RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 NOTCH2NLQ7Z3S9 236 aa9.22□□□□□ -0.93
PTCHD3P3-201ENST00000403073 MUC2Q02817 5179 aa9.21□□□□□ -0.93
PTCHD3P3-201ENST00000403073 ETDBQ3ZM63 59 aa9.21□□□□□ -0.94
PTCHD3P3-201ENST00000403073 KRTAP4-1Q9BYQ7 146 aa9.21□□□□□ -0.94
PTCHD3P3-201ENST00000403073 A0A1B0GVX0 72 aa9.19□□□□□ -0.94
PTCHD3P3-201ENST00000403073 A0A1B0GV90 55 aa9.18□□□□□ -0.94
PTCHD3P3-201ENST00000403073 Q75L30 129 aa9.18□□□□□ -0.94
PTCHD3P3-201ENST00000403073 KRTAP16-1A8MUX0 517 aa9.16□□□□□ -0.94
PTCHD3P3-201ENST00000403073 A8MWP4 228 aa9.15□□□□□ -0.94
PTCHD3P3-201ENST00000403073 NDUFB1O75438 58 aa9.15□□□□□ -0.94
PTCHD3P3-201ENST00000403073 C20orf166-AS1Q96NR2 134 aa9.15□□□□□ -0.94
PTCHD3P3-201ENST00000403073 IGKV3D-7A0A0C4DH55 119 aa9.14□□□□□ -0.95
PTCHD3P3-201ENST00000403073 A8MUU9 505 aa9.14□□□□□ -0.95
PTCHD3P3-201ENST00000403073 Q6ZVQ6 151 aa9.14□□□□□ -0.95
PTCHD3P3-201ENST00000403073 C8orf87E5RJ46 101 aa9.13□□□□□ -0.95
PTCHD3P3-201ENST00000403073 ATP11AUNQ6ZP68 121 aa9.12□□□□□ -0.95
PTCHD3P3-201ENST00000403073 LINC00846Q9NV44 126 aa9.12□□□□□ -0.95
PTCHD3P3-201ENST00000403073 BPY2O14599 106 aa9.1□□□□□ -0.95
PTCHD3P3-201ENST00000403073 PRR15Q8IV56 129 aa9.09□□□□□ -0.95
PTCHD3P3-201ENST00000403073 C8orf17Q9NRJ1 99 aa9.08□□□□□ -0.96
PTCHD3P3-201ENST00000403073 UBL5Q9BZL1 73 aa9.06□□□□□ -0.96
PTCHD3P3-201ENST00000403073 K7EQZ3 153 aa9.05□□□□□ -0.96
PTCHD3P3-201ENST00000403073 A0A0U1RQV1 116 aa9.03□□□□□ -0.96
PTCHD3P3-201ENST00000403073 Q8N9L7 120 aa9.02□□□□□ -0.97
PTCHD3P3-201ENST00000403073 MMP24-AS1A0A0U1RRL7 71 aa9□□□□□ -0.97
PTCHD3P3-201ENST00000403073 Q8N9P0 234 aaPredicted RBP8.98□□□□□ -0.97
PTCHD3P3-201ENST00000403073 FAT4Q6V0I7 4981 aa8.97□□□□□ -0.97
PTCHD3P3-201ENST00000403073 hDV103S1A0JD37 113 aa8.95□□□□□ -0.98
PTCHD3P3-201ENST00000403073 TMEM254Q8TBM7 123 aa8.95□□□□□ -0.98
PTCHD3P3-201ENST00000403073 ACYP1P07311 99 aa8.94□□□□□ -0.98
PTCHD3P3-201ENST00000403073 MRPL34Q9BQ48 92 aaKnown RBP8.94□□□□□ -0.98
PTCHD3P3-201ENST00000403073 WFDC13Q8IUB5 93 aa8.92□□□□□ -0.98
PTCHD3P3-201ENST00000403073 FAM240AA0A1B0GVK7 77 aa8.91□□□□□ -0.98
PTCHD3P3-201ENST00000403073 KRTAP19-2Q3LHN2 52 aa8.91□□□□□ -0.98
PTCHD3P3-201ENST00000403073 ZCCHC13Q8WW36 166 aaKnown RBP8.91□□□□□ -0.98
PTCHD3P3-201ENST00000403073 CXCL6P80162 114 aa8.89□□□□□ -0.99
PTCHD3P3-201ENST00000403073 LCE2CQ5TA81 110 aa8.89□□□□□ -0.99
PTCHD3P3-201ENST00000403073 CASC2Q6XLA1 102 aa8.89□□□□□ -0.99
PTCHD3P3-201ENST00000403073 NDUFS5O43920 106 aa8.87□□□□□ -0.99
PTCHD3P3-201ENST00000403073 LCE2AQ5TA79 106 aaPredicted RBP8.85□□□□□ -0.99
PTCHD3P3-201ENST00000403073 HCG22E2RYF7 251 aa8.84□□□□□ -0.99
PTCHD3P3-201ENST00000403073 COX6B2Q6YFQ2 88 aa8.8□□□□□ -1
PTCHD3P3-201ENST00000403073 SPINK7P58062 85 aa8.79□□□□□ -1
PTCHD3P3-201ENST00000403073 ATP5EP2Q5VTU8 51 aa8.77□□□□□ -1.01
PTCHD3P3-201ENST00000403073 J3QR89 54 aa8.76□□□□□ -1.01
PTCHD3P3-201ENST00000403073 HRES1P13985 223 aa8.76□□□□□ -1.01
PTCHD3P3-201ENST00000403073 Q5W150 140 aa8.76□□□□□ -1.01
PTCHD3P3-201ENST00000403073 LINC00643Q86TS7 51 aa8.76□□□□□ -1.01
PTCHD3P3-201ENST00000403073 MT1HP80294 61 aa8.75□□□□□ -1.01
PTCHD3P3-201ENST00000403073 HIST1H4AP62805 103 aaKnown RBP8.73□□□□□ -1.01
PTCHD3P3-201ENST00000403073 MPLKIPQ8TAP9 179 aa8.7□□□□□ -1.02
PTCHD3P3-201ENST00000403073 RBM12B-AS1Q9P1G2 102 aa8.68□□□□□ -1.02
PTCHD3P3-201ENST00000403073 FAM236DA0A1B0GTK5 79 aa8.66□□□□□ -1.02
PTCHD3P3-201ENST00000403073 FAM236CP0DP71 79 aa8.66□□□□□ -1.02
PTCHD3P3-201ENST00000403073 IGKV2D-30A0A075B6S6 120 aa8.65□□□□□ -1.02
PTCHD3P3-201ENST00000403073 A0A087WVE0 104 aa8.65□□□□□ -1.02
PTCHD3P3-201ENST00000403073 IGKV2-30P06310 120 aa8.65□□□□□ -1.02
PTCHD3P3-201ENST00000403073 TP53AIP1Q9HCN2 124 aa8.64□□□□□ -1.03
PTCHD3P3-201ENST00000403073 M0R2T5 61 aa8.61□□□□□ -1.03
PTCHD3P3-201ENST00000403073 C7orf65Q6ZTY9 151 aa8.6□□□□□ -1.03
PTCHD3P3-201ENST00000403073 K7ERU9 68 aa8.59□□□□□ -1.03
PTCHD3P3-201ENST00000403073 FLGP20930 4061 aaPredicted RBP8.57□□□□□ -1.04
PTCHD3P3-201ENST00000403073 KRTAP10-6P60371 365 aaPredicted RBP8.52□□□□□ -1.05
PTCHD3P3-201ENST00000403073 UQCRQO14949 82 aa8.5□□□□□ -1.05
PTCHD3P3-201ENST00000403073 TRAV22A0A0B4J277 110 aa8.49□□□□□ -1.05
PTCHD3P3-201ENST00000403073 LORP23490 312 aaPredicted RBP8.49□□□□□ -1.05
PTCHD3P3-201ENST00000403073 MT-ATP8P03928 68 aa8.48□□□□□ -1.05
PTCHD3P3-201ENST00000403073 C4orf26Q17RF5 130 aa8.48□□□□□ -1.05
PTCHD3P3-201ENST00000403073 H0Y9P7 68 aa8.44□□□□□ -1.06
PTCHD3P3-201ENST00000403073 CYP4F30PQ9H0H9 118 aa8.44□□□□□ -1.06
PTCHD3P3-201ENST00000403073 H1FX-AS1Q4G0G2 97 aa8.43□□□□□ -1.06
PTCHD3P3-201ENST00000403073 OCR1Q9BZK8 76 aa8.43□□□□□ -1.06
PTCHD3P3-201ENST00000403073 IMUPQ9GZP8 106 aa8.42□□□□□ -1.06
PTCHD3P3-201ENST00000403073 LOC101927531A0A1B0GV80 90 aa8.41□□□□□ -1.06
PTCHD3P3-201ENST00000403073 SCGB1A1P11684 91 aa8.4□□□□□ -1.06
PTCHD3P3-201ENST00000403073 ATOX1O00244 68 aa8.39□□□□□ -1.07
PTCHD3P3-201ENST00000403073 KRTAP3-1Q9BYR8 98 aa8.37□□□□□ -1.07
PTCHD3P3-201ENST00000403073 C1orf64Q8NEQ6 169 aa8.36□□□□□ -1.07
PTCHD3P3-201ENST00000403073 LINC00208Q96KT6 92 aa8.34□□□□□ -1.07
PTCHD3P3-201ENST00000403073 MP68P56378 58 aa8.33□□□□□ -1.08
PTCHD3P3-201ENST00000403073 C5orf47Q569G3 176 aa8.33□□□□□ -1.08
PTCHD3P3-201ENST00000403073 KRTAP9-8Q9BYQ0 159 aa8.33□□□□□ -1.08
PTCHD3P3-201ENST00000403073 KRTAP9-2Q9BYQ4 174 aa8.32□□□□□ -1.08
PTCHD3P3-201ENST00000403073 FAM236AA0A1B0GUQ0 79 aa8.29□□□□□ -1.08
PTCHD3P3-201ENST00000403073 FAM236BA0A1B0GV22 79 aa8.29□□□□□ -1.08
PTCHD3P3-201ENST00000403073 LCE2DQ5TA82 110 aaPredicted RBP8.28□□□□□ -1.08
PTCHD3P3-201ENST00000403073 KLKP1Q107X0 134 aa8.27□□□□□ -1.09
PTCHD3P3-201ENST00000403073 MT2AP02795 61 aa8.25□□□□□ -1.09
PTCHD3P3-201ENST00000403073 H3BPC8 53 aa8.23□□□□□ -1.09
PTCHD3P3-201ENST00000403073 TRAV7A0A075B6U4 112 aa8.21□□□□□ -1.1
PTCHD3P3-201ENST00000403073 SMIM20Q8N5G0 67 aa8.21□□□□□ -1.1
PTCHD3P3-201ENST00000403073 S4R3F8 94 aa8.21□□□□□ -1.1
PTCHD3P3-201ENST00000403073 MT1FP04733 61 aa8.19□□□□□ -1.1
PTCHD3P3-201ENST00000403073 LCA10Q71F78 164 aa8.18□□□□□ -1.1
PTCHD3P3-201ENST00000403073 KRTAP10-10P60014 251 aa8.16□□□□□ -1.1
PTCHD3P3-201ENST00000403073 KRTAP9-6A0A140TA67 174 aa8.11□□□□□ -1.11
PTCHD3P3-201ENST00000403073 CSAG1Q6PB30 78 aa8.11□□□□□ -1.11
PTCHD3P3-201ENST00000403073 KRTAP3-3Q9BYR6 98 aa8.1□□□□□ -1.11
PTCHD3P3-201ENST00000403073 A8MUN3 132 aa8.09□□□□□ -1.11
PTCHD3P3-201ENST00000403073 SERP2Q8N6R1 65 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms