RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 CELSR2Q9HCU4 2923 aa7.42□□□□□ -1.22
AFF3-202ENST00000409236 COL12A1Q99715 3063 aa7.41□□□□□ -1.22
AFF3-202ENST00000409236 WDFY4Q6ZS81 3184 aa7.38□□□□□ -1.23
AFF3-202ENST00000409236 VPS13AQ96RL7 3174 aa7.37□□□□□ -1.23
AFF3-202ENST00000409236 TACC2O95359 2948 aa7.37□□□□□ -1.23
AFF3-202ENST00000409236 CRYBG3Q68DQ2 2970 aa7.36□□□□□ -1.23
AFF3-202ENST00000409236 TNRC18O15417 2968 aaPredicted RBP7.31□□□□□ -1.24
AFF3-202ENST00000409236 PRUNE2Q8WUY3 3088 aa7.3□□□□□ -1.24
AFF3-202ENST00000409236 FREM2Q5SZK8 3169 aa7.28□□□□□ -1.24
AFF3-202ENST00000409236 KRTAP7-1Q8IUC3 87 aa7.26□□□□□ -1.25
AFF3-202ENST00000409236 DMXL2Q8TDJ6 3036 aa7.25□□□□□ -1.25
AFF3-202ENST00000409236 XP32Q5T750 250 aa7.22□□□□□ -1.25
AFF3-202ENST00000409236 INE1O15225 51 aa7.21□□□□□ -1.26
AFF3-202ENST00000409236 NBEAQ8NFP9 2946 aa7.18□□□□□ -1.26
AFF3-202ENST00000409236 TPRXLQ17RH7 258 aa7.17□□□□□ -1.26
AFF3-202ENST00000409236 DCHS2Q6V1P9 2916 aa7.17□□□□□ -1.26
AFF3-202ENST00000409236 KRTAP13-4Q3LI77 160 aa7.14□□□□□ -1.27
AFF3-202ENST00000409236 ZZEF1O43149 2961 aa7.14□□□□□ -1.27
AFF3-202ENST00000409236 LAMA1P25391 3075 aa7.13□□□□□ -1.27
AFF3-202ENST00000409236 KRTAP10-10P60014 251 aa7.13□□□□□ -1.27
AFF3-202ENST00000409236 REV3LO60673 3130 aa7.12□□□□□ -1.27
AFF3-202ENST00000409236 RANBP2P49792 3224 aaKnown RBP7.12□□□□□ -1.27
AFF3-202ENST00000409236 KRTAP12-2P59991 146 aa7.11□□□□□ -1.27
AFF3-202ENST00000409236 VWFP04275 2813 aa7.11□□□□□ -1.27
AFF3-202ENST00000409236 XIRP2A4UGR9 3374 aa7.07□□□□□ -1.28
AFF3-202ENST00000409236 TENM2Q9NT68 2774 aa7.05□□□□□ -1.28
AFF3-202ENST00000409236 CELSR1Q9NYQ6 3014 aa7.05□□□□□ -1.28
AFF3-202ENST00000409236 A0A1B0GVY2 172 aa7.04□□□□□ -1.28
AFF3-202ENST00000409236 MKI67P46013 3256 aaKnown RBP7.04□□□□□ -1.28
AFF3-202ENST00000409236 ZANQ9Y493 2812 aa7.03□□□□□ -1.28
AFF3-202ENST00000409236 TENM4Q6N022 2769 aa7.01□□□□□ -1.29
AFF3-202ENST00000409236 BOD1L1Q8NFC6 3051 aa6.98□□□□□ -1.29
AFF3-202ENST00000409236 USP34Q70CQ2 3546 aa6.97□□□□□ -1.29
AFF3-202ENST00000409236 MXRA5Q9NR99 2828 aa6.97□□□□□ -1.29
AFF3-202ENST00000409236 FBN2P35556 2912 aa6.96□□□□□ -1.3
AFF3-202ENST00000409236 CELSR3Q9NYQ7 3312 aa6.96□□□□□ -1.3
AFF3-202ENST00000409236 PKD1L1Q8TDX9 2849 aa6.95□□□□□ -1.3
AFF3-202ENST00000409236 KRTAP1-4P0C5Y4 121 aa6.94□□□□□ -1.3
AFF3-202ENST00000409236 ATMQ13315 3056 aa6.92□□□□□ -1.3
AFF3-202ENST00000409236 DMXL1Q9Y485 3027 aa6.91□□□□□ -1.3
AFF3-202ENST00000409236 KRTAP15-1Q3LI76 137 aa6.9□□□□□ -1.3
AFF3-202ENST00000409236 ZFHX3Q15911 3703 aa6.89□□□□□ -1.31
AFF3-202ENST00000409236 UNC80Q8N2C7 3258 aa6.89□□□□□ -1.31
AFF3-202ENST00000409236 ADGRG4Q8IZF6 3080 aa6.88□□□□□ -1.31
AFF3-202ENST00000409236 KRTAP13-3Q3SY46 172 aa6.87□□□□□ -1.31
AFF3-202ENST00000409236 COL6A3P12111 3177 aa6.85□□□□□ -1.31
AFF3-202ENST00000409236 COL7A1Q02388 2944 aa6.85□□□□□ -1.31
AFF3-202ENST00000409236 HTTP42858 3142 aa6.84□□□□□ -1.31
AFF3-202ENST00000409236 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
AFF3-202ENST00000409236 BRCA2P51587 3418 aa6.82□□□□□ -1.32
AFF3-202ENST00000409236 HRNRQ86YZ3 2850 aaPredicted RBP6.81□□□□□ -1.32
AFF3-202ENST00000409236 DNAH14Q0VDD8 3507 aa6.8□□□□□ -1.32
AFF3-202ENST00000409236 LAMA3Q16787 3333 aa6.79□□□□□ -1.32
AFF3-202ENST00000409236 MEGF8Q7Z7M0 2845 aa6.68□□□□□ -1.34
AFF3-202ENST00000409236 CDH23Q9H251 3354 aa6.65□□□□□ -1.35
AFF3-202ENST00000409236 KRTAP21-3Q3LHN1 58 aa6.63□□□□□ -1.35
AFF3-202ENST00000409236 SPTBN5Q9NRC6 3674 aaKnown RBP6.6□□□□□ -1.35
AFF3-202ENST00000409236 CFAP47Q6ZTR5 3102 aa6.56□□□□□ -1.36
AFF3-202ENST00000409236 SZT2Q5T011 3432 aa6.55□□□□□ -1.36
AFF3-202ENST00000409236 VCANP13611 3396 aa6.55□□□□□ -1.36
AFF3-202ENST00000409236 ZFHX4Q86UP3 3567 aa6.48□□□□□ -1.37
AFF3-202ENST00000409236 SPEGQ15772 3267 aa6.46□□□□□ -1.37
AFF3-202ENST00000409236 NBPF19A0A087WUL8 3843 aa6.44□□□□□ -1.38
AFF3-202ENST00000409236 OTOGQ6ZRI0 2925 aa6.43□□□□□ -1.38
AFF3-202ENST00000409236 KRTAP10-12P60413 245 aa6.42□□□□□ -1.38
AFF3-202ENST00000409236 FBN3Q75N90 2809 aa6.42□□□□□ -1.38
AFF3-202ENST00000409236 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
AFF3-202ENST00000409236 KRTAP10-6P60371 365 aaPredicted RBP6.34□□□□□ -1.39
AFF3-202ENST00000409236 KRTAP3-1Q9BYR8 98 aa6.29□□□□□ -1.4
AFF3-202ENST00000409236 SPENQ96T58 3664 aaKnown RBP6.25□□□□□ -1.41
AFF3-202ENST00000409236 MYO15AQ9UKN7 3530 aa6.25□□□□□ -1.41
AFF3-202ENST00000409236 WDFY3Q8IZQ1 3526 aa6.24□□□□□ -1.41
AFF3-202ENST00000409236 SMG1Q96Q15 3661 aaKnown RBP6.23□□□□□ -1.41
AFF3-202ENST00000409236 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.41
AFF3-202ENST00000409236 KRTAP12-3P60328 96 aa6.21□□□□□ -1.41
AFF3-202ENST00000409236 FBN1P35555 2871 aaKnown RBP6.21□□□□□ -1.42
AFF3-202ENST00000409236 DMDP11532 3685 aa6.18□□□□□ -1.42
AFF3-202ENST00000409236 EYSQ5T1H1 3165 aa6.16□□□□□ -1.42
AFF3-202ENST00000409236 AKAP9Q99996 3911 aa6.15□□□□□ -1.43
AFF3-202ENST00000409236 LAMA5O15230 3695 aa6.13□□□□□ -1.43
AFF3-202ENST00000409236 ASPMQ8IZT6 3477 aa6.06□□□□□ -1.44
AFF3-202ENST00000409236 LOC400499M0QZD8 3231 aa6.05□□□□□ -1.44
AFF3-202ENST00000409236 KRTAP10-5P60370 271 aa6.02□□□□□ -1.45
AFF3-202ENST00000409236 DCHS1Q96JQ0 3298 aa6.02□□□□□ -1.45
AFF3-202ENST00000409236 ALMS1Q8TCU4 4167 aa6.01□□□□□ -1.45
AFF3-202ENST00000409236 VPS13CQ709C8 3753 aa6.01□□□□□ -1.45
AFF3-202ENST00000409236 RELNP78509 3460 aa6□□□□□ -1.45
AFF3-202ENST00000409236 KRTAP3-2Q9BYR7 98 aa5.99□□□□□ -1.45
AFF3-202ENST00000409236 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
AFF3-202ENST00000409236 TRRAPQ9Y4A5 3859 aa5.93□□□□□ -1.46
AFF3-202ENST00000409236 KRTAP3-3Q9BYR6 98 aa5.92□□□□□ -1.46
AFF3-202ENST00000409236 CSMD1Q96PZ7 3565 aa5.91□□□□□ -1.46
AFF3-202ENST00000409236 CSMD3Q7Z407 3707 aa5.73□□□□□ -1.49
AFF3-202ENST00000409236 CMYA5Q8N3K9 4069 aa5.72□□□□□ -1.49
AFF3-202ENST00000409236 BSNQ9UPA5 3926 aa5.71□□□□□ -1.49
AFF3-202ENST00000409236 KRTAP8-1Q8IUC2 63 aa5.71□□□□□ -1.5
AFF3-202ENST00000409236 DNAH3Q8TD57 4116 aa5.64□□□□□ -1.51
AFF3-202ENST00000409236 LYSTQ99698 3801 aa5.64□□□□□ -1.51
AFF3-202ENST00000409236 CUBNO60494 3623 aa5.63□□□□□ -1.51
AFF3-202ENST00000409236 SVEP1Q4LDE5 3571 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms