RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 FAM236AA0A1B0GUQ0 79 aa11.46□□□□□ -0.57
CHKB-201ENST00000406938 FAM236BA0A1B0GV22 79 aa11.46□□□□□ -0.57
CHKB-201ENST00000406938 A8MWP4 228 aa11.45□□□□□ -0.58
CHKB-201ENST00000406938 ATOX1O00244 68 aa11.44□□□□□ -0.58
CHKB-201ENST00000406938 HIST1H4AP62805 103 aaKnown RBP11.44□□□□□ -0.58
CHKB-201ENST00000406938 FP248Q71RG6 208 aaPredicted RBP11.44□□□□□ -0.58
CHKB-201ENST00000406938 K7EQZ3 153 aa11.43□□□□□ -0.58
CHKB-201ENST00000406938 Q8N9L7 120 aa11.43□□□□□ -0.58
CHKB-201ENST00000406938 PRR4Q16378 134 aa11.41□□□□□ -0.58
CHKB-201ENST00000406938 NDUFB1O75438 58 aa11.4□□□□□ -0.58
CHKB-201ENST00000406938 A0A1B0GVX0 72 aa11.39□□□□□ -0.59
CHKB-201ENST00000406938 IGHV6-1A0A0B4J1U7 121 aa11.38□□□□□ -0.59
CHKB-201ENST00000406938 PRR15Q8IV56 129 aa11.38□□□□□ -0.59
CHKB-201ENST00000406938 IGLV7-46A0A075B6I9 117 aa11.38□□□□□ -0.59
CHKB-201ENST00000406938 HERC1Q15751 4861 aa11.37□□□□□ -0.59
CHKB-201ENST00000406938 UQCRQO14949 82 aa11.33□□□□□ -0.6
CHKB-201ENST00000406938 A0A087WVE0 104 aa11.32□□□□□ -0.6
CHKB-201ENST00000406938 NOTCH2NLQ7Z3S9 236 aa11.31□□□□□ -0.6
CHKB-201ENST00000406938 C9orf92A6NGG3 77 aa11.29□□□□□ -0.6
CHKB-201ENST00000406938 C8orf17Q9NRJ1 99 aa11.29□□□□□ -0.6
CHKB-201ENST00000406938 C8orf87E5RJ46 101 aa11.28□□□□□ -0.6
CHKB-201ENST00000406938 COX7CP15954 63 aa11.28□□□□□ -0.6
CHKB-201ENST00000406938 SMIM20Q8N5G0 67 aa11.28□□□□□ -0.6
CHKB-201ENST00000406938 MMP24-AS1A0A0U1RRL7 71 aa11.27□□□□□ -0.6
CHKB-201ENST00000406938 LINC00313P59037 77 aa11.27□□□□□ -0.6
CHKB-201ENST00000406938 KRTAP13-3Q3SY46 172 aa11.27□□□□□ -0.61
CHKB-201ENST00000406938 SERP2Q8N6R1 65 aa11.25□□□□□ -0.61
CHKB-201ENST00000406938 TPRXLQ17RH7 258 aa11.24□□□□□ -0.61
CHKB-201ENST00000406938 HCG22E2RYF7 251 aa11.24□□□□□ -0.61
CHKB-201ENST00000406938 CCDC179H3BU77 68 aa11.24□□□□□ -0.61
CHKB-201ENST00000406938 WFDC13Q8IUB5 93 aa11.22□□□□□ -0.61
CHKB-201ENST00000406938 hDV103S1A0JD37 113 aa11.2□□□□□ -0.62
CHKB-201ENST00000406938 KRTAP16-1A8MUX0 517 aa11.2□□□□□ -0.62
CHKB-201ENST00000406938 CASC2Q6XLA1 102 aa11.2□□□□□ -0.62
CHKB-201ENST00000406938 HMCN2Q8NDA2 5059 aa11.19□□□□□ -0.62
CHKB-201ENST00000406938 TMEM254Q8TBM7 123 aa11.16□□□□□ -0.62
CHKB-201ENST00000406938 LPAP08519 4548 aa11.14□□□□□ -0.63
CHKB-201ENST00000406938 XP32Q5T750 250 aa11.14□□□□□ -0.63
CHKB-201ENST00000406938 MRPL34Q9BQ48 92 aaKnown RBP11.14□□□□□ -0.63
CHKB-201ENST00000406938 TRAV7A0A075B6U4 112 aa11.11□□□□□ -0.63
CHKB-201ENST00000406938 C20orf166-AS1Q96NR2 134 aa11.09□□□□□ -0.63
CHKB-201ENST00000406938 Q8N9P0 234 aaPredicted RBP11.08□□□□□ -0.64
CHKB-201ENST00000406938 A8MUU9 505 aa11.06□□□□□ -0.64
CHKB-201ENST00000406938 NDUFS5O43920 106 aa11.05□□□□□ -0.64
CHKB-201ENST00000406938 Q75L30 129 aa11.04□□□□□ -0.64
CHKB-201ENST00000406938 LRP2P98164 4655 aa11.03□□□□□ -0.64
CHKB-201ENST00000406938 RPL37P61927 97 aaKnown RBP11.01□□□□□ -0.65
CHKB-201ENST00000406938 TMEM258P61165 79 aa11□□□□□ -0.65
CHKB-201ENST00000406938 KLKP1Q107X0 134 aa10.96□□□□□ -0.65
CHKB-201ENST00000406938 NDUFC1O43677 76 aa10.95□□□□□ -0.66
CHKB-201ENST00000406938 TP53AIP1Q9HCN2 124 aa10.94□□□□□ -0.66
CHKB-201ENST00000406938 OCR1Q9BZK8 76 aa10.93□□□□□ -0.66
CHKB-201ENST00000406938 ATP11AUNQ6ZP68 121 aa10.91□□□□□ -0.66
CHKB-201ENST00000406938 ZCCHC13Q8WW36 166 aaKnown RBP10.91□□□□□ -0.66
CHKB-201ENST00000406938 C20orf197Q8N268 126 aa10.9□□□□□ -0.66
CHKB-201ENST00000406938 Q5W150 140 aa10.87□□□□□ -0.67
CHKB-201ENST00000406938 PCOTHQ58A44 107 aa10.87□□□□□ -0.67
CHKB-201ENST00000406938 RPS28P62857 69 aaKnown RBP10.85□□□□□ -0.67
CHKB-201ENST00000406938 SEC61BP60468 96 aaKnown RBP10.84□□□□□ -0.67
CHKB-201ENST00000406938 TRAV22A0A0B4J277 110 aa10.82□□□□□ -0.68
CHKB-201ENST00000406938 C5orf47Q569G3 176 aa10.82□□□□□ -0.68
CHKB-201ENST00000406938 ATP5EP56381 51 aaPredicted RBP10.81□□□□□ -0.68
CHKB-201ENST00000406938 H7BZZ5 65 aa10.78□□□□□ -0.68
CHKB-201ENST00000406938 CYSTM1Q9H1C7 97 aa10.78□□□□□ -0.68
CHKB-201ENST00000406938 H0Y9P7 68 aa10.77□□□□□ -0.68
CHKB-201ENST00000406938 SNURFQ9Y675 71 aa10.76□□□□□ -0.69
CHKB-201ENST00000406938 UBR4Q5T4S7 5183 aa10.76□□□□□ -0.69
CHKB-201ENST00000406938 MUC17Q685J3 4493 aa10.76□□□□□ -0.69
CHKB-201ENST00000406938 A0A0U1RQV1 116 aa10.74□□□□□ -0.69
CHKB-201ENST00000406938 FAM236DA0A1B0GTK5 79 aa10.74□□□□□ -0.69
CHKB-201ENST00000406938 FAM236CP0DP71 79 aa10.74□□□□□ -0.69
CHKB-201ENST00000406938 MP68P56378 58 aa10.73□□□□□ -0.69
CHKB-201ENST00000406938 H3BPC8 53 aa10.7□□□□□ -0.7
CHKB-201ENST00000406938 IGKV2D-30A0A075B6S6 120 aa10.69□□□□□ -0.7
CHKB-201ENST00000406938 IGKV2-30P06310 120 aa10.69□□□□□ -0.7
CHKB-201ENST00000406938 LINC00208Q96KT6 92 aa10.67□□□□□ -0.7
CHKB-201ENST00000406938 SPINK7P58062 85 aa10.66□□□□□ -0.7
CHKB-201ENST00000406938 C7orf65Q6ZTY9 151 aa10.66□□□□□ -0.7
CHKB-201ENST00000406938 C1orf64Q8NEQ6 169 aa10.66□□□□□ -0.7
CHKB-201ENST00000406938 KRTAP4-1Q9BYQ7 146 aa10.66□□□□□ -0.7
CHKB-201ENST00000406938 LOC101927531A0A1B0GV80 90 aa10.65□□□□□ -0.7
CHKB-201ENST00000406938 SERP1Q9Y6X1 66 aa10.63□□□□□ -0.71
CHKB-201ENST00000406938 CYP4F30PQ9H0H9 118 aa10.6□□□□□ -0.71
CHKB-201ENST00000406938 RNF213Q63HN8 5207 aa10.56□□□□□ -0.72
CHKB-201ENST00000406938 MUC2Q02817 5179 aa10.55□□□□□ -0.72
CHKB-201ENST00000406938 HRES1P13985 223 aa10.51□□□□□ -0.73
CHKB-201ENST00000406938 SPANXA2-OT1Q8N9U9 137 aa10.46□□□□□ -0.74
CHKB-201ENST00000406938 MPLKIPQ8TAP9 179 aa10.43□□□□□ -0.74
CHKB-201ENST00000406938 SMIM26A0A096LP01 95 aa10.42□□□□□ -0.74
CHKB-201ENST00000406938 C4orf26Q17RF5 130 aa10.42□□□□□ -0.74
CHKB-201ENST00000406938 RBM12B-AS1Q9P1G2 102 aa10.38□□□□□ -0.75
CHKB-201ENST00000406938 COX6B2Q6YFQ2 88 aa10.33□□□□□ -0.76
CHKB-201ENST00000406938 KRTAP19-2Q3LHN2 52 aa10.3□□□□□ -0.76
CHKB-201ENST00000406938 KRTAP3-1Q9BYR8 98 aa10.27□□□□□ -0.77
CHKB-201ENST00000406938 DMAC1Q96GE9 116 aa10.21□□□□□ -0.78
CHKB-201ENST00000406938 LCE2CQ5TA81 110 aa10.2□□□□□ -0.78
CHKB-201ENST00000406938 A8MUN3 132 aa10.18□□□□□ -0.78
CHKB-201ENST00000406938 H1FX-AS1Q4G0G2 97 aa10.18□□□□□ -0.78
CHKB-201ENST00000406938 V9GYY9 64 aa10.18□□□□□ -0.78
CHKB-201ENST00000406938 FAT4Q6V0I7 4981 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms