0JD37 113 aa9.23□□□□□ -0.93
SSB-202ENST00000409333 KRTAP16-1A8MUX0 517 aa9.22□□□□□ -0.93
SSB-202ENST00000409333 TPRXLQ17RH7 258 aa9.19□□□□□ -0.94
SSB-202ENST00000409333 TMEM254Q8TBM7 123 aa9.19□□□□□ -0.94
SSB-202ENST00000409333 FAM236AA0A1B0GUQ0 79 aa9.19□□□□□ -0.94
SSB-202ENST00000409333 FAM236BA0A1B0GV22 79 aa9.19□□□□□ -0.94
SSB-202ENST00000409333 MRPL34Q9BQ48 92 aaKnown RBP9.18□□□□□ -0.94
SSB-202ENST00000409333 HMCN2Q8NDA2 5059 aa9.18□□□□□ -0.94
SSB-202ENST00000409333 LRP2P98164 4655 aa9.14□□□□□ -0.95
SSB-202ENST00000409333 XP32Q5T750 250 aa9.14□□□□□ -0.95
SSB-202ENST00000409333 Q8N9P0 234 aaPredicted RBP9.12□□□□□ -0.95
SSB-202ENST00000409333 NDUFS5O43920 106 aa9.12□□□□□ -0.95
SSB-202ENST00000409333 C20orf166-AS1Q96NR2 134 aa9.11□□□□□ -0.95
SSB-202ENST00000409333 A8MUU9 505 aa9.09□□□□□ -0.95
SSB-202ENST00000409333 Q75L30 129 aa9.07□□□□□ -0.96
SSB-202ENST00000409333 OCR1Q9BZK8 76 aa9.05□□□□□ -0.96
SSB-202ENST00000409333 ATOX1O00244 68 aa9.04□□□□□ -0.96
SSB-202ENST00000409333 RPL37P61927 97 aaKnown RBP9.04□□□□□ -0.96
SSB-202ENST00000409333 TP53AIP1Q9HCN2 124 aa9□□□□□ -0.97
SSB-202ENST00000409333 Q5W150 140 aa8.99□□□□□ -0.97
SSB-202ENST00000409333 MUC17Q685J3 4493 aa8.98□□□□□ -0.97
SSB-202ENST00000409333 ZCCHC13Q8WW36 166 aaKnown RBP8.97□□□□□ -0.97
SSB-202ENST00000409333 TRAV7A0A075B6U4 112 aa8.96□□□□□ -0.98
SSB-202ENST00000409333 UQCRQO14949 82 aa8.96□□□□□ -0.98
SSB-202ENST00000409333 SMIM20Q8N5G0 67 aa8.96□□□□□ -0.98
SSB-202ENST00000409333 SVIPQ8NHG7 77 aa8.96□□□□□ -0.98
SSB-202ENST00000409333 ATP11AUNQ6ZP68 121 aa8.94□□□□□ -0.98
SSB-202ENST00000409333 ANAPC13Q9BS18 74 aa8.94□□□□□ -0.98
SSB-202ENST00000409333 TRAV22A0A0B4J277 110 aa8.92□□□□□ -0.98
SSB-202ENST00000409333 PCOTHQ58A44 107 aa8.91□□□□□ -0.98
SSB-202ENST00000409333 SERP2Q8N6R1 65 aa8.91□□□□□ -0.98
SSB-202ENST00000409333 H0Y9P7 68 aa8.9□□□□□ -0.98
SSB-202ENST00000409333 C5orf47Q569G3 176 aa8.87□□□□□ -0.99
SSB-202ENST00000409333 SEC61BP60468 96 aaKnown RBP8.86□□□□□ -0.99
SSB-202ENST00000409333 LCE2DQ5TA82 110 aaPredicted RBP8.86□□□□□ -0.99
SSB-202ENST00000409333 COX7CP15954 63 aa8.84□□□□□ -0.99
SSB-202ENST00000409333 MP68P56378 58 aa8.84□□□□□ -0.99
SSB-202ENST00000409333 LINC00208Q96KT6 92 aa8.83□□□□□ -1
SSB-202ENST00000409333 IGKV2D-30A0A075B6S6 120 aa8.81□□□□□ -1
SSB-202ENST00000409333 IGKV2-30P06310 120 aa8.81□□□□□ -1
SSB-202ENST00000409333 C1orf64Q8NEQ6 169 aa8.81□□□□□ -1
SSB-202ENST00000409333 UBR4Q5T4S7 5183 aa8.8□□□□□ -1
SSB-202ENST00000409333 C20orf197Q8N268 126 aa8.79□□□□□ -1
SSB-202ENST00000409333 A0A0U1RQV1 116 aa8.77□□□□□ -1.01
SSB-202ENST00000409333 LOC101927531A0A1B0GV80 90 aa8.77□□□□□ -1.01
SSB-202ENST00000409333 SPINK7P58062 85 aa8.77□□□□□ -1.01
SSB-202ENST00000409333 SNURFQ9Y675 71 aa8.77□□□□□ -1.01
SSB-202ENST00000409333 H3BPC8 53 aa8.76□□□□□ -1.01
SSB-202ENST00000409333 KRTAP4-1Q9BYQ7 146 aa8.76□□□□□ -1.01
SSB-202ENST00000409333 C7orf65Q6ZTY9 151 aa8.76□□□□□ -1.01
SSB-202ENST00000409333 CCDC179H3BU77 68 aa8.75□□□□□ -1.01
SSB-202ENST00000409333 CYP4F30PQ9H0H9 118 aa8.75□□□□□ -1.01
SSB-202ENST00000409333 MUC2Q02817 5179 aa8.73□□□□□ -1.01
SSB-202ENST00000409333 KLKP1Q107X0 134 aa8.71□□□□□ -1.02
SSB-202ENST00000409333 CYSTM1Q9H1C7 97 aa8.69□□□□□ -1.02
SSB-202ENST00000409333 RNF213Q63HN8 5207 aa8.69□□□□□ -1.02
SSB-202ENST00000409333 HRES1P13985 223 aa8.65□□□□□ -1.02
SSB-202ENST00000409333 C4orf26Q17RF5 130 aa8.59□□□□□ -1.03
SSB-202ENST00000409333 H7BZZ5 65 aa8.58□□□□□ -1.04
SSB-202ENST00000409333 MPLKIPQ8TAP9 179 aa8.56□□□□□ -1.04
SSB-202ENST00000409333 NDUFC1O43677 76 aa8.56□□□□□ -1.04
SSB-202ENST00000409333 RBM12B-AS1Q9P1G2 102 aa8.5□□□□□ -1.05
SSB-202ENST00000409333 COX6B2Q6YFQ2 88 aa8.5□□□□□ -1.05
SSB-202ENST00000409333 KRTAP3-1Q9BYR8 98 aa8.48□□□□□ -1.05
SSB-202ENST00000409333 RPS28P62857 69 aaKnown RBP8.47□□□□□ -1.05
SSB-202ENST00000409333 KRTAP19-2Q3LHN2 52 aa8.47□□□□□ -1.05
SSB-202ENST00000409333 SPANXA2-OT1Q8N9U9 137 aa8.47□□□□□ -1.05
SSB-202ENST00000409333 FAM236DA0A1B0GTK5 79 aa8.45□□□□□ -1.06
SSB-202ENST00000409333 FAM236CP0DP71 79 aa8.45□□□□□ -1.06
SSB-202ENST00000409333 TMEM258P61165 79 aa8.44□□□□□ -1.06
SSB-202ENST00000409333 DMAC1Q96GE9 116 aa8.43□□□□□ -1.06
SSB-202ENST00000409333 FAT4Q6V0I7 4981 aa8.39□□□□□ -1.07
SSB-202ENST00000409333 A8MUN3 132 aa8.38□□□□□ -1.07
SSB-202ENST00000409333 LCE2CQ5TA81 110 aa8.37□□□□□ -1.07
SSB-202ENST00000409333 FLGP20930 4061 aaPredicted RBP8.37□□□□□ -1.07
SSB-202ENST00000409333 H1FX-AS1Q4G0G2 97 aa8.36□□□□□ -1.07
SSB-202ENST00000409333 ATP5EP56381 51 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms