RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 DMXL2Q8TDJ6 3036 aa6.74□□□□□ -1.33
SHANK2-203ENST00000409161 NBEAQ8NFP9 2946 aa6.73□□□□□ -1.33
SHANK2-203ENST00000409161 CRYBG3Q68DQ2 2970 aa6.7□□□□□ -1.34
SHANK2-203ENST00000409161 MKI67P46013 3256 aaKnown RBP6.69□□□□□ -1.34
SHANK2-203ENST00000409161 ZZEF1O43149 2961 aa6.69□□□□□ -1.34
SHANK2-203ENST00000409161 XIRP2A4UGR9 3374 aa6.68□□□□□ -1.34
SHANK2-203ENST00000409161 RANBP2P49792 3224 aaKnown RBP6.67□□□□□ -1.34
SHANK2-203ENST00000409161 PDZD2O15018 2839 aa6.67□□□□□ -1.34
SHANK2-203ENST00000409161 KRTAP13-2Q52LG2 175 aa6.66□□□□□ -1.34
SHANK2-203ENST00000409161 TNRC18O15417 2968 aaPredicted RBP6.65□□□□□ -1.35
SHANK2-203ENST00000409161 REV3LO60673 3130 aa6.65□□□□□ -1.35
SHANK2-203ENST00000409161 P0C880 135 aa6.65□□□□□ -1.35
SHANK2-203ENST00000409161 DCHS2Q6V1P9 2916 aa6.61□□□□□ -1.35
SHANK2-203ENST00000409161 CELSR3Q9NYQ7 3312 aa6.59□□□□□ -1.35
SHANK2-203ENST00000409161 LAMA1P25391 3075 aa6.59□□□□□ -1.35
SHANK2-203ENST00000409161 KRTAP7-1Q8IUC3 87 aa6.58□□□□□ -1.36
SHANK2-203ENST00000409161 H0YAA0 97 aa6.57□□□□□ -1.36
SHANK2-203ENST00000409161 ZANQ9Y493 2812 aa6.56□□□□□ -1.36
SHANK2-203ENST00000409161 UNC80Q8N2C7 3258 aa6.55□□□□□ -1.36
SHANK2-203ENST00000409161 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
SHANK2-203ENST00000409161 USP34Q70CQ2 3546 aa6.53□□□□□ -1.36
SHANK2-203ENST00000409161 BOD1L1Q8NFC6 3051 aa6.53□□□□□ -1.36
SHANK2-203ENST00000409161 HTTP42858 3142 aa6.49□□□□□ -1.37
SHANK2-203ENST00000409161 KRTAP10-8P60410 259 aa6.49□□□□□ -1.37
SHANK2-203ENST00000409161 LAMA3Q16787 3333 aa6.48□□□□□ -1.37
SHANK2-203ENST00000409161 TENM4Q6N022 2769 aa6.48□□□□□ -1.37
SHANK2-203ENST00000409161 COL6A3P12111 3177 aa6.47□□□□□ -1.37
SHANK2-203ENST00000409161 FBN2P35556 2912 aa6.47□□□□□ -1.37
SHANK2-203ENST00000409161 ADGRG4Q8IZF6 3080 aa6.45□□□□□ -1.38
SHANK2-203ENST00000409161 DMXL1Q9Y485 3027 aa6.45□□□□□ -1.38
SHANK2-203ENST00000409161 CELSR1Q9NYQ6 3014 aa6.41□□□□□ -1.38
SHANK2-203ENST00000409161 SRRM2Q9UQ35 2752 aaKnown RBP6.4□□□□□ -1.38
SHANK2-203ENST00000409161 XP32Q5T750 250 aa6.4□□□□□ -1.39
SHANK2-203ENST00000409161 TPRXLQ17RH7 258 aa6.39□□□□□ -1.39
SHANK2-203ENST00000409161 ATMQ13315 3056 aa6.38□□□□□ -1.39
SHANK2-203ENST00000409161 DNAH14Q0VDD8 3507 aa6.38□□□□□ -1.39
SHANK2-203ENST00000409161 HRNRQ86YZ3 2850 aaPredicted RBP6.38□□□□□ -1.39
SHANK2-203ENST00000409161 MXRA5Q9NR99 2828 aa6.36□□□□□ -1.39
SHANK2-203ENST00000409161 VWFP04275 2813 aa6.35□□□□□ -1.39
SHANK2-203ENST00000409161 BRCA2P51587 3418 aa6.34□□□□□ -1.39
SHANK2-203ENST00000409161 PKD1L1Q8TDX9 2849 aa6.3□□□□□ -1.4
SHANK2-203ENST00000409161 KRTAP1-4P0C5Y4 121 aa6.28□□□□□ -1.4
SHANK2-203ENST00000409161 KRTAP21-3Q3LHN1 58 aa6.26□□□□□ -1.41
SHANK2-203ENST00000409161 CDH23Q9H251 3354 aa6.23□□□□□ -1.41
SHANK2-203ENST00000409161 VCANP13611 3396 aa6.22□□□□□ -1.41
SHANK2-203ENST00000409161 CFAP47Q6ZTR5 3102 aa6.22□□□□□ -1.41
SHANK2-203ENST00000409161 KRTAP10-10P60014 251 aa6.2□□□□□ -1.42
SHANK2-203ENST00000409161 TENM2Q9NT68 2774 aa6.19□□□□□ -1.42
SHANK2-203ENST00000409161 KRTAP13-4Q3LI77 160 aa6.18□□□□□ -1.42
SHANK2-203ENST00000409161 KRTAP13-3Q3SY46 172 aa6.14□□□□□ -1.43
SHANK2-203ENST00000409161 COL7A1Q02388 2944 aa6.14□□□□□ -1.43
SHANK2-203ENST00000409161 SPEGQ15772 3267 aa6.13□□□□□ -1.43
SHANK2-203ENST00000409161 A0A1B0GVY2 172 aa6.12□□□□□ -1.43
SHANK2-203ENST00000409161 KRTAP12-2P59991 146 aa6.07□□□□□ -1.44
SHANK2-203ENST00000409161 INE1O15225 51 aa6.06□□□□□ -1.44
SHANK2-203ENST00000409161 MEGF8Q7Z7M0 2845 aa6.02□□□□□ -1.45
SHANK2-203ENST00000409161 EYSQ5T1H1 3165 aa5.98□□□□□ -1.45
SHANK2-203ENST00000409161 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
SHANK2-203ENST00000409161 SPTBN5Q9NRC6 3674 aaKnown RBP5.97□□□□□ -1.45
SHANK2-203ENST00000409161 NBPF19A0A087WUL8 3843 aa5.93□□□□□ -1.46
SHANK2-203ENST00000409161 SZT2Q5T011 3432 aa5.91□□□□□ -1.46
SHANK2-203ENST00000409161 WDFY3Q8IZQ1 3526 aa5.91□□□□□ -1.46
SHANK2-203ENST00000409161 MYO15AQ9UKN7 3530 aa5.91□□□□□ -1.46
SHANK2-203ENST00000409161 ZFHX4Q86UP3 3567 aa5.9□□□□□ -1.47
SHANK2-203ENST00000409161 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
SHANK2-203ENST00000409161 FBN3Q75N90 2809 aa5.87□□□□□ -1.47
SHANK2-203ENST00000409161 ZFHX3Q15911 3703 aa5.83□□□□□ -1.48
SHANK2-203ENST00000409161 LOC400499M0QZD8 3231 aa5.8□□□□□ -1.48
SHANK2-203ENST00000409161 FBN1P35555 2871 aaKnown RBP5.79□□□□□ -1.48
SHANK2-203ENST00000409161 LAMA5O15230 3695 aa5.73□□□□□ -1.49
SHANK2-203ENST00000409161 ASPMQ8IZT6 3477 aa5.7□□□□□ -1.5
SHANK2-203ENST00000409161 SPENQ96T58 3664 aaKnown RBP5.69□□□□□ -1.5
SHANK2-203ENST00000409161 DMDP11532 3685 aa5.66□□□□□ -1.5
SHANK2-203ENST00000409161 SMG1Q96Q15 3661 aaKnown RBP5.65□□□□□ -1.5
SHANK2-203ENST00000409161 KRTAP3-1Q9BYR8 98 aa5.65□□□□□ -1.5
SHANK2-203ENST00000409161 KRTAP10-6P60371 365 aaPredicted RBP5.65□□□□□ -1.51
SHANK2-203ENST00000409161 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
SHANK2-203ENST00000409161 RELNP78509 3460 aa5.63□□□□□ -1.51
SHANK2-203ENST00000409161 OTOGQ6ZRI0 2925 aa5.61□□□□□ -1.51
SHANK2-203ENST00000409161 DCHS1Q96JQ0 3298 aa5.57□□□□□ -1.52
SHANK2-203ENST00000409161 KRTAP10-12P60413 245 aa5.56□□□□□ -1.52
SHANK2-203ENST00000409161 CSMD1Q96PZ7 3565 aa5.55□□□□□ -1.52
SHANK2-203ENST00000409161 TRRAPQ9Y4A5 3859 aa5.51□□□□□ -1.53
SHANK2-203ENST00000409161 VPS13CQ709C8 3753 aa5.47□□□□□ -1.53
SHANK2-203ENST00000409161 AKAP9Q99996 3911 aa5.43□□□□□ -1.54
SHANK2-203ENST00000409161 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
SHANK2-203ENST00000409161 KRTAP3-2Q9BYR7 98 aa5.37□□□□□ -1.55
SHANK2-203ENST00000409161 KRTAP3-3Q9BYR6 98 aa5.33□□□□□ -1.56
SHANK2-203ENST00000409161 ALMS1Q8TCU4 4167 aa5.25□□□□□ -1.57
SHANK2-203ENST00000409161 MUC3AQ02505 3323 aa5.25□□□□□ -1.57
SHANK2-203ENST00000409161 SVEP1Q4LDE5 3571 aa5.24□□□□□ -1.57
SHANK2-203ENST00000409161 CRCT1Q9UGL9 99 aa5.23□□□□□ -1.57
SHANK2-203ENST00000409161 CUBNO60494 3623 aa5.22□□□□□ -1.57
SHANK2-203ENST00000409161 CSMD3Q7Z407 3707 aa5.18□□□□□ -1.58
SHANK2-203ENST00000409161 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
SHANK2-203ENST00000409161 MT1HL1P0DM35 61 aa5.11□□□□□ -1.59
SHANK2-203ENST00000409161 KRTAP10-5P60370 271 aa5.08□□□□□ -1.6
SHANK2-203ENST00000409161 BSNQ9UPA5 3926 aa5.05□□□□□ -1.6
SHANK2-203ENST00000409161 CSMD2Q7Z408 3487 aa5.02□□□□□ -1.61
SHANK2-203ENST00000409161 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms